Array 1 475609-476858 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGNH010000002.1 Klebsiella grimontii strain 4928STDY7071408, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 475609 29 100.0 32 ............................. GGCCTTTTATATAATTGCGTTTTCTGTTGCAT 475670 29 100.0 32 ............................. ATGTATGACCGGCTCCCTATCGCCACTAAACC 475731 29 100.0 32 ............................. ATTCATTTCCAGCAAGTCTTCTATAGGCAAAT 475792 29 100.0 32 ............................. CCCATTACATGACCCTCCCCATGTTTCGTAGT 475853 29 100.0 32 ............................. GCTCAGCCCACTTTCAACGCTGATCAAGCCGC 475914 29 100.0 32 ............................. CCTTTAACTAAAAGCGGCCACCTTTCTAAGAA 475975 29 100.0 32 ............................. ATTAAATCATCGGGAGGCAACCCGCAGCCCGA 476036 29 100.0 32 ............................. GGGACCGGATAAATTCGAACATCACTTTCAGG 476097 29 100.0 32 ............................. CGTTTTGCCGTGACACCCTCATCCCAGTAATC 476158 29 100.0 32 ............................. AACCTTAGCCATGATATAAAATTGGTCTTCAT 476219 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 476280 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 476341 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 476402 29 100.0 32 ............................. GGAGCATTTAAAAATCTGCTGCTGCACGCGCC 476463 29 100.0 33 ............................. AAATCCGCAGCCGCCGCGAAGTCGTTCGCGTGT 476525 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 476586 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 476647 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 476708 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 476769 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 476830 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 180695-178652 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGNH010000010.1 Klebsiella grimontii strain 4928STDY7071408, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 180694 29 100.0 32 ............................. ATCGTCTTGCCAGTGTGTATGGCATTGAAGCA 180633 29 100.0 32 ............................. TGCTTCAGCAATTTGTTCATAGAGTGACTGGA 180572 29 100.0 32 ............................. AGTACGGCATGGTTGCCATGATCGACGGCGTG 180511 29 100.0 32 ............................. CTTGCCATCGCTGCACCATCCCGATTGTTTAT 180450 29 100.0 32 ............................. GGATTACGACGTCCCGACAGTTGAGCAGTGGC 180389 29 100.0 32 ............................. GCTACGGAAACGCCATAAACGCCCAGGCTGCG 180328 29 100.0 32 ............................. ATGCTTATCGGTACCCGGGCGGCCTATTACAC 180267 29 100.0 32 ............................. GTAACGAAATGAAATTGCATTATTCGTACAAA 180206 29 100.0 32 ............................. GTAACGAAATGAAATTGCATTATTCGTACAAA 180145 29 100.0 32 ............................. CGTCGTACGGAAATATCTGGTCGTTACCTGGA 180084 29 100.0 32 ............................. GTTTTTGTGACAACCATCAAAAGCGCGGATAA 180023 29 100.0 32 ............................. ACCGATTCCCGGAAAACATCGATGGGGAGGGC 179962 29 100.0 32 ............................. CGGTAAACCGAGGCGATCACGCATTGCCTCTT 179901 29 100.0 32 ............................. GGATTAAGCTGATTCTGGCTGACAGAACAACG 179840 29 100.0 32 ............................. GCTTAATACCAGAGTATGGTAATAAATCCGAT 179779 29 100.0 32 ............................. CCGCCTACCACATCTTTCACGTTGGCCGGAGT 179718 29 100.0 32 ............................. CCGTCAGGCTGCATTTGAAAAGTTGGAGCGCG 179657 29 100.0 32 ............................. ACCAGGTGACTGCGGATAGCCAGTCAGGCAGT 179596 29 100.0 32 ............................. CTCAAAACCGTGTCAACAAAAAAAGTGGAAAT 179535 29 100.0 32 ............................. AATGCGGGCCCGTGGGTTCTGGCTCAGGATGT 179474 29 100.0 32 ............................. CCGACACCTACAGTGAGGTGCGTCCTGCGCAG 179413 29 100.0 32 ............................. TCGGTTGCCGTCTGAATATCAGTAGCAGAACG 179352 29 100.0 32 ............................. ACACGATACGACTCACCAGGTGAAACGGGTAT 179291 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 179230 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 179169 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 179108 29 100.0 32 ............................. TAGTTTACGTTCGAATCCACGCGGCCTGAATT 179047 29 100.0 32 ............................. CTTTGCAGCGCAGTTCCACTACTTGCAGCTCC 178986 29 100.0 32 ............................. CTTTGCAGCGCAGTTCCACTACTTGCAGCTCC 178925 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 178864 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 178803 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 178742 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTTTGCGAAT 178680 29 86.2 0 ............TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.5 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTTATTATTTAGTGTGGCAAAGTCCAGTTCGAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //