Array 1 3533915-3530977 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQMS01000001.1 Flavobacterium sp. 83 T410DRAFT_scf7180000000004_quiver_dupTrim_4441.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3533914 36 100.0 30 .................................... GCAACAATTCATTTGTATTTGCGAACTTTG 3533848 36 100.0 30 .................................... TCACTTGATCTCCTGATAAATAAGATTTTG 3533782 36 100.0 30 .................................... AACTTCACATTTCCCCCAACTATGACAGCT 3533716 36 100.0 30 .................................... TGGCTGTCTAAATTTGTCAAGGTAGTGGCT 3533650 36 100.0 30 .................................... AAGTAAATCTTCTTAATACACAATCAAATG 3533584 36 100.0 30 .................................... TATATTGTACTTGCACGCAAGTGGTTCTAC 3533518 36 100.0 30 .................................... AGTTGGCTGAAAACAATCATTTTCTTGATT 3533452 36 100.0 30 .................................... CAATATTATCTTTTAAAAAACCTAAATACT 3533386 36 100.0 30 .................................... CTGAGTTAATGCATCCGCTTGTGCGTCTAA 3533320 36 100.0 30 .................................... CGCTTATTGCAAATTGAACAATTACACCTT 3533254 36 100.0 30 .................................... GGTTTCTTCGTTAGAGAATGACCTGGTGCG 3533188 36 100.0 29 .................................... CTGTATTTGAAACTTGAATAGCTTGCAAA 3533123 36 100.0 30 .................................... CGGTAGCCCTTTCTTAGCTGTGCCTTTGTG 3533057 36 100.0 30 .................................... CAAACACATACTGCTCATAATGCGCATTCT 3532991 36 100.0 30 .................................... TCATCTCCAAAAAGTATTCTGTTTCTAATA 3532925 36 100.0 30 .................................... ATTCTCCGTTCATAATATCAGGAAAATGTG 3532859 36 100.0 30 .................................... TAGAAAAACCATTTATTCCAGTTCTTGGGG 3532793 36 100.0 30 .................................... AAGCGTTATCTGATAATACTAAGGCAACAG 3532727 36 100.0 30 .................................... TTATCAATTCAACACCTCCATGAGCTTCAC 3532661 36 100.0 30 .................................... ATCAAAATGTTGATTAAATCCATCGTTAGA 3532595 36 100.0 30 .................................... TTCCCATTTCGCATTGTCTTCATCTCCTTT 3532529 36 100.0 29 .................................... ACGTTTCCATAATAGATTTTAGGCACCGG 3532464 36 100.0 30 .................................... GGGGAATCCTAATTATACTTACGTATATAT 3532398 36 100.0 30 .................................... GAAATACAGTTAAAAACTTTTCAAAAAATG 3532332 36 100.0 30 .................................... ATCATTATATGGTTTTACATTAGACAGAAT 3532266 36 100.0 30 .................................... TTTAGTATATTTGAATTATGAACATTATAA 3532200 36 100.0 30 .................................... AAGCGTTATCTGATAATACTAAGGCAACGG 3532134 36 100.0 30 .................................... TATTTCTTTGTTCTTTAGCATTTCAAAGGT 3532068 36 100.0 30 .................................... CCTTTCTGATTGCTGTTGATGTCTATTGTG 3532002 36 100.0 30 .................................... TGTCTTTGGCTATTTCGGCTTTCGCCAAAG 3531936 36 100.0 30 .................................... AACCATTATCGGCACTTATTCCGCTGTAAA 3531870 36 100.0 30 .................................... GCGGGACCAGAACCGCCTCCAGTTTTATTT 3531804 36 100.0 30 .................................... AGAGAGCATAAAGGACGCTTTACAGAATTT 3531738 36 100.0 30 .................................... AGCTTGCAAAAGAGATGCACTACTATATGT 3531672 36 100.0 30 .................................... TTGGGTTACAGCGGAAAGATTACGGCTCAC 3531606 36 100.0 29 .................................... ATTGGGAACACGAACATCAATAAACTCAT 3531541 36 100.0 30 .................................... TTGGTTTTTGGTCTGTGCCGTAAAATATAG 3531475 36 100.0 30 .................................... ATTCCAAATTTAGGAGATGTTAACTGCTCT 3531409 36 100.0 30 .................................... ACCCCAGAAAGGATCATCAACGGGTCTGAT 3531343 36 100.0 31 .................................... TTTATTTTTAAATCAAATTGGGCGGCTCCTT 3531276 36 100.0 30 .................................... CGTATCAGTTGGCACAATACTTCCCTTAGG 3531210 36 100.0 30 .................................... CAAAAAATACAGGCGGGAACACTTCGTATG 3531144 36 100.0 30 .................................... GCATTGAAGTAAAAGATGCTTCGATTGCAG 3531078 36 100.0 30 .................................... TTTGGGTAGGAATCCTATTTTCCTGCTGCT 3531012 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 45 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : ATCACGCAAGCTCGGAGGCAAGAAGATTATGTTGAATTCGTAAGGATGAAGTTGGATATTGCTGAAAAAAGTGGTTTTGCAAAAAAACAAACTAGAGAAGAAATGTTAGCAGAATTCAAAAGAAAATTAAATGTATAACTATGATTTAAACGAAAAAGCTAAAGAAGATTTGTTAAGAATATACGAGTACGGAATTGCTAACTTTGGTTTAAATCAAGCAGATAAATACTTTGATATGATGCACGATTGCTTCGATAAAATAGCTTCAAATCCTTTTCTGTTTCCAGAAGCTTTTCGATATCGTAAAGGTTACAGATATTGTGTTTGCGGAGTTGATACCATTTTTTACAAAATCAATGCTGATACAATAGAAATAATGGCTATCATTGGCAAGCAAAATTTTTAAGAAGTTCTTTGACATAAGTTTTCCATTGTCTTAAACATCTCAAACCACAACTGAAAGGTATGGCATCCGCCCAGCAGGGATGCAGGAGCTTTCA # Right flank : AGTTGGCTTGTTACCTTCTAATTATCAATAGAATAAGGAAGAATATCGTATAAAAAAATGCCTCTTTTTTGGATTGATAACCCAATATTGAGGCATTTTTTTATTTCTGGGTAGGTATAGGTCGCGACTTGTCCCTACACCTGTCCGTACAGTATGCATATTGTGATATAATATCCACAGATTTTCAAAAAAAAGATATAAATTAATTAGATGTAATTTCCGTACACGGAAATTGATACTGTTTTTTAAATGATAATTTAATGAAAAATAGAAAGCGAAATAGAATGTTGAGATATGATTATTCGCAAAATAATTTGTATTTCGTTACGATTTGTGTTCAAGATAGGAAGTGTTGTTTTGGGAATGTGAATACGGTAGGGACAGGTCGCGACCTGTCCGTACTTTCCGTACACGAGTCAATGAATCCGTATATGGAATTGAATGAGTGTGGTTCTATTGCAGAAAAACAATTGAATTGGTTGGCTAATCAGTATGCGTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //