Array 1 35163-35658 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVDZ01000013.1 Fusobacterium necrophorum subsp. funduliforme strain LS_1260 contig_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 35163 30 74.2 36 G...-..T.TAA.T..G.............. TTGTTAACAGTAGATTTGACAAATCCAACTCAAAAA 35229 31 100.0 35 ............................... AAATTAGCCTTCATATCTCCTTCAAGTGTAGTAAT 35295 31 100.0 36 ............................... ATTTTACTGCTTAAATTTTTTAGATATATTGCTTTT 35362 31 100.0 36 ............................... TGGAATTTTTCCTTCTTCTAATGACTTAATGACACT 35429 31 100.0 34 ............................... ATGGGCAAGGAGGAATCTTATTTCGAAAAAACTT 35494 31 96.8 35 G.............................. CTTCGGTGTCCTGCAATGTTGAAAGCTTGGCAAGG 35560 31 93.5 36 ................G........A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACA 35627 31 71.0 0 ...C........TT....T.TAT..TA.... | G [35643] ========== ====== ====== ====== =============================== ==================================== ================== 8 31 91.9 36 AATTAGAGTATTACTAAAGTAGAATGTAAAT # Left flank : CAATGTCTCATTATCTCTTTTAAAATTATCATATGTTTTTTCGTTAATTCCTGCTATTTTATGTATTCTAGAAACGTATCTCATCATAGCGTGTTTGGTAATATTCATTCTTTTCCACCTCGTTTCAAATATGCTTCAATAATCATTCTTCTTTCTTCAATGCTCAATGGACTACAAGTAAGTTCCACAACCTTATCGTTCGTTCCAGGTAATGATTTTAAAATTTCCATTTTCGATATTTTTACCCACTTTTTCTTCTCATCTTCATATCCAAGCTCAAGTATTTCTCCAATTTTTATTTCATCACTGTCATAAATACTAATTGGAAACTTTTCTTCTTTGTCTAAAAAATTTAAACTTAATTCCATTTCAACCTCCTTATAAAAATAAAAAAAGAGAGAATAAACTCTCTTTTTGTACACTAAAAAATAATAGAACCATCTTAGAACCAAAGACAAAATATTTAAATAGATTTCCTTTGAAATCAATAGAAAATCACC # Right flank : TTTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATCTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGACAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAATGCTTTAGGAGGTAGTTTGTGATGT # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTAGAGTATTACTAAAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [8-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //