Array 1 1504790-1503365 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014749.1 Geobacillus sp. JS12 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1504789 30 100.0 37 .............................. ACCTCCTTTTCTGCGGGAGTTCCGATAAGAGCCACCT 1504722 30 100.0 36 .............................. AGAAGCGCCGGAAACGATTGCAGTTGGCCTTTGCAA 1504656 30 100.0 37 .............................. ACGGATATACCCAAGTAAGAAGCTAACTCCTTTTGGG 1504589 30 100.0 36 .............................. ATGAATTGTTCTAATCTCACTACTCATTTCCCCTTT 1504523 30 100.0 38 .............................. GTAGAGAAGCCGTACCGATTATACCTGTTCGCCGATGA 1504455 30 100.0 38 .............................. CTGACTACCAGCGTGGAACATGCAATTCAATCCTTAAA 1504387 30 100.0 36 .............................. ATTGCTGGGACTGGCCGCTACCCCAACGTCCTGCTG 1504321 30 100.0 35 .............................. AAGATCCTCATTGTATCATAGCGAGCGGCAACCCA 1504256 30 100.0 37 .............................. TAATACTCCAGAGTTTCTTCGATTTTTGGGCGGCTAA 1504189 30 100.0 38 .............................. ACCGACGACAGCCCCAATCATAGCCGCGCCGGTTTTGT 1504121 30 100.0 35 .............................. TCGGCTATTCTTGTGTTAATGTAGTGGAATTTGTT 1504056 30 100.0 38 .............................. ACGAAGCGGTCAAAGATCATAACGATCAATTTATTCAA 1503988 30 100.0 35 .............................. TATGAAAAAGACGAAGGGCAGCCCTAGGCCGCCCT 1503923 30 100.0 36 .............................. TCCGCTTTCTAGGCTTCTTCACTTTGAGCTTCGGTT 1503857 30 100.0 35 .............................. GAAATCAATTTGCCGCTTTCCAAAACAATGGAAAA 1503792 30 100.0 35 .............................. CGTCGCGGTGCATTAACCATACGCCGCGGCCACGA 1503727 30 100.0 39 .............................. CTAAGAAAAATTATTATCATGAATATGCAAACGAAGAAG 1503658 30 100.0 36 .............................. AATACGGCAATCCCATCATCTGTATTCTCAACATCC 1503592 30 100.0 36 .............................. GTCACATCATAGTACCAATCAAAAGGATACGTATCG 1503526 30 100.0 35 .............................. CTTCGTTGAAGCGGGAGTCTTCTTGGCTGAGACGA 1503461 30 100.0 37 .............................. TATTTTTTTGATAGTGACATATAAAACCTCTCCTTTT 1503394 30 90.0 0 ..............C......A.C...... | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 99.5 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GGGAGCGCAAATCGCCTACGCCCGTTTTACTGCCTTGCCGCCGCTTGTGTATGTGAGTGTGTTCGGGCGCTTGATTTTGTCGCCGCTGTTGGCTGCGTCTTTGATCTTTCTATTAGGAATGGATGGCGTGACGGCTCAGGCATTGCTCATTGCCAGTTCGTATCCATGTTCACGCAATACGGCGCTGTATGCGCTCGAGTATGACTGCCACCCCGATTACGCCGCCCAGGCAGTGCTGGTGTCGACCTTGTTGAGCGCCATTACCGTGACAGGCACAGTATATGCGGCCCGTCTGCTGTTTCCGATTGGCGGATGAAAACGGAGGTAAGCTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTCTTTTCGCGTCAAAATCCTACAACCAACACGGCTGAACAGTATTGACAGAATTTTTGAAACGTGTTATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTACGCACATGGTTTGGGG # Right flank : TGTCTCCTGCCACAGCTGAACCACCGCTGAGTTCAGCTTGTTTTACCGCTCGACATAGGAAAAGGACAAATGCGAAATAGCACATGCCAAAAAAAACGCGGGGGAAACAAGAAGGAATTCGGCCGCGAAGAGCGAATACAGTATGGTGAATCTGACATTGCAGGGAGGAAAAACGTGGCGAAGAAGCGAATTGACCATGACCGGTTGTTCAAAGAGTTGCTGTCGACGTTTTTTGAAGAGTTTTTGCTTCTTTTCTTTCCCCACGTGTACGAGCACATCGACGTTCACCATCTCTCTTTCCTCTCCGAAGAATTGTTCACCGATGTGACGGCCGGAGAGAAGCACCGCGTCGACTTGTTGGTCGAAACAAAGGTAAAAGGGGAAGACGGACTCGTCATTGTTCATGTCGAGCATCAAAGCTACACCCAGCGGACCTTCCCCGAGCGAATGTTTCTCTACTTCAGCCGCTTGTTTCAAAAATACCGCCGCCGCATTCTCCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1514413-1512911 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014749.1 Geobacillus sp. JS12 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 1514412 30 100.0 36 .............................. TCTGTGGCGATGAAAGGACCTTTCACTTTGTCTTTA 1514346 30 100.0 36 .............................. CTATACCACACTACCTGAGTCAACCTTGTCCGCGTA 1514280 30 100.0 37 .............................. TATGCCTCATCCCATGTTAATCTACGGCGACGTTTGT 1514213 30 100.0 35 .............................. TTCAATATGATTCAAGTAGATGTGCGTATCACCCA 1514148 30 100.0 38 .............................. CTTAGATGGTGTCAGCCATCTATGGTCATTTCTTACAC 1514080 30 100.0 37 .............................. TATGCCTCATCCCATGTTAATCTACGGCGACGTTTGT 1514013 30 100.0 35 .............................. TTCAATATGATTCAAGTAGATGTGCGTATCACCCA 1513948 30 100.0 38 .............................. CTTAGATGGTGTCAGCCATCTATGGTCATTTCTTACAC 1513880 30 100.0 39 .............................. GGCAACAAACGCAGGTAATGCAATTGCAACTTGGGCCAC 1513811 30 100.0 43 .............................. GTGCCAAGGTTTCAACGCCGCGACAGGGAAACGATAGTCACAC 1513738 30 100.0 36 .............................. AACCAACATGGCCAAAGTATTTTTTAACCGCTTCAT 1513672 30 100.0 37 .............................. CGGCGTATTGCTCGGATGTTTAAGCAAGTACGAAACC 1513605 30 100.0 36 .............................. GCAAGCGACGTCGGGACAGCCGGCAGGAAGCCGGCC 1513539 30 100.0 38 .............................. TCAGATGGAAAAAGAAGGTGTATGAATGCGAGGTTTCT 1513471 30 100.0 37 .............................. ATACCAATGAAAATATCGTGCAGTCAAAGTTCACCGA 1513404 30 100.0 37 .............................. TCACCAAAGGCGTTAAGGGTGAATAGCGGCCTAACGC 1513337 30 100.0 40 .............................. CAAGCGTGTTATTGAGTTTTTCGGTTTCTTCTTGTATTGC 1513267 30 100.0 38 .............................. GCATATATAGGCAAATCAATAAGGCTTCAAAGAAGAAT 1513199 30 100.0 38 .............................. GCAGGATTGTCGCCAGCTCCGCACCAAATGTAGTCGGC 1513131 30 100.0 35 .............................. CCAAGAAACCATTTAACGATTCAATCGGCGAGACG 1513066 30 100.0 37 .............................. ATGAGTAAATCTAAATGTTTATTCTCAATATATTTCC 1512999 30 100.0 29 .............................. TACGTACCGTTCCAATCGGACTGTTTCAG Deletion [1512941] 1512940 30 83.3 0 .C.........C..C..C..T......... | ========== ====== ====== ====== ============================== =========================================== ================== 23 30 99.3 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAACCCGGCGCTGTCCGACGACATCATCCGTGTCGCCCGCTCGCCGATCCGCAAACTTGGGCCGAACGACCGCCTCGTCGCTCCGGCAACGCAATACTGTGCGCTATTGGGCAGCGTCCCCGCTGGTCTTGCCAAGGGCATTGCCGCGCTGCTCTTGTTTGATCATCCGGAAGACAGCGAGGCGGCCGAGCTCCAACAAACGATCCGACAACGCGGGGTCGAAGAGGCGCTTCGGCAATACGCCGGGCTCGAAAGTGCGCACCCGCTTGCGGCCGCGGTGAGGGAAGAGTACGGGAGAATGGAGAAAAACAAAAGCTGACCGCCTTTCAAATGTCGTCGACCTCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAGCAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACAGCCAAAAGGGGAAAAGCTTGATTTTATGCGCATTCTTTGGG # Right flank : ACTGTGTAGTACGGCACAACTTTTTCTGTCTCCCATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATCGAACACGTTCAAAGAGGGGTGATCGAATGGCCATTGACCATGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTCCCCGACATGCACGAACACATTGATTTCCGCCATTTGTCCTTCCTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGTGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAGACGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTGTCTATTTCAGCCGTCTGTTTGAAAAATACCGCACCCGCATCGTTCCGATTGCTGTCTTCAGCTATGAGGCCCTTCGCGAGGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAGT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 3520427-3521119 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014749.1 Geobacillus sp. JS12 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3520427 30 100.0 35 .............................. AATGGAGTACTCCAAAAAAACGAACGGAGTACTCC 3520492 30 100.0 37 .............................. TTTCGATGAGGAAATCGAAACTCATATTGCGTGGAAT 3520559 30 100.0 36 .............................. AACCGCGCCCTTGCTTCGCGTTCGTATCGACAGCAA 3520625 30 100.0 37 .............................. TATCCACGGACAACGACAAGACCGGAGAAAAATTAAC 3520692 30 100.0 36 .............................. TCATGCTTCTTATGGATGGTTGCGTAAGATCGAAGG 3520758 30 100.0 38 .............................. AGCGCAGGTACATACACTTTGAATTCGCGTTTTCTTAC 3520826 30 100.0 37 .............................. AAATTCCCACACCGACGAATGTACGGAACGCGGACTC 3520893 30 100.0 35 .............................. TTTGTTATGAGTATCAAAGGAATGAAACGAGTACA 3520958 30 100.0 36 .............................. GCACCCTCGGATACACGCGCTGGAGAGCGGGAACGA 3521024 30 100.0 36 .............................. ATTCCGTTCCAAGCCGTGGAGAATATGGTTTTGTAG 3521090 29 93.3 0 ....................T..-...... | T [3521106] ========== ====== ====== ====== ============================== ====================================== ================== 11 30 99.4 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : ATCTGAAGAGGAGGAAGCAAAACCGCGACACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATCCAACAAGGAATCGAACAGGGGATAAAGCAAGGGATGAAGCAAGGGTTGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGGTACGATGTCGACACGATCCACGAACTGACCGGACTGCCGATGGAGAAGATTGAAAGGATGAAGGGGTGAGACGGTTCTTTGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCCAAAACCCCGGGGGATCGACGACAATGTTTTTTGCGCCAAAAATCCTACAGCTATTACGGCCGAACCATATTGACAGAATTTTTGCAACGTGATATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : CCTGCCCCAGCATCATAAAACGTTCGGCGCTTTTTTGTTTTCATCAAATTTATAGGGAGTTACATGTCTTGTGGTAGTATAGTAATTCTGAATTTTATAAAAAACTATCTCGTTTTTTATCCCAATTTTTTGTCTATATGGTATAATTAGATTAGTCCAAACGATACAGAGGGGTGATAGATTGATCGAAGCAATCGCCCAAATTGGAAAGATGGTGCTCGAGAAGCAGGGAGAAGCGTCGGTTATTGATCAGTTGGTTGAGGATCCAGGTTATCCTTCTTGTGTGCTCATCTCATTGCGTGTGGATGGTGAGGGAAGCGCCGTTTGGGAAGGATGCGAGGTTGAAGAATGCGGAAGCGATTATAAGAAATATTTGTTTCGTTCTGGATCAACGCGTGGAACCAATTATTCTCCCACAGCGAGAATTACGACGATCGAAAATACATATGATCAAAAAGTTCTCGGATGGTTTCGCAAAGTGAATCGGGTGATGGATGATC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 3529826-3531794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014749.1 Geobacillus sp. JS12 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3529826 30 100.0 38 .............................. AATCTATGTTCTTCTAATTTTTTCATCCCGATGATAAT 3529894 30 100.0 39 .............................. TGTTGATAATTCTACTATTCATGGATCTTCATTGGCAAG 3529963 30 100.0 38 .............................. CGAAATCCGGCGGTCTGATTCTACACATGGCAGATCAG 3530031 30 100.0 35 .............................. TCAATGTCGTCAACTTGAAAATTGAAAAACTTCGC 3530096 30 100.0 36 .............................. GACAACGAACCGTTTTTGACCGACGGGAACATCGCC 3530162 30 100.0 37 .............................. CAACGATCGCAAATTTCGCCTTTTCCACCTTTTCGCC 3530229 30 100.0 35 .............................. CTGTTTTCTGATTTTATTGTAACGTATCGTTATTC 3530294 30 100.0 37 .............................. GGAAAGAAAAGAAAAGAACGGATTTCTGTCAGGTTGA 3530361 30 100.0 35 .............................. TTCCTGTGGATCACCTTCTTCCAAGTAATTAACCG 3530426 30 100.0 36 .............................. ACCGTTTGAAAAACACCGTTCTTTTGCTCATTAAAA 3530492 30 100.0 37 .............................. ATTCAAGAATAAAATCATCCACTCCCGAAATTTCAAC 3530559 30 100.0 40 .............................. TATAGCCTTGTTCTTCAATCGTTTTGTATAAATCTTCCAC 3530629 30 100.0 36 .............................. AGGTGACGATGTTTATCTACGCGTATAAGTGGTATC 3530695 30 100.0 37 .............................. ATCCATGATCCGACGGCATCGTGAGCAGTTGCTCCAC 3530762 30 100.0 39 .............................. CTTCGTCGCGAAGCACGACGCTGACGACAAATTCACGCA 3530831 30 100.0 38 .............................. TTTGATTTTCAGATTGAATTTGCGCAACTCCCTTGCGC 3530899 30 100.0 36 .............................. AACCTTCCTTTTGAACGCCCTGCTGTCGCTGTGTAG 3530965 30 96.7 38 ..........................G... CACGCCTGATTAATTTGTCTGTGTCCACAATTTTGTCT 3531033 30 100.0 39 .............................. ACGATTACGTTTAAAGGGAAAACAAACTACTTTTACCTA 3531102 30 100.0 38 .............................. ACCGCATCGCTCACGATCTTGTCATAGGCATCAATCAA 3531170 30 100.0 36 .............................. GCCCGATTTCTTTAGCCAATGACGGCAATATCACGA 3531236 30 100.0 36 .............................. CCCGGTGCCGGGGCTGCAAGTCATCGAACCGTCAAA 3531302 30 100.0 38 .............................. TTGGTTGCGGTCAAGCAACACTATGATTTCTTCATTAG 3531370 30 100.0 37 .............................. ATCGCTGGCGGTGCAGATATGATTGGTCGTGTGGCTC 3531437 30 100.0 35 .............................. CATAGCATTCTCAACGCTTCAAAGCAGAAAAAAGC 3531502 30 100.0 37 .............................. CGAATTTCCTTTAATCCCTCTTTCACGTTCCGTCTTA 3531569 30 100.0 35 .............................. TTGAAACGAAGCAAGCGCAACTACATCCTATTTGT 3531634 30 100.0 38 .............................. CCCGTCAAGCAGGTTGTCGATGTTCCATGTCCCTGTAT 3531702 30 100.0 33 .............................. TTTTTGCTTGCGGCGGTCAAGCCAATCTATGAT 3531765 30 76.7 0 ............T.C.CA...A.C....C. | ========== ====== ====== ====== ============================== ======================================== ================== 30 30 99.1 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGAAACGTTCGATGGAAGAAAGAAAACGCAATTTTTTAATCCCGATGATGAGGTGTTCCCCCACCTGATTGAATTGAATTTCCGTCATAAATATGAAGCATACTACGGTGTTCCGCCGACGGAAAGACTGTTGATCGAGCCGATTCACGTTCATCATCGTCATCGTGTGGTGACGATGTTCAAGAATATATATATTACAGGATGGCTTGGCTATTACCGCCTCTGTTCTTCGCCAGAACAGTTGACATTTTTATATCATGTCGGTCTAGGCGGCCGAAATTCACAAGGATTTGGCATGTTTCGCCTCAAAAGTGGATAAACGAGTCACGGATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGTTTTTTGCGCCAAAAATCCTACAGCCATCACGGTCGAACTGTATTGACAGAATTTTTGAAACGTGATATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : CCTCTCCATCTTCGCGCGCAGGTGTGATGGGGGGCTCGTTGTTGTCGCAGAGTTAGTTCAGACCACATCTCTCATTTGCTTCGTTTGCGGTGATGAAGCATTGTGCGTAACGGATGGGCGCCTGCGGAACAGGCAGTACAGCATTCTAAGTTGGGCAAAGGCATTTCTAGTCTCACGGGTTGCCTTTCTAAGTGACGGGAGAAAAAAATAAGATGGCAACGATCTATGTTGGCGGCATCTTTCGATCGAGGGAATCCCTTCTGAGCAGGGGATTCTTTTTTGGTTCATCACCAAAAGTTGTACTTGCACCTGTCATGAAAGTATGTTAGCTGTTTCTAGCCGAACCCGCAATGCAAAACGCTGGATATTTCTGTATCCGTATCCCCGACGTTTCATCAGCTTGATCTTGTTATTTGTTCCCTCCATTTTCCCATTTGAATAAGGGGATAAAATGCACGATATGATTTCGTCTGTTCGTTTGACGAGTGATTTTGCGATGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 3542564-3544726 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014749.1 Geobacillus sp. JS12 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3542564 30 100.0 35 .............................. AAAGGAGGTGAAAGAATATGATCTTGGGTACTGCA 3542629 30 100.0 36 .............................. ATTTCTATCCAGCGGTCATTCGCCTGCTGGAAAACG 3542695 30 100.0 39 .............................. CTCAGGACAAGAACGCAACAAAAAAGAGCGCCCTCATGC 3542764 30 100.0 35 .............................. TCAACAAAATTTTAAAAAAAAATGTTGTATTTTTT 3542829 30 100.0 37 .............................. GAATCAGAAGCGGCAAGGAAGTAGTTGATAAATGGAG 3542896 30 100.0 36 .............................. TCAAAGATTGCGCAACGCTTCTTTGATCATCTCGTC 3542962 30 100.0 37 .............................. TTAATACGGTTAGCTATTGCTTTTTGTGTAGGATAAC 3543029 30 100.0 37 .............................. AATGAAACACTATCGCATTGAAACGATTTATACGCTG 3543096 30 100.0 38 .............................. CGGACGGTCGGGTCGCGGTAAGTCGGCGATCACACTCG 3543164 30 100.0 38 .............................. CCGATACTTTAGCGTCGGTCAATCGGTCAATTTGCTTC 3543232 30 100.0 39 .............................. CCGAACGCCGCCACGACAAACTTGGTCATGACTGCAAAC 3543301 30 100.0 35 .............................. CTTGTCCATTTTCATCGTAAAAGGAACGCCTCACT 3543366 30 100.0 36 .............................. ACGATTCGGTGGCACAAGACAAAAACGCGGATGCGC 3543432 30 100.0 38 .............................. GTTTTGTGCTGTATCCTTTTTCGATTTTAAGTATTCAA 3543500 30 100.0 36 .............................. TCACTCCATCTCCGGCTCTGCAAGTTGCCGAATATT 3543566 30 100.0 36 .............................. GAGACAAAGACCTCGCGTTTGCCTTCCGCCTCCCGC 3543632 30 100.0 38 .............................. ACATGCTTATTCCTCCTTATCCTTTTTCAGTCACCAGT 3543700 30 100.0 36 .............................. ACTTTTCTTCTTCCCAATGTGACAATACTCCTTTTT 3543766 30 100.0 36 .............................. GGTGAACCAGTGAAAGGAGGAGACGCAAAAAAGGCA 3543832 30 100.0 36 .............................. TCACTCCATCTCCGGCTCTGCAAGTTGCCGAATATT 3543898 30 100.0 35 .............................. GTAATGAGAATGTTTTGGCTGTTCCGGTTGGTGAT 3543963 30 100.0 39 .............................. CAACTTCACCCAATCTTGCACTGCCGATAATTCTTGTTT 3544032 30 100.0 38 .............................. CGTTGTACTTGACGTTGACGTCGCCGGTGTCGAAACCA 3544100 30 100.0 38 .............................. AATACGACGTACACGTGACCGTTGCCGCAAGAGTATAG 3544168 30 100.0 35 .............................. AAACCTCATAAGACTCACCAGTGAGAGTACAAATA 3544233 30 100.0 35 .............................. CTCCGCTTTCTCTTTGCGCTTCGCATTCATTATTC 3544298 30 100.0 35 .............................. TTTTGCTACTTTGAGTTTTACTTTCCCCATTTCCC 3544363 30 100.0 37 .............................. TCCAAAAAGTGCGGAGCGTGTTGTGCTAGAACGTCAA 3544430 30 100.0 36 .............................. TGCCGGCTGTAAAAAGAGCAATCACAGCGCGCTAGC 3544496 30 100.0 37 .............................. TTAACACGCTCATTTCATGTTCAGCTTTTCTAACTTG 3544563 30 100.0 37 .............................. AAAAAGGACTATATCGTATTTGAGAAAGAGGGAAAGT 3544630 30 100.0 37 .............................. CGTTTTTCGTAAGTATAAACTCCAATCCGTCTGCGTA 3544697 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 33 30 100.0 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GAACGCGCTCGTCTTGAGCGTCGAAAAATCGAGCAGGAAATGGTGGAGCGAAAGAGACGCGAGGAAGAAGAACGAGCAAGGCTGGCCCTCCTCTCCCCCGAAGAACGGTTGGTGGCCGAAATTGAACGGTTGACTGACAGCGAAACGGATAGGCAGCGAAGCAAGGATAGCCTTTACCAACAGGTGATCGAGCAGCAAAACAAACAAGCCGCCGTTGCGTTGCAGGCTTATTGGAAACGCATCGGAGAATGGGGAAAAGCCGTCAGCAAAAAGCAAAAGCAAAAAATGGACAAACTTCAACAACTGTTGGAGGAAAAGTGAGGGTCTTGTGATTGTCGTCGACCCCCAATCGTGCAAAAATCCCGGGGGATCGACGACAATGGTTTTTGGTGGTTCAGACTTACAGCCATCAAGGTTGAAGGTTATTGACAGAATTTTTGAAATGTGGTATTCTGAAAACAGCGCTAGATCGAAATGCTTGATGCAACAAGCATTTTTGG # Right flank : CATCTGTTCAACAGTCAAATCACGTGGTACAGGAAGTTTTTATCGCACCTTATATTTCCTCTATCGCCCCGCTTTGTTTTGCTTCCACTGCTCATTGTCGTGTTGCTTGCTTTGCAAGAAGTCGCTTTTTTCCTGTTTCGCTTGGCATCTGCTTTTTCTGTGATGCCCCCTTGATCCACAAACATGGTTGTTGTTCATCGTCTTTCTTTGCGGTTGCTGCATTTCTTGAGTCCGATGAGATATACTTGATATGGGGACAATCGCTCTTCTTTCCTGTTCACCGTAGTGTCGGGGAACATGCTATGTTTTGCGTTTAGGCAGCCTGAAAAGCGACGGGGGTGGGATGGATGCGCCGCAAGCTTCGTGATCTCGGTTTTTCCATCGGCACGCTTCCGACAGGGGAGCGCAATCAAATCACCGATGTGCCTGGGGTGAAGGTTGGGCACGTGACGATTCGGGAAGAGGTGGATGAGCGGACGGTGATCCGCACAGGGGTGACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //