Array 1 2813-1976 **** Predicted by CRISPRDetect 2.4 *** >NZ_SODA01000013.1 Halanaerobium saccharolyticum strain MSL9.2 Ga0213558_113, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2812 37 100.0 35 ..................................... GAAAAAGAAATAAATAATGAGCTGCAGGGGGCTAG 2740 37 100.0 34 ..................................... CCGATTTCTAAATCATAATAGAATGTATTATCAT 2669 37 100.0 37 ..................................... GCAGCTTATAATGAAGGACTACTATCAGGTAAATGGG 2595 37 100.0 36 ..................................... TAACTTACTGCATTAATCCACTTGCTGAATTAATAG 2522 37 100.0 36 ..................................... ACATCTGCAGGGAGTGGCACAACATCATAAGTAGGG 2449 37 100.0 36 ..................................... GATAAGCATCTTTCCCATAATATTTCCGATTAACCT 2376 37 100.0 36 ..................................... TAAAGTTCCCAGTATGGATCATCTGAGAAAAACTTG 2303 37 100.0 36 ..................................... TTCCTCCTTAAGTAATTTAAATAAAAACAGGCCATT 2230 37 100.0 36 ..................................... TAACCAACCATATTTATTCCCTGGCTGAGAGGAAAT 2157 37 100.0 35 ..................................... ATTTCTATTTTCTCTAATGCTAAATCACTGCTTGA 2085 37 100.0 36 ..................................... TACTGCTGCTGGCCCGGATAATTATATTTTTTAAGC 2012 37 94.6 0 ....G...............................T | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 99.5 36 GTCAAAAGACTAAATCCACTACAACAAGGATTGAAAC # Left flank : GTATTTGCAGGATCTTTTGCAGCCAGTTTTGTTAGAGAAAGAAATCTAAAATCTGCTATAGAATTTGCCATTAAAGCAGCGGCCTATTCAGTAACTATCAAGGGAGCTCAGAGCTCTATCCCCGGTCAAAAGGATTTAGATCAGTTTCTCAAAGAAAGGATTAAATAAAATTATTTTCTGATTTTAATAGTCGGCTATAATTTAATTAGTATATAAATTTGATAGTCAAAAATAAATATTTAAGACAAAAAAGAGGATTTAAGAGGGCTATATTTAAATATATAATTAAGAAATAATTTTATTCTGAGACAAAATTATTTAAGAGTAAAAATTTGAACCTTGATAATTATTGAAATAGCAATTTGGTCAGGATAGTCAAAGTCGCGGCATTTTCTTAAAAACAGCTATTTTGAGCCGTTTTTTGAGTCTGAAATGTTAATCACCTGTTCCAGGCAAAGTGGTTTGAAAGCTGTTAAAATAGGATTTGTAAAGCTTGACGG # Right flank : TTACACTTTGATTGATCCTAAACAAAGAAAAATAGGAGGAATTTGATGGATGATTTTAAGATGTTATGTTTAGATATTGATGGGACACTACTTAATTCAGAGCATCAAATTAGTTCCAAAACTAAAAGAATGATTAAAGAGGCTGTCAAAAGAGGAATCTTAGTGATCTTAGTATCAGCACGGATGCCCAAGGGGATCTGGTTTTTACAGGATGAACTGGAGATCGATCAAGCAATAATTTCATATAATGGTGCATTAGTTATTGAAAAAAATTCAGATTATTTATTAAATTTAACTATAGCCAAAAGGGATCTAAAAGATATATATAGTTTAGCCAGACATTTAGATGTACATATCAGCTTATATCAAGATGATCACTGGTATATAGAAAACTTAGATCATTGTGATTTTGCAAATTAATCCAGTTAAATTATTCAGATTAAATCAGCCTAAATTAGCTAAAATTACAGCATAATTTTCAAATTAAATTAGTAAAAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAAGACTAAATCCACTACAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA //