Array 1 1049522-1053449 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056830.1 Klebsiella pneumoniae strain RHBSTW-00128 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1049522 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 1049581 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 1049642 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 1049703 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 1049764 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 1049825 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 1049886 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 1049947 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 1050008 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 1050069 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 1050130 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 1050191 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 1050252 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 1050313 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 1050374 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 1050435 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 1050496 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 1050557 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 1050618 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 1050679 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 1050740 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 1050801 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 1050862 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 1050923 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 1050984 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 1051045 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 1051106 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 1051167 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 1051228 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 1051289 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 1051350 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1051411 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 1051472 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 1051533 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 1051594 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 1051655 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 1051716 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 1051777 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 1051838 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 1051899 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 1051960 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 1052021 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 1052082 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 1052143 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 1052204 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 1052265 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 1052326 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 1052387 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 1052448 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1052509 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1052570 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1052631 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 1052692 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 1052753 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 1052814 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 1052875 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 1052936 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 1052997 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 1053058 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 1053119 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 1053180 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 1053241 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1053302 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1053363 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 1053421 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //