Array 1 8329-10611 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGYEN010000045.1 Klebsiella pneumoniae strain MRSN15219 MRSN15219_contig00045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8329 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 8390 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 8451 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATTATTAGAAAGC 8512 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 8573 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 8634 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 8695 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 8756 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 8817 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 8878 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 8939 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 9000 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 9061 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 9122 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 9183 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 9244 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 9305 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 9366 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 9427 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 9488 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 9549 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 9610 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 9671 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 9732 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 9793 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 9854 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 9915 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 9976 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 10037 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 10098 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 10159 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 10220 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 10281 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 10342 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 10403 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 10464 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 10525 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 10583 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //