Array 1 474-117 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKFG01000102.1 Halorubrum lacusprofundi strain DL18 contig113, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 473 29 96.6 36 .......................G..... TGTCGGGCGCGGGGTCAACGCGCTCATCGACGCCGG 408 29 100.0 37 ............................. CGTCGATATCAGGAGTAAGTGACATCCAAAATCAAGG 342 29 100.0 37 ............................. CGCGTCGATATAAGCAGTAAGTGTCGCCATGTCTACA 276 29 100.0 37 ............................. CTTGAATTGGGGCGACGACATGGCCGGCGACGGCGGT 210 29 100.0 36 ............................. CAACCTCATCGGGTTTAAAACAACGGGCGCGACTGA 145 29 89.7 0 T......G..............T...... | ========== ====== ====== ====== ============================= ===================================== ================== 6 29 97.7 37 GTTTCAGACGGACCTGTGAGGGATTGAAG # Left flank : GGTGAGTGATGGACGTGTGTGAGGTGTGGATGGCACAGACATGAACTAGTGATGGAGGTGGCGCTGGGTGATTAAGGGGCTGTGATGAGTGAAATGGGTAGTACGTGGAGAGCGGAGGGGCGGGGTCGGCC # Right flank : GCAAAGCAGTAGCCAGTAACACTGGAAAGGGCCGATCTGCTGAGACGACCCGGGGAGGGATTACAGCATGCTGAGACCGTCCACGTATCCCTTGTGCTCGTCGTGTCAGATGTCTTT # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCTGTGAGGGATTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 27341-31806 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKFG01000015.1 Halorubrum lacusprofundi strain DL18 contig015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 27341 30 100.0 38 .............................. GAGCCGGTCGACGACGGACCGAGTCTTAACGGCGTCTC 27409 30 100.0 35 .............................. TTGGAACCACCGACCAGATACGCGAGCGAGTAGAT 27474 30 100.0 37 .............................. GACGACGGATCGACCATGACTCAAACGTGGGGGGCGG 27541 30 100.0 35 .............................. TTATCACATCTTCGTCTGGTAAATTGAATGTATGA 27606 30 100.0 34 .............................. CACGTCGTGTATCCCGACCCGAAGATGCGCGGCA 27670 30 100.0 37 .............................. CGCCGATCGAGACCTCCTGCTCGCGTTCAGCGACGAG 27737 30 100.0 36 .............................. GATCTGAGCTACGCGTTCGTGGAGCTAGTCGACGAG 27803 30 100.0 35 .............................. TCGTCAGGGGTCAGCCCCCATGCGCGCTCAGCGCT 27868 30 100.0 35 .............................. CACCCGAAACAGTCGAAACGGAGGTCATCGCTGAC 27933 30 100.0 36 .............................. AGCCGCTGCGCCGTCATAGCGTCGAGGTCACTCGGA 27999 30 100.0 35 .............................. AGCTCGTCGAGGCGCCGTCCCCAAGCATGTTCTGC 28064 30 100.0 32 .............................. GGTCCGCGTCCGGCGGACCTCACGGACCACAA 28126 30 100.0 35 .............................. CTCTCACATCTGGTCGGCATCACTGAGCAGGACCT 28191 30 100.0 35 .............................. GACGAGTCGGTCGAGGCGACCATGTGGCTCGAGCG 28256 30 100.0 35 .............................. TTCTCGAACCCACATCGGCAGGGGTCAAACTACCA 28321 30 100.0 35 .............................. GTGGTCACCAGCGCGCACGACCTCGCCGTGACGTG 28386 30 100.0 35 .............................. GGTCGTCGTCAAGCACGATCGCGGGCTCGCCGTCG 28451 30 100.0 35 .............................. AGCGTCATGTCTACTGGGTCAGGGAAGTTAGCGAA 28516 30 100.0 36 .............................. GCAGTCACTGTCGGACCGGTTGAGGCTGTCTTGCTG 28582 30 100.0 35 .............................. GGTTCGCTGCCGACCGCGCACAGACGGGGACACGC 28647 30 100.0 35 .............................. CTCCTGATGGTCGCCGATCTCCCGCTCGATGAGCT 28712 30 100.0 35 .............................. TCGGTCATCTGGATGCGAGCGACGCGGAACCGCTG 28777 30 100.0 34 .............................. ACCGCTGATCAGAAGCTCCCCGTCGTTGTCCCGA 28841 30 100.0 35 .............................. CACAAGGAGATCGACGGCGGAACACGGCGCTGGGA 28906 30 100.0 35 .............................. GGCTCCTGGGGTAAAGCAACCCGACACGTCGAAGA 28971 30 100.0 36 .............................. CACGCCTACCAGTACAAGGACGGCCGGGAGTCGGAG 29037 30 100.0 35 .............................. CGGATCGGCGGAGTCCACGGGTACACGACTCGAAG 29102 30 100.0 36 .............................. GAGCTCTTCGCTCGCGATGACGGGCGACGGCTGGTC 29168 30 100.0 36 .............................. CGATCGCGCGGGCTGCTCGACCCACGGCAGGTCCAC 29234 30 100.0 36 .............................. CGATCGCGCGGGCTGCTCGACCCACGGCAGGTCCAC 29300 30 100.0 35 .............................. GCCTACTTCGAGCCCGATCTCGATAATCCACGCGA 29365 30 100.0 37 .............................. TCGCCGCATCTGTGGCACCTCGCCGCTCCATCGTTAC 29432 30 100.0 36 .............................. GCGCCCGGCGTCGACGCCCAGAGAGAACTCACCGAG 29498 30 100.0 36 .............................. GACGAAACATCTTACGACTCGTCGCAGGCTGACGAA 29564 30 100.0 36 .............................. TCCGGAAGGCCAGGTCACCCCGCGGGGATGTTGAGA 29630 30 100.0 34 .............................. GCAGTGACTGACGTCGACGTCCACTACGAGGGAC 29694 30 100.0 35 .............................. AACCAAGGCGCCGGCGACAAGCTCACCGACTACTC 29759 30 100.0 35 .............................. CGTTGATCTTCTGGGGGAACAAGCGGAGGCGGGAT 29824 30 100.0 37 .............................. ACACCACCCGCAACCCGGGCGCCGCCTTTTTGATCAC 29891 30 100.0 34 .............................. ACCACATCCCCCGTGGGGGATCTGACTGACCGTC 29955 30 100.0 35 .............................. GGGACGCAGGAGAAGTCGGTCGTCGGGGACGCCAC 30020 30 100.0 36 .............................. GCGAACGCCCTCACTCACGCCGTCTCACCTCGGTGG 30086 30 100.0 35 .............................. ATGGTCGATCCGTCGTCAAATTCGACCGTGACAGA 30151 30 100.0 35 .............................. GACGGAGAGGTGACGCTGTCCGGCGCCGAGGCTGG 30216 30 100.0 35 .............................. GATATCATCGAAAACGGCAAGGAAAAGGCATACTA 30281 30 100.0 36 .............................. AACAGCATATCGTAGCCGGTCGCCTCGACCGACGAA 30347 30 100.0 36 .............................. GCTCAGCGTCTTCTCGTCGATAAACAGGTGAACCCC 30413 30 100.0 34 .............................. GAGACCTGGGTAACGGAAGCGGTGGGGTGACCAT 30477 30 100.0 32 .............................. AACCCGATGAGCAACACCCGGCTCGAAGCCGA 30539 30 100.0 37 .............................. TCGTCGGCAGCGACCGTGGGCGTCGCCGTCATCGTGA 30606 30 100.0 37 .............................. GGGCGCTGCTTCGCGCTGGGTTAGACGCCCACGAAGA 30673 30 100.0 35 .............................. GACAATATCGATCGCAACAACGACATCCCGGCGTA 30738 30 100.0 36 .............................. GCCTCACGAGCGTCGACGGTGAGACTTCGGTTCCCG 30804 30 100.0 35 .............................. TCCACACCCGGCACAGGCGTCGCCGTCCGTGACGC 30869 30 100.0 36 .............................. GGTAAGCGTTGCGTCCATGGTAGCATTGTTTTGCTC 30935 30 100.0 35 .............................. TTTTGTTCTGCCTGCGGAAAGAGATGTACCAGCAA 31000 30 100.0 35 .............................. GGTGATATCGAGCACAGGCCCGAACAGCGTTTCAC 31065 30 100.0 34 .............................. GACGAGTGCGTCACCGACCAGATGGTCGTCTCGT 31129 30 100.0 35 .............................. TCGAGGCGCAGGAGGCGCTGGCCGCAGTAGGTCGA 31194 30 100.0 35 .............................. GAATTGAAAGGGAAGAAGCTCGAGTGGAAGGCCGG 31259 30 100.0 35 .............................. CTCCGTGGGAAGCGCGGTCGGGCGTGTTCTCGCAC 31324 30 100.0 35 .............................. ACTTTACCTCTGACGGCCTGCTGGCGGGATCTGGC 31389 30 100.0 34 .............................. CGACTGAACGCGGTCGCTGACGACGAGACGGGCG 31453 30 100.0 36 .............................. GCGACTCAGTGACGATGTCTGGAGCAGCCACGCGTG 31519 30 100.0 33 .............................. GGCGTCCCGTACCTCCAGCCGAACGGCAGCGCT 31582 30 100.0 35 .............................. GGTTTCGATGACGGCCCACGGGTCCGCGTAGCCCG 31647 30 100.0 35 .............................. TACCGGCCCGTCGACGCCACCGGCGCCGACCTCTC 31712 30 96.7 35 .............................C CTTCTCTGTTGGGACCGACCGAACCGAAAACCACT 31777 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ====================================== ================== 69 30 99.9 35 GTTTCAGACGTACCCTCGTGGGGTTGAAGT # Left flank : ACACTCGAACGAACAGTTGAGCACCCGACGCTGAACCGGAAGGTGAGCTATCAGTATTTGCTTCGCTTGGAGGTATACAAGCTCAAAAAGCACTTGCTAGCCGGTGAATCCTATGATTCGTTCAAGCGATGGTGGTAGATGTACGTCATCGTCGTCTACGACATGGAGGCTGACAGGACCCACCTGATGCTGAAGCTCTGTCGCCGATATCTTGTTCACGTCCAGAACTCAGTACTGGAAGGGGAAATCTCGGAGGGAGATCTAGCGACACTGAAGGGGGAGATTGAAGATCTCCTTCAGGAGGGAGAATCAGTCATGGTCTACGAACTCTCTTCGGACCAGTTATTGAACCGTACCGTGTACGGAGACGACCCGACCGAAGATAGTCGGTTCCTCTAACTGATGTCGACCCCCAGGGGGTTTGGGGGGGATTGCGGGTCGACGGAAATGATGAAGTGTATTCCACTGGTAGAGGTGATATGGTGGACAAAATCACCATG # Right flank : CAAAGTCATCCATGGTGCAATTGAGCAGAAAGGTAGTGCTTCTCGCAAAGCCGTGTAAACCCGTACTGGTATAAATAAAATAGACCTACACGAGAACACGACCAAGGTTGAGCCGTGCGAGTCATAACACACACCTGGGTATCGAAGAACCCATCTTTATTTCCGATCAAGGGAGCCCTGACCTCCTCAGTCCAAGTGGTCAATCTCCGCAGACAGATACCCCTGAAGAGCGCTGACTGTTTCTTCTGCGACAACTGAGGCCCCGAAGTCACTCCGAAATCCATGCTTGAGTTCGTCGCTCTCCAAGATTTCCAGTCCACGCTTAAGCTGCTCCCGCAGCGCATCGTCGTCCCCTCGTCGCAGGTGTGGCGTGACAGCGTCGAGATCGATTTCTTCTGCCACTGCCAGGACATCCCGAAGGTCTGTTTCACGGCCGCTATGGAGCTTTGCCGCGACGAGGACTGCCCCATCGATGACTCTGGCCGTCGTCGTCACTGTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 157-381 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKFG01000181.1 Halorubrum lacusprofundi strain DL18 contig319, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 157 30 96.7 35 ......T....................... CTCTCACATCTGGTCGGCATCACGGAGCAGGACCT 222 30 100.0 35 .............................. GACGAGTCGGTCGAGGCGACCATGTGTCTCGAGCG 287 30 100.0 35 .............................. TTCTCGAACCCACATCGGCAGGGGTCAAACTACCA 352 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 4 30 99.2 35 GTTTCAGACGTACCCTCGTGGGGTTGAAGT # Left flank : ACTGCGATGCGCGCACGAGGTCGCTCTAGGATCCGTGCGCGACGTCGATGTGACAGTCTCGATCGAGAGGTTGCCGTCGCTGAGTCTAGTGTGTCTGTCTCACCTCCCGTGGGTGGGAGTAATGTTTTCTAGTGAGGCTACCGCGAGCGACCACAAG # Right flank : GCAGTCACTGTCGGACCGGTTGAGGCTGTCTTGGTGATTCAGACTTACCCT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 76-430 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKFG01000188.1 Halorubrum lacusprofundi strain DL18 contig328, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 76 29 76.7 35 ...G.G...-....A.GC........G... TTGTCGAACACGCAGCGGCACCGGTCGAACTACCC G [81] 141 30 86.7 35 ....A........G.....C....G..... GTGGTCACCAGGGCGGACGACCACGCCATGACGGG 206 30 96.7 35 .............G................ CGTGCGCGTCAAGCACGATGGCGGGCGCGCCGTCG 271 30 100.0 35 .............................. AGCGTCATGTCTACTGGGTCAGTGAAGTTAGCGAA 336 30 93.3 36 ..A.........A................. GCAGTCACTGTCGGACCGGTTGAGGCTGTCTTGCTG 402 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ==================================== ================== 6 30 91.7 35 GTTTCAGACGTACCCTCGTGGGGTTGAAGT # Left flank : AGGGCGAGACGTATAGGACGGAAGCTACTAGTGTTGAAGCGAGGCGGCGGTCGAGGCGAGCATGTCGCTCGGGCGG # Right flank : | # Questionable array : NO Score: 3.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 7502-5384 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKFG01000036.1 Halorubrum lacusprofundi strain DL18 contig036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 7501 30 100.0 35 .............................. ACCCAGCGACGCCACACAGCGTGGTTGTCCTCGGA 7436 30 100.0 33 .............................. GTCGGCGCCGAACGCGCCGCAGACATCCTTGCG 7373 30 100.0 35 .............................. ACGACTCGAAGCCTCGACATCTCGACGTACAACGG 7308 30 100.0 35 .............................. TGGACGCCCTGCTCGTCGAGGACGTCGCGGACTTC 7243 30 100.0 35 .............................. GATGCCCAAGCCAAGTGTAGTCATGCCCGACTTGA 7178 30 100.0 35 .............................. GTCATCGCCTTCAACCGAACGGAGTGATCCTGAAT 7113 30 100.0 36 .............................. AGAACGAGCTCTTCCCCGCGTCGGTGTACGCGCGGC 7047 30 100.0 35 .............................. GACCTCCCATCGGACCGCGTCGGTGTTGCGGTCCG 6982 30 100.0 36 .............................. TCGTATAGTGAGGACGTCAGTCGGAAGGTCGAGCGC 6916 30 100.0 36 .............................. AGACTGCCGAGGAGACCTCCGCCGCCGACGTCGACG 6850 30 100.0 35 .............................. GGCGGCCCCGTCGTCATGGCGCTCATCGACGCCGG 6785 30 100.0 36 .............................. GTCGATATCAGGAGTAAGTGAAATCCAAAATCAAGG 6719 30 100.0 36 .............................. GCGACCTGGGTTGGTGGGGGACTCGCCATGTCTACA 6653 30 100.0 36 .............................. CTGAATTGGGGCGACGACATGGCCGGCGACGGCGGT 6587 30 100.0 35 .............................. AACCTCAACCGGTTTAAAACAACCGGCGCGACCGA 6522 30 100.0 35 .............................. GAACTCGTTGACATGGAGACCGGAAAGCGCCGATC 6457 30 100.0 35 .............................. GTCGGGATGCCCGGCATCGTTCTCGTCGGTGTCTT 6392 30 100.0 35 .............................. ACCGAGGGCACACTCGTCAAAGATGGGTGGAACCC 6327 30 100.0 36 .............................. GAGTCCGGAGTCGTTGTTTCGGTCGATGTATGGGGT 6261 30 100.0 35 .............................. GAGCGTCGCGCGCGCCGGCGCCGCGAGCAGCGACA 6196 30 100.0 36 .............................. TCTTGAATAAACGGCACGGCGAAGTAGACCGCCAGG 6130 30 100.0 37 .............................. GAGGACCGAGCCAGCCCGCCGAAATCCGAGGCGACCC 6063 30 100.0 37 .............................. GCGCAATTCGACAAGTCCGCGAACAACTCGAAGCCGA 5996 30 100.0 34 .............................. ACGGTCGTCTGCCCCGCTGACCCGGGCGCGCTGC 5932 30 96.7 34 ................G............. AACTGCTGGGTGGTGCTGAATCTCATCGTCGCCG 5868 30 96.7 34 ................G............. AACTGCTGGGTGGTGCTGAATCTCATCGTCGCCG 5804 30 100.0 36 .............................. CTGCTCCGCCCACGCTGGGTGGCCGGTCTTCTCGGC 5738 30 100.0 34 .............................. AGTCGTCGACGTCCAGCAACCCGGGAACAACTCG 5674 30 100.0 36 .............................. ACGGTCTCGGAGCTCCGGTCGGTCGGGATGCAGGTG 5608 30 100.0 35 .............................. AACGCCGGCGGGAGCGGTGACACCCCCGACATCGT 5543 30 100.0 35 .............................. TACTCGACAGTCGTGGGCGGCCGCGACCTGACGCG 5478 30 80.0 35 ..........A...CAGA..A......... TTGATTCAAGTCGTGAATCCCGAACAGGCCCTCAA 5413 30 73.3 0 ...CT.....A..TCA.T..A......... | ========== ====== ====== ====== ============================== ===================================== ================== 33 30 98.4 35 GTTTCAGACGGACCTGTGAGGGATTGAAGC # Left flank : CATCCCAGATTACACCGGAAAGTGAGTTTCAAGACGCTGGTTCAGACCGATGTCTACAGTCTCAAGAAACACGTATTGACTGAAGAACCGTACCATGCAACTGAGCGGTGGTGGTGAGATGCACGTAATCGTTGTTTACGATGTGCCTGCGGAACGGACACGTGTCTACCGGAAGTTGTTGCGTCGCAGATTAGAACACTTGCAGCAATCGGTGTTCTTTGGTGAGCTCACGGAGGGACAGGTCACTTCGATGAAGAACGAGATAGGGGATGAACTGGCAGAGGAGGACTCGGTTGTCGTGTTTGAATCAAAGAATCCAGCGGCGTTCGACTTCACTACATTCGGCGCGAGTGAGGAACCAGGAAGCCGATTTACCTAATTCAGCATCTAAGTTTCAGCATTTCCATCAACCCCCTGGGAGAAGCGGTGAATCGAGGGTCGATGGAAATTTATTAGTAGGTCTTGATAGAAGACGTGCTCACCCGGCCAAAGAGGGGCGG # Right flank : CTCAATTGGTAGAGCAGTCCGCTGTTACCGGGCTACAGACGGGCCCAGATTGTAATCTCCCTCTAGTTCCGTTGCTCTGAGTGTGCAACATGTTTTGGATTAGTGACCTTAGCCACACCCAAAGAAATTTCCGACGTGTCTTGGGACCGGTCAATATGGGTGATGATTGTGCACTCTGTGTCGATGCAGCTGTGTTCGACGAGGGACTCCCCCCTGAGTGGGAAGAGTACCTTCGTGATGAACGCGAGAAGACGTTCATTGGGAGTCCACGTGTTCCACTGTGCGCGGGATGTCGGCCTGAGTACGATATTCTCAAAAGCGGGGGATATGGCCCAGTCTCGACCGATGACGAGGCTGTCGTCGAACTCCTCGATGATCTGCGTCTCGATCGTATCGTGGAAAACCACGGGTTCTGACCAACACCCAGCAGTGCCGAGGACGACCTAAGGAGGTTCGGCAGACTGCGCTGCCGGAGTACCAGTTTCCCGAACCCATCGTTC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCTGTGAGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //