Array 1 1873264-1876946 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017688.1 Flavobacterium crassostreae strain LPB0076 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1873264 46 97.8 30 A............................................. TGAGAAGTAAATGGGAAGCGCACAACTCGG 1873340 46 100.0 30 .............................................. TTGCAGCAAGTACTTTTTTAAAGCTGGTAA 1873416 46 100.0 30 .............................................. TTATCTTCGATTAATTCATCGTTTCCGCTA 1873492 46 100.0 30 .............................................. GGAGCAGATAAACAAAGAGCTGGAACAGCA 1873568 46 100.0 30 .............................................. TTTCCATTTTGTTTTGTTTTTTAGTTCAAT 1873644 46 100.0 30 .............................................. AGCAGCTTCCAAAGCTTATTGAGCGGATCA 1873720 46 100.0 30 .............................................. CTTGCTGATAATAACGACATTAGAAGCATC 1873796 46 100.0 29 .............................................. GGTAGTTGAAGCAAGCATCCCGTTGGCTA 1873871 46 100.0 30 .............................................. AAACAATTATGGAAAAATACGTAATGTTTG 1873947 46 100.0 30 .............................................. ACGCTTGTTTGCTGCTGAAGTATTAATGAA 1874023 46 100.0 30 .............................................. ACGACGAGAAAAACGTTTGTACTGTTACTT 1874099 46 100.0 29 .............................................. GCGGAAATAGAGAATTAATGAAGTTTATT 1874174 46 100.0 30 .............................................. TGACACCTCGGTTAATGCTTTAATCTTGTT 1874250 46 100.0 30 .............................................. CGGCTGGTTATTTCGCTACCAACGGAAACG 1874326 46 100.0 30 .............................................. ACGTTAAGAAAACCAAAGGAGATTTTGACA 1874402 46 100.0 30 .............................................. AAAAGTATGATTATAAACGTGAAATATGAT 1874478 46 100.0 30 .............................................. AAAAACGGCAAAGCTTAGTTCCGAAGATTT 1874554 46 100.0 30 .............................................. ATTCATGGGGCAATTTTGTTGCTAGCTTAG 1874630 46 100.0 29 .............................................. CACCTCAGGGATTATTCCGAAAGGATTAA 1874705 46 100.0 30 .............................................. TTTTAACAACTTAAGTATTTCATCAAGAAT 1874781 46 100.0 30 .............................................. TAGCACTTGTGGCTTCATCGGTCACTTTTT 1874857 46 100.0 29 .............................................. AGTTTCTGTTTTGGGGCGAGTACTTACTA 1874932 46 100.0 29 .............................................. TACCAAATAATCGGTATTGCGATTAATAA 1875007 46 100.0 30 .............................................. ATTTGAAACTAAAGAAAAAAGAGCATACCT 1875083 46 100.0 30 .............................................. CCCAATTATCGGCTAAACCTACGGCAGATA 1875159 46 100.0 29 .............................................. GGCTAACTATTCCGAAATGCTTGCGTACT 1875234 46 100.0 29 .............................................. TCAATGGGCTAAGACAGACTCAGTTTTCA 1875309 46 100.0 29 .............................................. AGAAGCGAAAAAAGAAAAGTTAAAAGCAA 1875384 46 100.0 29 .............................................. TAAGGGGCTGGCTAATCGTACTAAGTGGC 1875459 46 100.0 30 .............................................. TACAATTAAAAGCGATGCTACTTAAAAAGA 1875535 46 100.0 30 .............................................. TTTTTTCAATTTCCAACTCCATAAATTCGG 1875611 46 100.0 29 .............................................. GATATGACGGCAGGCAGTATCAAGAGCCG 1875686 46 100.0 30 .............................................. ACACCTCAGGCATAATACCGAGAGGTTTAA 1875762 46 100.0 30 .............................................. TGTACGCTTCGGTTGCACCCTCTTTTCCTA 1875838 46 100.0 30 .............................................. TTAGAAACTTGGCTGAGTTTCCTGAGATGT 1875914 46 100.0 30 .............................................. ACACTATTCCACGTGCTACGGAGCTTATAT 1875990 46 100.0 29 .............................................. AATATTTATTTCGATGTTAGCGGATTAAT 1876065 46 100.0 30 .............................................. GAGGCTAAATATTCCGAAATGCTGGCATAC 1876141 46 100.0 30 .............................................. CTACATTCTTTTAATATTCGGACGTATTCA 1876217 46 100.0 30 .............................................. ACAAATCAATTCTCAATTTCTCAGGTAAGC 1876293 46 100.0 30 .............................................. AACTTGCGAAAAAAGGCTCTGCTGATGAAG 1876369 46 100.0 30 .............................................. TTAATTTCCACAGCCAATCATACCACCCCG 1876445 46 100.0 30 .............................................. TAAATGGATGGATGGAAAAACAGATTCTTT 1876521 46 100.0 30 .............................................. TCAGTTCAAATTCTCGTTATCGGCTACCAC 1876597 46 100.0 30 .............................................. CAGACAACCAAAAGAGCGTTCTGGCACTGA 1876673 46 100.0 30 .............................................. TGAATCAAGTTTTCACATTACCCACAGGCT 1876749 46 100.0 30 .............................................. CGGAGCAGTTGGTAAACAAGGTATCACTTC 1876825 46 100.0 30 .............................................. CTAAGCCTTTCACAAATAATGCCGCCCCCT 1876901 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 49 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Left flank : GTTCTTTAACAGACATTATTTTATCAGAGCCAGCAATGATATTTAATGCCTCAACGAGATCTACCATAGATAAAGAGTCATAATCCTGCATGGGTATTTCATGGCGCTCTTTCAGGGTTTGGTCTTCGCTTTCTTCGGCGTTAGAAGCATCAATAGAACGCAGTGCCCTTTGTGAATCCTGCTCTAAGGATTGCTCACTTATTCCAGCAATTGTATTTTCCGTTGCGTCTTTTTCAGGAGCTGTGGTTTGTTTTTTTTCGAGAGACTCTAGTGCTGATTTTCCATCTGCATTTTGCAGGTTATCATTCTTTTCTTCTAACATTGGTTCAATGTTTAAGGTTGCTAATAAATTGAACTCGAAAGATAGTAAAGCAGTATTAAATAAAAAAATAATTATCTAATTAAGAGTGGTTTTAGGGTACAAAAAGGTTTTTTTATTTCTCAGAATATAACATCCCAAAATTACATTTAAATTTCAGAGGTATAAATTAGTAGCTCCA # Right flank : CATACCGCGATTTAATCGTTTGATATGTTGGTAGTTATGGGTTTGTTTAGAAAATAAAAATGGATTCTTAAATAGTGCTAATCTTCAGCTTGTTGTAGGTTTTTGGAATTCTAATTTTTAAAAAAGTTCCAATTGTTGCGAAGGTTTATCTGTTTCTACCGGCTTTTTGCCATAAAAAAGTTCCATCATTCCAAATTGCTTGTCCGTTATTTGCATCACACCAATTTTGCCGTGCTCGGGTAAACTATTCCTAATTCGTTTGGTGTGTACTTCGGCATTTTCTTTACTGGCACAAAAACGCATATAGATAGAAAATTGAAACATAGAAAATCCATCGTCCAATAATTTCTTTCGAAATCCACTGGCAATTTTGCGCTCTTTGCGTGTTTCTGTAGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATATTGATTTAATCGGGTGTACTGTTTGTCAAACATATTTATTTCAAAGCTGTTTAACCGTAGACAGGATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //