Array 1 249222-253149 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJBB01000004.1 Klebsiella pneumoniae strain EuSCAPE_UK076, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249222 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249281 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249342 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249403 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249464 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249525 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249586 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249647 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249708 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249769 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249830 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249891 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249952 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 250013 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250074 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250135 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250196 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250257 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250318 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250379 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250440 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250501 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250562 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250623 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250684 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250745 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250806 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250867 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250928 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250989 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251050 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251111 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251172 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251233 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251294 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251355 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251416 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251477 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251538 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251599 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251660 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251721 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251782 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251843 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251904 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251965 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 252026 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252087 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252148 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252209 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252270 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252331 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252392 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252453 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252514 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252575 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252636 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252697 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252758 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252819 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252880 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252941 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 253002 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 253063 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253121 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //