Array 1 53720-51645 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJES01000001.1 Halostella pelagica strain LYG-109 Scaffold1_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 53719 30 96.7 36 ........T..................... GAACTGACTCGCGGCATCCCCGGACGCGCCCCAAGG 53653 30 96.7 35 ........T..................... GACCGCCAGCACATCAACGCGCTCATGGCGGCCGT 53588 30 96.7 34 ........T..................... TGGTACCCGCGAGTCGGTGGATCTGGCACCTCAA 53524 30 96.7 37 ........T..................... GTGACAACGTCGACCAACCAGACCGGCCGACTCGATC 53457 30 96.7 46 ........T..................... CGAGTTCGTCGACGAGATGATCCGTCGCGGCGTCGCAACGCTCCGG 53381 30 96.7 36 ........T..................... TCGAATCGGTACCTCCGGTAAGTCATCGCACGGATC 53315 30 96.7 36 ........T..................... TCTGGCGAAGGGAGCCAGTATCGTGTCGACGCCCGA 53249 30 96.7 36 ........T..................... GTCGTCTGCGAACGGCCGGCTCTCGGTCGTCAGCGT 53183 30 96.7 37 ........T..................... ATGACGGCACGCTCGTCGGTCGCGGAAAGGGTGACCG 53116 30 96.7 35 ........T..................... GGGACCGGACCCAAACTGCGTGCCGTCGACCTCGG 53051 30 100.0 34 .............................. GATGAGATGGTCGACCGGGCGAAGGCCCGCCGGG 52987 30 100.0 36 .............................. ATCATCGAGAACAAGCCGCGAGCGCCACTGAACGAC 52921 30 100.0 35 .............................. CAGGCCATCCTCCGGACAGTCGCGCACCAAACCGC 52856 30 100.0 37 .............................. GCCGACCGCGAAATTACTGTCGTCGTCATTGACGACG 52789 30 100.0 35 .............................. TGCTCGGGCGCTCCGCGAGCGTTGCTCTCTATGGG 52724 30 100.0 36 .............................. TGTGCAGGACGGAAGTTGGCCCCATTGTTGATGATG 52658 30 100.0 36 .............................. GTCGGGACCTTGTACGCCTGTGCCTGTGCCGTGACG 52592 30 100.0 36 .............................. TCTTTCCCGGACCGCTGGCTGACGTAGTAAATTCCG 52526 30 100.0 36 .............................. ATCCTCGAAATCAACAACGACGATCCCGCGACTCCC 52460 30 100.0 37 .............................. ACCGACGGCGGGGATCGCCTCGACTTCATCCGCGCTC 52393 30 100.0 36 .............................. TCGGAAACCGAAACCGAAGCACGGGAGCGCCAGACA 52327 30 100.0 36 .............................. CTGTGTCCTCAAATCGCCGCAGGACAGTCCCGACTC 52261 30 100.0 37 .............................. GCCAGCAACTTCCGGGCGTCCTCCGCGGTGAGGCGTT 52194 30 100.0 36 .............................. ACCCAGTTCCGGATCGTGCCGCCCGAAGGACGGCCG 52128 30 100.0 35 .............................. CTGTCGCTGGCCTGCTGAGTCGTCTCTACCAACGG 52063 30 96.7 35 ...........................G.. ATTCGCTGCCTCGGCCTCACCGCCCGGGACATCCT 51998 30 100.0 34 .............................. ACGCACTTGAGCGCCCAAGAAGCGGCTCACAGTA 51934 30 100.0 33 .............................. GGCCTGCAGGTCACCATCCAGGGCAAACGCGGC 51871 30 93.3 35 ............T................A GTCGGGGCCTGATATGCAACAATGTCAGCAACCGA 51806 30 96.7 35 ........G..................... CACCCGCAGGGAGTCCCTGTCGTGCGTGTGGTGCA 51741 30 96.7 37 ...............C.............. GGTGCTATGGTAACCCTCGAACGACAGGGGGCGAACG 51674 30 93.3 0 ...T....T..................... | ========== ====== ====== ====== ============================== ============================================== ================== 32 30 98.2 36 GTTCCAGACGAACCCTTGTGGGTTTGAAGC # Left flank : TCGTTCTGGCTAACTGTCTCTGTTGGCAGGCGAGTAGTCCTATTCACGTTCAGGGTCCCCGACTTCAGGATGAGGTGACGTGTTACCCCTCCGTTCGGAGACTTTTATCCCGCACAGACGATGTTCTTCGCGGTCTCCAGATGTAGTCTGGCGGGCAGCCAGAAATCGGAGGTTTCTGGCCACGGCGTTGTAGCCCGCGTGGTTCTCGTTCACACATGAGTCACTCGGACACACGGTAGCGGCCGTGACATGGGACCTGTATGCAGAGTAGGAAGGCCTCGGTCGCATTGCATCTGCAATGCATCGGTCATATCGTGGGAAACGTGGTGTTCCACAGTCGTGGTCGGTGGTTATCCTCTTTCGGACTCATAGAGTCCAGAATATCCGTGCGTGCTTCCGACTTCATCGACCCCCGGGGGGTTTGGGGGGTATTGAGGGTCGATGAAAATACTGATGCGAATGCAGGCAATAGTGGCTCTCACTCGCCCGAATCAGGGCGG # Right flank : CAGTACCTCGCCCGGCGCGTCAAGGAGGTCACCGACGGTTCCAGATGAACTGACGAGTCTAATCAGCGCTCGAACACTCTGGAAATGGAAGTGTACTGTATGGCAACCCAGGTGACAACCACGTCCCAAGCCGGCCAAATCACGTCTGCCGATCTCTTTTCGTTACTTGGGAAAGTTCACACCCTCGAACTGCTCAGCCTGCTTCTCTTAGAAGAGCAGGAATCATTCCGGTTTAACGAACTGCAAGACGCTCTCGGTTTGTCTCCGAATACGCTGTCATACCGGCTTGACGAATTTGAAGTCGCTGGACTCCTGACTCGTACGACGTACGATGAGTTCCCTCCGCGCGTTGAATACGCAACTACGGAGCGACTCGATACCTTCGGACCCACTTCCGACGAACGCTCCGAGTGGATGGAAGAATACGGGGCCAACGACCTCGGCTGCCCGGACAGCTAATTACGCGTCCACATCGTTGTCGGACTCCTGACTGACATACA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.83, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGACGAACCCTTGTGGGTTTGAAGC # Alternate repeat : GTTCCAGATGAACCCTTGTGGGTTTGAAGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGTTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //