Array 1 6587048-6583862 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN125580.1 Paenibacillus macerans strain 8244 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 6587047 32 100.0 33 ................................ ATCGTCTCCCTTATTTGTCGTATGTACGACTTG 6586982 32 100.0 34 ................................ AGCCCGGCAACCGATGGAGGCTATTTGGCGACAG 6586916 32 100.0 35 ................................ GGTTAATCCGGAAGCAATATCACAACTGGAACGAA 6586849 32 100.0 35 ................................ GCGTCAGCATACAGCAGTTCGGACGCGCGGTCCCA 6586782 32 100.0 36 ................................ GAGAATGGGCGCGTTCCGTTCGAAGTCCCACTCGTC 6586714 32 100.0 35 ................................ TTGCGCGGCAATAGGGGAGGCGTATGACAATGAGT 6586647 32 100.0 36 ................................ CGACATATGGCATTATTTGATGGGGCAAGGATTTGC 6586579 32 100.0 34 ................................ CCGTAATGCCGGTTCAAATAGCACATAAACCTCG 6586513 32 100.0 37 ................................ CAAGTAGCCTATCGCCTGCATCTGTGCAGGCGTAAGC 6586444 32 100.0 35 ................................ GGGGCATTTCGATCCCATCCCCTTACCAACCATAA 6586377 32 100.0 34 ................................ AGATCATCGACGACATAGGCGGTGAGTATGATGG 6586311 32 100.0 38 ................................ GGAGCAGTTGCGGCGTCAGGTGGTCCATCTGCTCAAAA 6586241 32 100.0 36 ................................ GGATACTTCGGATAAAGGGTACACCTATACACCCGG 6586173 32 100.0 35 ................................ TGGAGAATGAACTGTCAGCTCCAGTTTTGCCTGAT 6586106 32 100.0 35 ................................ GAAACCGAGTGTACCGGGTAATTTCGGAGTCGTAG 6586039 32 100.0 37 ................................ AGGAAGGACTAAATCCTGCGGGTGTTTAAGGAGACAA 6585970 32 100.0 34 ................................ TTTGACTGTGGTGATAGCTACTCCAGTGTTTACA 6585904 32 100.0 34 ................................ ACGCGGTTTGCAGAAATAGCGATCTTCCCAGTCG 6585838 32 100.0 34 ................................ TCCAAACTCATGAACGGCTTGCTGTGGCTTCTCC 6585772 32 100.0 34 ................................ GCAAACGTCATTGTCCCCTTTTTGCAGTTCTTCG 6585706 32 100.0 35 ................................ CAAGCAACACTCATTAAGTTTCTCATTCCGATCAT 6585639 32 100.0 35 ................................ ATCAAACGGGCGTCTATGGGAAAAGAAATCAAAAT 6585572 32 100.0 35 ................................ GATTTGATTTCGAGACCAACGCGAATCGTCCGGCC 6585505 32 100.0 34 ................................ CCGACTTAAAAATATACCCTGTGTTCTCGATCAT 6585439 32 100.0 37 ................................ CGAAGTCCGCCGGCGGAAGCTGCGCGAATTTCTCCGC 6585370 32 100.0 34 ................................ CCGGAACCGCCCCACCAGTCACTGATTGTCTTTT 6585304 32 100.0 37 ................................ AGCTGATTCCGTCCGGGATGAAGTTCCCGAACCGAAG 6585235 32 100.0 36 ................................ TCTGAAATACTTGTTATCGCAATAATATCTGGTATA 6585167 32 100.0 35 ................................ TTAATAGGAGGACTTATGTATGAATCTCGTACCGA 6585100 32 100.0 33 ................................ AAGCAGCCTTAGAAATGCTGCATCCGACCGGGA 6585035 32 100.0 35 ................................ CGTAATTGAATCCGTTTATGATCAGCCGATTGTTC 6584968 32 100.0 35 ................................ CTAATTGGGAGAAACACCAAAATACTGAGGCTCTT 6584901 32 100.0 34 ................................ TAATAGTTTCACGCGCTCCCCTCCCTTTACTTCT 6584835 32 100.0 33 ................................ GCTTGATTCTCTGGACTACCGGGTAAATGATCT 6584770 32 100.0 35 ................................ CTCGATCTGTTTGGTCATGGCCTGGGCGATTTCCT 6584703 32 100.0 35 ................................ AGAATGGCGGCGTGGTTCCGGCAGATTTGGCCGGT 6584636 32 100.0 36 ................................ ATCGTGTCATGCACCTTTAAGACAGTGCTGACCAGC 6584568 32 100.0 34 ................................ GTCAGTGCAGGCAATCATCCAGTTTACGGGCATG 6584502 32 100.0 38 ................................ CGGCGATAGCGGAAGAGGCGGTTTATCCGAAAAGGATC 6584432 32 100.0 35 ................................ CGTACGCCCCGTATACCTATGTAGAACCAGCAAGC 6584365 32 100.0 36 ................................ TCTAACGGCAAAATCCGAACGGAAGTATTCGAAGCA 6584297 32 96.9 33 ......................A......... CCGAACATGTTGCCCGGCATCCGTATGCCGCGA 6584232 32 100.0 36 ................................ AAAGGTCGTCAGGCTATCGCTGTACCAGTTCTTGCC 6584164 32 100.0 35 ................................ GTCCTTAGCGTGGCCCAGTTGCTTTCGGATGTCAT 6584097 32 100.0 36 ................................ GAAAGTGTTCGGGTTTATTGCTGACGATGTAGTCCC 6584029 32 96.9 36 ............A................... TTCGATCAATTCTTTAAAACTCCAAAACCGTATTGT 6583961 32 93.8 36 ..........C.A................... TTTATCCGGAGCACAAGAAATTTCAAACGATAATTC 6583893 32 90.6 0 ..........C.A.........A......... | ========== ====== ====== ====== ================================ ====================================== ================== 48 32 99.5 35 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Left flank : CGTAAAGCATTTAACTGGCCGAAGCCAAAGAATTCCGAAAAAATAAACGTAGAACAGACGGCAGCAACGGAAATTGAGGACATAAAGAAGCAGTACGATTTGCAGAATTATCGGGTGTGCGTTAACCTGGACAGCAAGAGCGGGGAAAAAGAAGAAATCTCGCTGCTTTCTCTAACGTTTCAACTAAATCAGCTTTTGATGCTGATTAATAACCCGATGTTATTCCCACATAAAGCCTATGTAGATATGTTTAACGAGCGGTATACGAAGGAGTAGCCTTGGAGCATGAACCGGGAAGTAATCGTTCTCTAGCAAAACGGAATATAGTGGCGGTGCGAACCCCAAGCTCACATAAAAATCCCGGGACATTCGCACCTCTCGCCCAGCGCGGGATTTCGGGATTTTACGTCAATACTTACCCCATTTATTAACCATAAAAAAGGGGATTCGCACTAAAGCGTTTTCAAACCCTTGCTGGATGCGGGGTTGAAATGATCGCG # Right flank : AATTTTACGCTGCTCATTTCTTCCATTTTGTGTCGCTCCCTACGAGGGGCTAGAATGGGATTTACTTTCCCAAGAAAGAAAAAAGACTCGCTAACTGGGTACGTAAGAACGAGCCCATAGGTTAATTTTGTACACATGAAGGAGAACCAGCTCACCTACTGTCCAAAAATTCTGAAGAGAATTTCTGGACAGTGAGCCCTTTTACATAAAAATAAGGAATTGCATTTTCGTATAAATTTAAAAAGAAGAACTACGAGTCTGCCTAAAAATCGATGCTTGACTGACGGGTTAGCCTCGAATGATCGATCCATCCGAAATATTTTCTACGCTAACGGTTGTCAGCGCGCCTATTCGGCCGAAAATCGGGGGGTTTCTTTTCTAAGGGTTGTATATGCACTAGCGTTGCAAGAACACTAACATCAATTTTCAGCAAAACCCACATTTGGATTATTGAAACTATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 6599109-6595608 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN125580.1 Paenibacillus macerans strain 8244 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 6599108 32 100.0 34 ................................ CAACAATCAGGTCTTTTACGAAGATATCGACGAG 6599042 32 100.0 36 ................................ CGCCAGACTGCACCTCCACCGTGGTTGCGTTATACA 6598974 32 100.0 34 ................................ ACAGGACGGGATGGTCAATCTCGCACCAATAACC 6598908 32 100.0 34 ................................ ATTAAATCCACCTCACGTTGTGCGAACATTTGTT 6598842 32 100.0 34 ................................ GTTACGTTATTCAAACGGGGCGGATGGAGCCGAT 6598776 32 100.0 36 ................................ CGATGGATACGCCAATCATCACGCGCTGGGCTGATC 6598708 32 100.0 34 ................................ GGATCATCTTTCTTGTAGTAAACCGGCACTGCGA 6598642 32 100.0 34 ................................ ACCTGATCTTGGTATATGGTGCCCTGGTACAAAT 6598576 32 100.0 36 ................................ TTTCAGGACGAAATGCTTGAAAGACTTACACCAGAA 6598508 32 100.0 33 ................................ CGAAGTTTTATGCATTTTCGCTGCATAATCGTA 6598443 32 100.0 36 ................................ CTCACAATCAACGTGTAAAGGGCGGTGAAATAGATG 6598375 32 100.0 34 ................................ GCCGCTTAGTAGGCGGTTGAATACCGCGCGTGCC 6598309 32 100.0 34 ................................ AATAATGCTGCCATTGACGAACGTCCACTCGTGC 6598243 32 100.0 36 ................................ TGCCGCCACCCATAGCGGATTAGGAGGATAACCATG 6598175 32 100.0 35 ................................ CGCTTCTGACCGATTGTATGTTCTAACCGTCTTAA 6598108 32 100.0 36 ................................ TACGCGGACGGCGTCGGCCTGTTTCGCGGCGTTATC 6598040 32 100.0 34 ................................ TAAAATTTTCGTGCCACGGAAAAGGGGCGGGGGA 6597974 32 100.0 33 ................................ TTGATACCAATATTACACCATAATTACACCAAT 6597909 32 100.0 39 ................................ AGTGATCTCGTCCATCGTCTCCTTGGTCATGTCGAACTG 6597838 32 100.0 33 ................................ TCCCTTGGCTCCCTTTGACCCCTTCGGAAGTGT 6597773 32 100.0 35 ................................ CGACGCGATCCGGATGAACGACTTTTATGACCAGC 6597706 32 100.0 35 ................................ TGTCCCTGTGCAGGAAGCCGGGAGGGTTTGCCGTC 6597639 32 100.0 35 ................................ ACGTGGATAGAGTTTATCTTTGATCTCGTTATAGG 6597572 32 100.0 37 ................................ ATCTTTGAATGCGGATATTAACCTTGAAGAACACATC 6597503 32 100.0 35 ................................ TATATCCGTATAGGGGCTAGCCCCGCTCACGCTTT 6597436 32 100.0 35 ................................ ATGATTTTGCCGCCAGTTACGCGGATAAAGTAACG 6597369 32 100.0 34 ................................ AATATGGTTGTTTACGGCGTTTATGGCAATCAAG 6597303 32 100.0 36 ................................ CAAGCGGAGCGCGACCGGATGCTCGAATTACTTGCC 6597235 32 100.0 33 ................................ CTCAAACTTAGCGTCAAGTTCTGCGGACATGTC 6597170 32 100.0 35 ................................ CAAGACAATGCGGCTGATTGTAAACCTCGTAAATC 6597103 32 100.0 34 ................................ CAGCCCGCTATATGGATTACGGTTTGGCAAAGGC 6597037 32 96.9 33 .............C.................. TTCGGCGTTTGTGCAAGAATATTGAACTTGATT 6596972 32 96.9 36 .............C.................. ATCTGATTTCTTTATCGGGAGCACCTATCGAGACAA 6596904 32 96.9 37 .............C.................. CGCAGCGCTCACAACGCCCTCCAGACCGTTCTAGTGC 6596835 32 96.9 34 .............C.................. TTGAGCACTCTTTTGGGATTGTGCTTTGCGTGCT 6596769 32 96.9 33 .............C.................. TTAAGAAAGTCTTAGAGGAATCGTTGGTGCACA 6596704 32 96.9 33 .............C.................. GATGTAAACGGCCCTGCGCTCATCATGACGAAT 6596639 32 96.9 33 .............C.................. GGTTTGTCCGCCATTTGCAAACGCTTCCTTATA 6596574 32 96.9 33 .............C.................. TACCATGGTATCACCCCTCTATAAAATCAAATA 6596509 32 96.9 38 .............C.................. TCGACGAGATCGAAGAGAAAGCGCCGGAAGCGCCGCAG 6596439 32 96.9 35 .............C.................. ATCGAAAATAACCACGCTGCCATGCACATCCGCGA 6596372 32 96.9 37 .............C.................. ATTGGCATGTTTTAGCCCTCCTTAACCTATAGCAACG 6596303 32 96.9 34 .............C.................. GTCGATATTGGCCGTGATGTTTGTAGCTTTACCG 6596237 32 96.9 34 .............C.................. TGATTTGGCCAGCAAGAAAAAGTATTCATGAGCC 6596171 32 96.9 35 .............C.................. TTCTGAAGATCATTACCCTCATGTGATTGGAGTGT 6596104 32 96.9 36 .............C.................. GTAGCTCTAGGGCTAATTACACTGGTAGCCAAAGTC 6596036 32 96.9 34 .............C.................. AGGTCAAGCCACACCAAACCTTTGCTTAAACATC 6595970 32 96.9 35 .............C.................. TTGCCGGGATCATTGTTTTTTGACCTATTACACCA 6595903 32 96.9 33 .............C.................. GTTAATAATCTTGATGTTGCGTTGCTTGAGATC 6595838 32 96.9 35 .............C.................. GAGTAGGGTTTCCGCACATTACAGCTTATTGAATT 6595771 32 96.9 33 .............C.................. ATCCATACTGAATGCACCGAGAAAGTCTGTATA 6595706 32 100.0 35 ................................ GCCGACGGTCGCATATGTATGCCCATCCCCAAGCG 6595639 32 96.9 0 ........................C....... | ========== ====== ====== ====== ================================ ======================================= ================== 53 32 98.8 35 GTCGCTCCCTATGTGGGAGCGTGGATTGAAAG # Left flank : CGCCAAATGATCGAGGAATTAATGGATTTATATAGCGGCAAACCGGCCTTTTTGGACGAGTTGAGCCAAATCCATGACGGGTTAAATTAATGAGATCCTCCCTTGGGGAGTTTTTTGTTCAATTTAGAAGTCGTCGCCGCTTGGCTATACGGCCAAATTGACCGATTATTCATGGATGGATATTAGGAAATTTGTGGGGGAAAAAGGTTTTTGGGCGATTGGGATCGAAATAGGTGCGTAAGGCTATGTACCTTTAACGAGAAAGATACGACGATGTAGCCTTGAAGTAATGAAGAGTAATCAATTGGTTGGTAAAAGCGGGAAAGAACAGCGGTGCGAACCCCAAGCTCACATAAAATCCCCGGGACATTCGCACCTCTTGTCTGGCGTGGGATTGCGGGATATTGCGGCTTTGTTTAACTTGTTTTTAAACCATAAAAAGGGGATTCGCACTAAAGCGTTTCCAAACCTTTGCTGGATGCGGGGGTTAGGTGGACGGA # Right flank : ATGTAAAATCAATACCAAGTTGCCCCTTAAGATAACGCCACTCTCAAGCCTCAGCGTTCCTCTCTGCACGAGAGGGTGGAATGAAAGAAGGTCTGATTCTTTGCGATTACCAGGATCAATAGCCACTTCCCACATAGGAGTATCTTAATGAAAATTGCCTTTGGTTAAAGGCTTTTTTTGTACACTCAAGGAATGTGGAAATGTTCGCGTGTTTAATGTGGAGTGATTTTAGAGTGAAGCCCCCTCCTTATCAATTGCCTAGATGATTACTCCTTCGCTTAGAGAGAGGAGATAGATAAAGTTAAGGGAGGTTATGGAATTAACGGATTTATAAACGGCAAACCGGCCTTTTAGATGAATTGAGCCCAATCCACGATTAGACAAATTATTGAGCTCCTCCCTCGCGGGGGGAGTTTTTTGCTTAACTTGGAAATCACTGTAGAAATCCGCCCACAAAGGCAATCACAACCCTCAGATTCGTTTCTCACTCTTGCTTTAAG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGTGGGAGCGTGGATTGAAAG # Alternate repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 3 7137829-7133793 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN125580.1 Paenibacillus macerans strain 8244 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 7137828 33 100.0 35 ................................. TGCTCAAATACTACGGCAGCGGCGACAGCGGTCAG 7137760 33 97.0 33 ................................G CGTTGCTGCATCTCCTGCTGCACCTTTTGGTCG 7137694 33 100.0 33 ................................. TTTGGCGTCACCGCTGTATCTGCTGCTTTAGGC 7137628 33 97.0 34 ................................C TCGCTCTGACTTATCTGATGTAGTCGTGGAAGGG 7137561 33 100.0 34 ................................. GGAAGTAAAACAGCATTTAGACGGCTGGACAATA 7137494 33 97.0 35 ................................C TTGTGACTTATACCCATCAAGCCGGGATTGACCGC 7137426 33 97.0 35 ................................C CCTGTTTGCGGCTTGATTTTGCAATATATATCAAG 7137358 33 100.0 32 ................................. TGGATTTCTTCCACCACGTCTTTTAGGAGCAT 7137293 33 97.0 32 ................................C GGACGGACTCCAGCGTGATGCGAAACATTGCT 7137228 33 97.0 33 ................................G GTGAATCCCGTTGCCGGGAATCTTAAAAACGCT 7137162 33 97.0 34 ................................A GCGGATGTGCGAGGATGGCCGACTTAAAGCCAAG 7137095 33 97.0 36 ................................A GATATTTGGCGTAAGGCAGGTTGGAACCGACCTCAA 7137026 33 97.0 34 ................................G CAATTACGGGACCAAACTGGCGCGGTCGTATTGA 7136959 33 97.0 32 ................................A TTAATGGCAGCGTGATTGAGCTTGCCTATTGG 7136894 33 97.0 32 ................................A AATGCACATGCTGCCGAAAAGGCCGATCTATC 7136829 33 97.0 33 ................................G TTGATGATCTGCAATTGACCGAGATCAAGCGCC 7136763 33 100.0 34 ................................. CCGTTTGTAGTCGTTCTACTTCGGATAGGAGATA 7136696 33 97.0 32 ................................C ATGTACTTGATGAAAACGGCTATCTGATTTCA 7136631 33 97.0 33 ................................C GAATAAACGGAACAGCTGTCGAGTATTCGACTG 7136565 33 100.0 34 ................................. ACGGTTGGAATCGCAAAAAGGGCGCACACAAACC 7136498 33 97.0 33 ................................A TCGATATCATAAAGAAGCTGCCGAAAGACTCCG 7136432 33 100.0 33 ................................. TCCCGGACGATGTGTTTACGCTTATTCCAGATG 7136366 33 97.0 36 ................................A GGAATTAATTAATTTTGCTGACAATGAAGGTGTAAT 7136297 33 100.0 34 ................................. GCCGGCTGGTGGTTAAACATCGGGGCGGCAAGGC 7136230 33 97.0 32 ................................C CATAAGCCTTGATAACCCTGTCTTCCAGATCC 7136165 33 97.0 36 ................................G AACACGACGGATCGCCGTCACTAGGCGATGCCTTGG 7136096 33 97.0 32 ................................A TCGTATTATTTCGCCTCCTTAAAGATTCCCGC 7136031 33 97.0 33 ................................C CCGTCCATCCTTCAAAACATAACGCTTGATGTA 7135965 33 97.0 33 ................................C CCCGCGGAAGCACCCGTAGCCGCTTTAATTTGG 7135899 33 100.0 35 ................................. TCGATTGGGTCAAGGGAGAGTATCTGACCCCGAGC 7135831 33 100.0 32 ................................. AAGCGTCCGATCCAAATTCCCTCTTCCATCAT 7135766 33 97.0 33 ................................A GGGGATCGAAGGACCGAACGCTTTGAGCTCCAG 7135700 33 97.0 34 ................................C ATCCGTCCAACTCCTGTCTAAAAGCGCATAAAAA 7135633 33 97.0 33 ................................A GGAAATTATCCGCTTTACTGGACTGCCGGTCAC 7135567 33 97.0 35 ................................C AAGTTATCTTACAAAAATTTTTAGCAAAATTTATC 7135499 33 97.0 35 ................................A TCGCGAGTTCGTCGGCCACTACTGCCATAGTAACC 7135431 33 97.0 34 ................................C CTGAAACTCTGCATATGCTTTGTCAAAGGCTTCC 7135364 33 97.0 36 ................................G GAAAATGCTGGAGCAATTAAGGGCGAAGCGTGGAGG 7135295 33 100.0 34 ................................. GGATGCATCTGCAAAGCTGGTCAGTATCGTTACT 7135228 33 97.0 34 ................................C GGTATTTGTAGCAACTTCACGGGCAGCTCTAGCA 7135161 33 100.0 32 ................................. GCTGTAACTGCGCCGCCTGTACCTCTAGCGCC 7135096 33 100.0 34 ................................. GAACATCCTTGTCAGCGGTGATCATCTCGACCTT 7135029 33 100.0 32 ................................. CATATTTGACCATAGCCAGCCAACAACGCACC 7134964 33 100.0 32 ................................. AGGCAAACCAAATAGCCAAGATAGCGGAAATG 7134899 33 97.0 32 ................................G ATCTAGACCCACGCACTGCAAAAAAATACATG 7134834 33 100.0 33 ................................. TGGAAAATAAGCGAAGAAAAGCGCCAAGAAAAA 7134768 33 100.0 32 ................................. GGAGACGGCGCCCAGAGAACGGAACAATCACA 7134703 33 97.0 34 ................................C ATACACCAAGACCCAACACTTTAGAGCCGATTGC 7134636 33 97.0 34 ................................A AAAAGCACGTGGCAAAGCGGGCTTTGAAGGGGCA 7134569 33 97.0 33 ................................C GGTCGGAATGATCGGAGAGCAAAAAAAATTGAA 7134503 33 97.0 36 ................................G CTTCGGGAGTTGGGCTACGAAGTGGAATGGAGGGAG 7134434 33 100.0 34 ................................. GTAAGCCCGCCGTGATCCCGTCCAGGTCGCGGAA 7134367 33 100.0 35 ................................. GGACGAATATGCGTCGAAAGAGCCGCCGCACAAAT 7134299 33 97.0 37 ................................G CGAGTACGCGCCGCAATTTAAAGGCTTGGGCTATAGC 7134229 33 97.0 37 ................................C GGGAAGCAAACGGGATTGCAAAGGGAGAATCTATCCG 7134159 33 97.0 35 ................................C AGTAACATCGTTTGCGAGAACAGTTCCTCGAAATT 7134091 33 97.0 35 ................................G TTAATCTCAAAATCTTTGTGGTCCCGAAACTTCTT 7134023 33 97.0 34 ................................G GGACGTTGAAGGCCGAGTAAAGGCTGCTGCCCCG 7133956 33 97.0 32 ................................G CCGCTGGGAATTATCCTGCGGCTTTTTGCTTG 7133891 32 84.8 34 ........-..C.C.......A..........C CTATGTCTTGAAACTATTTTTAAATGAGCTCTAT 7133825 33 75.8 0 ....T....C.C..C..A.........A...AA | ========== ====== ====== ====== ================================= ===================================== ================== 61 33 97.4 34 GTCGCACCCTAGGTGGGTGCGTGGATTGAAAGT # Left flank : CGACGAATACCCTCCATTTCTGTGGAAGTAGGTGATTATGAATGCTGGTATTGATTACTTACGATGTGAGTACGGTGAATGCCGCGGGACAAAGACGGCTTCGCCAGGTTGCCAAGGCCTGTCAGAATTACGGGCAGCGCGTGCAGAACTCCGTATTTGAATGTATCGTAGATGCGGCGGAATGGGCCGCGCTTAAAATTAAGCTGATCGAATTAATCGATCCGGAGCAGGACAGCCTGCGATTTTACCAGTTGGGCAACCAGTATAAAAACAAGGTGGAACATGTAGGTATCAAAGCCTCTCTTGATTTGGAGGGGCCTTTGATTTTGTAGTGCGAATGTGAAGCGAACATGATTTTCCCGGGGGATTCGCACCAAAATGATTGCATTACATTTGAATAATAGTAAAATAAATCCATTCTATTTGTTTAAAACTAGTCGGAAAATTAGATTTTAATACAGAATATGTAATTTATAATCCATATTCTGTTAGAAATCGGA # Right flank : CGTCCAGCAGAATCGGGAAAGGGCGAGACAGTATTCCAGGAGGGCCATCCCCCTCCTCGCACTTAAAGTAAGGGTTGAACAAGCCGCTAGAGCAATTTACTCCGGCGGTTTTGTTAACTTATAAATCACGGAAGTCAATCTCAATTCCCGCTCACTTGAACAACATAGCCGGCCCTCGATTCAGCAAGTCTGTTTTTTAAAACATAATAAGTAGGTTTATCGCATTCCGCAAAAAACAGGTATCCTTTTAAATAGATTCAAAGCAGGTATAATTACGGCAAAGGAGACAGATCGCATGTTGATCAGGAACGTATATCTGCGCCTGTCGGTCAAGTGGAAGGTCATCCTCATTTTTACCTCGCTGTTGGTGTTCATGAGCGGTTTATTTATCATTGGCTTTAATTACATCAACAAGCTCTATGATCGCCAACTGCTGCATAGCTCTTCGGAATTGTTGAACCTATACTCTACAAATATTGAGAATGAACTGCGCAAGATCG # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.40, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTAGGTGGGTGCGTGGATTGAAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 7147011-7146247 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN125580.1 Paenibacillus macerans strain 8244 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 7147010 32 100.0 37 ................................ TTCCTGCATCCGTAATCACCTCGCCTCCAAGGTAACG 7146941 32 100.0 33 ................................ AGAACAACATCAACAACTGGATAGGCCGGCGGA 7146876 32 100.0 33 ................................ CGAAGCGGTTGCGCGGGAAGACCGCCTTATGCG 7146811 32 100.0 34 ................................ AGCGACTTGGTCATGAAATTTCGGAGCTCTGCGC 7146745 32 100.0 37 ................................ ACGCCGTTATTCCCGGGACTTACGAATTTCGGGGCCA 7146676 32 100.0 33 ................................ TTGAGTTGGTCGAATTGGTCGCGCTGTTCCTGC 7146611 32 100.0 34 ................................ GGGTTAGGCAGGGCAAAGGCTGAGGCGGAACGCG 7146545 32 100.0 36 ................................ CCTTGCGCAATATCCCACGCGCCCGAAACCGTCAAC 7146477 32 100.0 34 ................................ AAAGACTTGATCTCTTTTAGTTGGGTTAATTGTA 7146411 32 100.0 34 ................................ TCCGGGCACGCCGGACGTTGAAACGTAGCAAAGT 7146345 32 100.0 35 ................................ ACGGCGCCGTCCAACGGATTATAAGCGAAGGTCTC 7146278 32 81.2 0 ......................AA.AGCG... | ========== ====== ====== ====== ================================ ===================================== ================== 12 32 98.4 35 GTCGCACCCTACGCGGGTGCGTGGATTGAAAG # Left flank : AGCTTAGGCTTGCAGCTAGTCGTTTGGGTTTTTCATGAAATGATTCTCTTTTGCTATCCATTCCTCTAAACCTTATATTGAGATATAAAAGGCACCACGTAGGGTGTCTTTATCGCTTTATTTTGGTGCTTTCTGCTGTCTTTTTAGTCTCATATTGGTAAACGAGCTCCGTACAGGTAATAAAAATGATCTTTTCTGTGTATGGCTAGAAAAATGAGGTTAAGATTTCATATTCAATCAAAAATATTTGCGAAAAAGGTTTACCCTTAGAGTAACTGTGAAGTAACATTTCAATATACATTGTTTGTACTTTAGCTCAACTCCATATTCGGTGCGAATATAAAGTGAACATAAAAATCCCGGGGGATTCGCACCAGATTAATCGTGCTAAATACCCTTTTTTTCAATAAATACCCATATATAACTTTCAAAAATCCTTAAATTTGGGTTTATATAGATAATTAACTCTAAGATTTTACTAATATATGTTAAAAAACGCT # Right flank : GGCGCCTTCCTTACAGAGTTTATAAGTCATATCTCAATGGACAGTCCATACTGGGCTGTCCTTTTTTAGTTGAAGCTGTACTTTGTTGATATGGGGGCATAAGAGCATATGATAATTCTCTAAACTAAGATGAAAGTAATATTACCCAGAAAATTGTAGAATATTGGAAGGAGATTAGAGGGGGGGTGAAGAAATAAAAAAGTTGTAGTTCTTTAGGCGTGTTTCAAGCTTTAAACTAGAGAGTCGTTTGGATTATTTTTCAGCGACAGGAGGCAGGCAATGGAATACATAGCCCATATACGTGAGAGTGACCGGGAAAACCAATTGCTTGAAACGCATTTGCTTGGGGTCAAGAATTTAGCCGAATCTTTTGGTGCTAAGCTTGGAATCGGGCATATTACCGGCCTGGCTGGAATCCTTCATGATATGGGGAAGTTCACGAAGGCATTTCTGGATTATCTCATCGAAGCGGTGAATCATCCGGAGGCTCCGCCAAAGCG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTACGCGGGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 7174708-7172196 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN125580.1 Paenibacillus macerans strain 8244 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 7174707 32 100.0 33 ................................ CAACAACCTGGAAGACCTGCCGAACAGCATTTA 7174642 32 100.0 37 ................................ GGCGCGCGGCTAAGAAGGGCTATATCGCGGTCATCAT 7174573 32 100.0 36 ................................ AGACGAAAAGCTTAAAGATCACGTGGATTTCGGCAC 7174505 32 100.0 35 ................................ TGTACTTGGGGAAATCAACATTATCAAAAGTCAAA 7174438 32 100.0 35 ................................ TTCCCATCCACCATCAATGTTTCCGTTCCAAAGCC 7174371 32 100.0 34 ................................ ATTGTCACTCGTAATTCTTTGAATCATGGCAGGT 7174305 32 100.0 35 ................................ CAATCAAATTCATCTTCTCCACAAACCTCAACATA 7174238 32 100.0 37 ................................ ATAAATACCGATCTAAAAAATCGCGGCGAAGGTGACT 7174169 32 100.0 35 ................................ ACCGTTAATTTCATGGGTCACGGTGATTGTAAAAC 7174102 32 100.0 35 ................................ TGCGTGGGCCAAACATCATTGATCCGGCGGACCGC 7174035 32 100.0 36 ................................ CGGCGTACATTTCCCGACCTCCAGCGGTCGATTATC 7173967 32 100.0 35 ................................ AGCGATTTGACGCCCGATCAAGCGCGGAGAAAAGC 7173900 32 100.0 33 ................................ ATAGTACGTTGCGATATTACGCGCATTGATAAG 7173835 32 100.0 34 ................................ CTTGGGGCGGACTTAGCGACTACGTGAATGAGGC 7173769 32 100.0 36 ................................ CGCGGCGAGCCAAGCATTTAAATGTTGCTGTGCAAC 7173701 32 100.0 35 ................................ AAAAGATAAAGGAGAGACAAGGACAATGAGATTTA 7173634 32 100.0 35 ................................ GGCCAAATGACCGGCTTAGTGAACGATGTTATCGC 7173567 32 100.0 35 ................................ CGCCAACACGTCAATTTCGTCCTGAATGCGCTGCA 7173500 32 100.0 34 ................................ GCCGAGCTCGCGGAGATATTTTCCGAAGTCCGCC 7173434 32 100.0 35 ................................ TCGTAGTCGTAGCGTTATGTAGTCGCCGGGTCCGT 7173367 32 100.0 36 ................................ ACCGCGTATCACCAATATGGTTCTAGCGGAGGAAGC 7173299 32 100.0 37 ................................ TCGGTTGCGATCCCTAACATCGCAGACAAGGAATAAC 7173230 32 100.0 33 ................................ TCGGCCAAGACAGCCGCAGGATTTCGTTTGGCC 7173165 32 100.0 37 ................................ GCCCCTCGCGGACCTACGACACGTAAAACGTGACATC 7173096 32 100.0 34 ................................ CGTAGCTTTTATGGCGTCTTCCACGTCTGGACAA 7173030 32 100.0 33 ................................ CTTTACCTTACATATGGCGCATGGGTTTTCAAA 7172965 32 100.0 34 ................................ AGAAAGATATTGGCGCAACTTTTACGGTGCTCTC 7172899 32 100.0 34 ................................ CAGGCTCGGATATCCTCGTTCCCGTCCTTACCTT 7172833 32 100.0 36 ................................ GTCTCGCCCGTCTCCGGGTCAGCGAAGCCCTTCAAA 7172765 32 100.0 33 ................................ CCAACATGATTCGGCATCCTGTTTAATATATTT 7172700 32 100.0 37 ................................ ACATCAGGACAGCGACCCGGTAGCAGACGGGCGTACG 7172631 32 100.0 34 ................................ ATCCCGGCGCTTATCAAACGCCTTCCCCACGTCC 7172565 32 100.0 36 ................................ TGCGAAGACGGATCGTCGACGATAACGAGGTCTGGC 7172497 32 100.0 39 ................................ AAATCTCGAAAGCTGACGACGAACGCACAATTCCATCAA 7172426 32 100.0 34 ................................ CGCTGGCGGAAGCCGAACACGCAAAACGCATAAA 7172360 32 100.0 35 ................................ TTAAGCAACTTTATCTGGCAGCTGGCCAAGCGGTC 7172293 32 100.0 34 ................................ AACACAAGTCGGCGAACATCATACCCATGCTTAC 7172227 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 38 32 100.0 35 GTCGCACTCCATGTGAGTGCGTGGATTGAAAG # Left flank : ATGAGTACCCGCCATTTTTATGGCAGTAGGTGAGTCGGGATGCTTGTACTCATTACTTATGATGTTCAAACAACAGGCGTGGGAGGGGCCGCGCGGCTCCGGAAAGTGGCTAAGGCATGTCAGAACTACGTGCAGCGGGTGCAGAATTCCGTGTTTGAGTGCATTGTGAATGCAGCCCAGTTCACTGCTCTGAAATTGGAGTTAACCCAGTTAATTGATGAAGAAAAAGATAGCTTGCGATTTTATCGGTTGGGCAATAACTACAAAACCAAAGTAGAGCATATTGGGGCCAAGCCATCGATAGATTTAGAGGAGCCGCTTATCTTCTAGCGGTGCGAACCCCAAGCGCACATAAAATCCCTGGGAGGTTCGCACCCCGCGTCATTAAAGGATTTGTAGAGATTTTGGTTAAAATTAATGGAAAAATTTCGTGCTCGCAAAATGGGTTCGCACTTTTGGGCTTACGAGGCCTTGTGCCACAAGGATTCGCATGGCCCGCT # Right flank : TTATGCGACGCTCACGGCGGAATACCCGGACATAGTCGCACCAGCAAAATGAGCTTTTTCTCGAACAAGCGGTCAAACGATTGAGAAATATTCAGTCCTTAAATAGCCGGGGATAGAGAGGAAAAGTACGGGCGGGGGAATGACGGAGGAAACGGAGGTCCTATACATCGTTATCAGCAAACAAGAGGTGTCCACGCTTAATAAGATTGTCAAATCCATCGACAAATCCGCCTTTATCACCATTCACGACGTGCGGGATGTGTTTGGCGAGGGGTTTTTGGATATTTCGAAGTGAGTGACAAAAAAACGCAACCTTATTTGGTTGTGGTTTTTTGTTTCTCAATAAGTAAGTTGGCAAGACGCTGATAGCACTGTGTGCTCAAGTTCGACCTGGTATAATTTGTTTATGGAGCAACAAGGAGATGGTTACTATTAAGAGTTTTGTGAAAATCAATATAATGAGTTTTGGATACGCGGTAATGTTATCTTTCCCTATACAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //