Array 1 460543-454357 **** Predicted by CRISPRDetect 2.4 *** >NZ_SESI01000001.1 Halonotius roseus strain F9-27 F9-27-c1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 460542 30 100.0 35 .............................. GAACAAATCGACTGGATGGGCGACGAGGTCGCGGC 460477 30 100.0 35 .............................. ACCACAGCGATGGGTGGACGGCGGTCTTCATCGTC 460412 30 100.0 36 .............................. GAACCACTGATCGGCCCGGTCGGCGACGTTGAACTG 460346 30 100.0 36 .............................. TTATTGAGATAGCCCTCATCGGCAAGCGTGTGCAGG 460280 30 100.0 37 .............................. GGCTGCGCTGGGATGGAGTGCCAGTCGCCGCGAAAAC 460213 30 100.0 36 .............................. GCGGAGCCACTCGGTAAACTTCCGCGCCTTGCCCGA 460147 30 100.0 35 .............................. CACCTGACACTGTGGTACACGCCGATCGGCCGGCT 460082 30 100.0 35 .............................. ACCTATGCAACTCACAGCCGATATCGACGACATCA 460017 30 100.0 37 .............................. CAAATCCTGACGAAACGGCCCGGCCGCGCCGCTCACA 459950 30 100.0 35 .............................. ATCCCGAACACGGGTATCGGATCTGCGGCTGCAAG 459885 30 100.0 35 .............................. CGACGGCCGGCTGCCGAACGGCGACGAGGTCGTGA 459820 30 100.0 36 .............................. TGATCCAACAACTCGGAGAACGCCGACTGCAGGCGA 459754 30 100.0 35 .............................. TCGCGGAGTCGGATGCCCCCGAGCACGTTGCCGTT 459689 30 100.0 34 .............................. CGATGACCCACTCCCCCCCAGTCTCGGCGATCGC 459625 30 100.0 36 .............................. ACACGCTCGGGTTGGACAAGCACGGCCGCCGGCGCG 459559 30 100.0 35 .............................. GGTCGGGTCGTCGTAGGCGTGCTCAACGAGCGACG 459494 30 100.0 35 .............................. ATCTGGACACGAAACCGACCAACAGGTCTGGGTCT 459429 30 100.0 36 .............................. TCGCAGATGTGATGCAGGCAAAGATCCGGTCAGTGG 459363 30 100.0 37 .............................. AAACAGAGCAGTGCGCGTCAACCCGAGACTGGCACGC 459296 30 100.0 32 .............................. GTCGTCGATCACCCAGTCGGCCTCAGGCACGC 459234 30 100.0 35 .............................. AGGCTGTCGTCGCTGCCCTGTGGGCCAACGTGAGC 459169 30 100.0 36 .............................. GACTTGTAGGGGTCGATGCGCCGCACGCGGATCTGT 459103 30 100.0 33 .............................. TCCGATCTCGCTCACTTGGTAGAAACATCGCCC 459040 30 100.0 37 .............................. TACGAGTGCCAGCAGTGCGGCAACGAGTTCCGAAAGG 458973 30 100.0 35 .............................. GCCGTTGACATCCTCGGGGCAGTTGGTATCGCGTA 458908 30 100.0 36 .............................. GTGTGACCACTTGAAGCGAGCATCACACTCACACTC 458842 30 100.0 34 .............................. TCGCGGAGTCGGATGCCCCCGAGCACGTTGCCGT 458778 30 100.0 36 .............................. GTTGATCCACCGCTCGATATCCTCGCGGTCGGGTTC 458712 30 100.0 37 .............................. GACAAGCCGAACGACGTGCTCGAAGTCGTCAACAACA 458645 30 100.0 36 .............................. CCGTTCCAAGAGGTCGAGCAGGCACAGGGTGGGATG 458579 30 100.0 37 .............................. GAAGAAATCGGCAAGAAGGTCGGCCTCGGTTATCACG 458512 30 100.0 35 .............................. TCGACAGCGTCGCCGTGGCTGTCTCGGGAGTCGTT 458447 30 100.0 36 .............................. CCACTTGACAGCAGCGGGAACATCGTCGACCCGATC 458381 30 100.0 38 .............................. TCCGAGACTGTCACTTGTCGCCGTGATCTTGTTGGCCC 458313 30 100.0 36 .............................. CAGATCAAAGCCAAAACCATCGACAACCTGGTCTTC 458247 30 100.0 34 .............................. CGTTCGTCTCGGCGGGGAGATCAGAGTCGATCTC 458183 30 100.0 33 .............................. GATGCGGAGTTTTGCCTCGAACTCGTCGATCAC 458120 30 100.0 36 .............................. AGCTGGGCCCTGGAGGGGCTGCTCGCCCGAGAGACA 458054 30 100.0 37 .............................. CTCGGCGACGACCGACCGATGGTCGAGATGTACTCAA 457987 30 100.0 37 .............................. ACTACCGGCCTCGTTATCGCGTTTTGAGGCAAAGGGA 457920 30 100.0 35 .............................. TCGCGCTGCCTGCTCGGCGTTGGCGGCGATGTACG 457855 30 100.0 32 .............................. TTGACTGGGTCGAGAAGCTACGGCCTGAGAAC 457793 30 100.0 36 .............................. GAGCTGTCGCGCAACGAGAACGCCTACATCCCCGAA 457727 30 100.0 36 .............................. CTATAATGTCACAGAACGAAGATGCGCGAGAGAATC 457661 30 100.0 33 .............................. GTCGGGGTTGACCTCTGCTGCCGGGACGAACGG 457598 30 100.0 35 .............................. CCCACAGCAGCGGGAGGATGTCCTCGACCCAGACT 457533 30 100.0 34 .............................. TGTCGTCTCAGATGTCGCGCTGAACGTCTCGCTG 457469 30 100.0 34 .............................. GACGCCCGTCTTTGTGTTGTAGTATTCGATCTCG 457405 30 100.0 36 .............................. CATTTCAGCCAGTCACAGAACCCGTACCCGACGCCG 457339 30 100.0 34 .............................. ATCGTCGGGGTTGGGATTGTCCTCGGTGGCTATC 457275 30 100.0 37 .............................. AAACTTCGATACGGAGTCGAAGGGAGATATGGAATCG 457208 30 100.0 37 .............................. AAGGATCGGCAGGGCCTCGCGGCCGAGGTCGACCATC 457141 30 100.0 36 .............................. TTATGGGGATATCCTCAGCCCAGGCACGACGACAAG 457075 30 100.0 36 .............................. GAGGAATCGGTCGGATGCGAGATCGGCGTATGAGTC 457009 30 100.0 36 .............................. TGACAAGCCGAAAATCGTCCTTGACGAGCAGACAAA 456943 30 100.0 33 .............................. ATCTGGGCCGTGGCGGCCGCGGAGCTTCATCGC 456880 30 100.0 36 .............................. CTCGGCCTTGGCTCATGCGTCGACCACCTCAATGCT 456814 30 100.0 36 .............................. GTATCCCAGCTCCTCCTCAAGTGCATTTTTGATTTC 456748 30 100.0 35 .............................. ATTACAAGAATAACTCAATAAGTGAATCAACAATG 456683 30 100.0 35 .............................. ATCCTCTTCGATGCTGCCGTCGTTGTCGAGATCGA 456618 30 100.0 35 .............................. GGAGAGCGACGACGACCGACAGTGTCGGCACTGTG 456553 30 100.0 36 .............................. CCCTGCTTGTAGGCCGCACCGAGGCTGAGAAGCCAG 456487 30 100.0 37 .............................. CGTCATACGTCAGGGTGGGCGGTTGGATGTTACCGTC 456420 30 100.0 36 .............................. ATGTCGGGCGCAACCGCCCACAGTCGCATCGGCTTG 456354 30 100.0 36 .............................. TCGATAGTTACTGTTGCCATGCTGCGTGTCAATCAT 456288 30 100.0 35 .............................. CAGCCCCGAAGATCGACCAACAACAGCGGGTCGTC 456223 30 100.0 36 .............................. GGTCAACGTGTGTTCGGTGTTGGTGGTGTCGGCAGA 456157 30 100.0 36 .............................. CGGAGTTGTCGGAAGGCAGCAGCCACGCCGGACGAA 456091 30 100.0 37 .............................. GGGCGGGATTCATCCCGGCGACGCTCCAAATGCCAGA 456024 30 100.0 36 .............................. AGAGTGGACACTCACCCACGAAACCGGCAACCGATT 455958 30 100.0 37 .............................. GGAGTGCCGTGTTCAGACTGATCGGGGTCGTCAGGTA 455891 30 100.0 35 .............................. ACCGCCAGTGTACGACCCAGCCGTGTCCCACCGGA 455826 30 100.0 35 .............................. ACCGCCAGTGTACGACCCAGCCGTGTCCCACCGGA 455761 30 100.0 35 .............................. CGAACCGTCGGTAGTCGGTGTGTCCCCCGAGACAG 455696 30 100.0 36 .............................. ATCAGCTGGCCCAACGCCGAGGTTCGGACGTAATCC 455630 30 100.0 35 .............................. CTGGGTGGGGCGGCCTCCGGGGCGACCGGCGGCAT 455565 30 100.0 35 .............................. GAAGACATCGACGCCGACGAAGTGATCGCGCAATC 455500 30 100.0 37 .............................. GTCGGCTGGCTGTACGTCGGCGTCGTCGTCGTGTCCG 455433 30 100.0 37 .............................. GTCGGCTGGCTGTACGTCGGCGTCGTCGTCGTGTCCG 455366 30 100.0 35 .............................. CCGTTGCCACCCGGCCCGTAGGTCAGCACGAACGC 455301 30 100.0 35 .............................. GGTGTCGCCGGGACTCGCCCACTCGGGCGCGACCG 455236 30 100.0 34 .............................. AGGCCGACGTAGTTCTCCCGGACGAACGGCTCGT 455172 30 100.0 36 .............................. ACGATCGGCGGCAACCAGCAGCCGATGCACTGCCCG 455106 30 100.0 34 .............................. CGTCTCGCTGATCCGGCCAAGGGCGACCTGCCGT 455042 30 100.0 36 .............................. GCGCTGTTCGGCGATAGTCACCACGGTGTCGTTCGT 454976 30 100.0 35 .............................. AGGTTGCCGTCGAAGACAACCGTAACGAACGACTG 454911 30 100.0 35 .............................. CACCGAGGAGTCGTTTGCGACCTGATACTCAAAGG 454846 30 100.0 36 .............................. TCGCTCGCATCAACGAGAACGTCAAACGGCAAGAAT 454780 30 100.0 36 .............................. TCGCTCGCATCAACGAGAACGTCAAACGGCAAGAAT 454714 30 100.0 37 .............................. CAGCACCGTCGTGCGTAGCTGCTAAACCTTGTCTCGC 454647 30 100.0 36 .............................. GAGGAGACGCTGGCCGAGATCGACAACGTGCAGCAG 454581 30 100.0 36 .............................. GATCGGTGCTGGTGCGGTCGAGACGCCAGCCTTAGT 454515 30 100.0 35 .............................. TATTTCCAGCGTGACTCGCTCGGTCGCGGTGGCCT 454450 30 100.0 34 .............................. AAATGTCTGTTTGTCGATCGGCTCGCTCAGATCG 454386 30 93.3 0 ............................CA | ========== ====== ====== ====== ============================== ====================================== ================== 95 30 99.9 36 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : TAGAACGGACAGTCGACCATCCGGAGTTGAACCGCAAAGTTAGCTACCAGTACCTGATGCGGCTCGAAGCGTACAAGCTCAAGAAACACCTGCTCACTGGCGAGAAATACGAGCCGTTCCAGCGGTGGTGGTGAGATGTATGTGGTAATGGTCTACGATCTGGAAGCCGAACGGACACAGAAAGCTCTCAAGATTGGGCGACGGTATCTCACTCACGTCCAGAACTCGGTGCTGGAAGGCGAGATATCGGAAGGCGATCTCACGAAGCTGAAAAACGAGATCGATGACCTTCTGAAACCTGGAGAGTCGACAATCATCTACGAGCTGTCTTCTGATACACTGCTCAATCGGACGGTTTACGGCGATGATCCGACCGAGGATCAGCGGTTTCTGTAATCACTTCCGTCGACCCCCACGGGGGACGCAGCTTATTGAGGGTTGACGGAAGGATTTTATTGTAACCAGCCGTCAGCACGCCTATGCCCCGTATATCGGGCATG # Right flank : TTCATAACCCGTGTCCTTACTCAGGTCGGGTTGCAAAATCAGCAAGCCCTCTTCTAAGTGCCTTATTACCATCTGATACGTGTTTTAGGCTCATCACTGTATCTTTTTGAACATGTTCAGCAACTTCATCCGGATCGACTTCTCCTCTTTTGAGTAAAACTTTAACCTGCTCGTCGGTCAGGGTATATCCTTCTTCTAAACAATCCAGTGCAATTTCATGTGTCTTATCTGGTGTCTCTACCTTAGGTTCGTAGGATGAATCTACAACAGTAGCATTAGGATAATAATCCCGGACAGCTTTCTCTAAACCTTCAGCAACAATCTTATTAGAATATTCTAAAGGGAACATCCGATAGATAAGACTAACAGCGGCTATGCATCCTGTTTCAACTGAATAATCATACAAATCTTGATTGTTTTCCATATTTTCGTATGTATCCTGTTCGGAATCCTTGGAAGGATCGACGTTGGGATTTTGGAATGCAGAGTTGAGGAGTTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //