Array 1 142312-142861 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063846.1 Gloeobacter sp. MG652769 plasmid pGMOR1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 142312 36 97.2 45 ..........C......................... TAGGGGTGTGGGCTTTATTCTGAGCCGGGCGGTGAAGCCGTGAGC 142393 36 97.2 35 ..........C......................... TTGTTGCCACCATACCAAGTGTCAGCCCCAAGGAA 142464 36 100.0 35 .................................... TTGTTGCCACCATACCAAGTGTCAGCCCCAAGGAA 142535 36 100.0 39 .................................... GTCACTGCGAAAAAGTGCATCGAAAGAGAAGGGCTGCGA 142610 36 100.0 37 .................................... AGGCGACCAGGTTACCCAAAATCCCGACAGAAAAACC 142683 36 94.4 36 ..........C..................A...... GCTGGCTCTTGAATTTGGAAGCAATCTTTTACTCTG 142755 36 94.4 35 ..........................A..A...... CTATTAAAGACATACAAAGTACGAATTTCTCAAGG 142826 36 80.6 0 ..A.......C..................AAC.AG. | ========== ====== ====== ====== ==================================== ============================================= ================== 8 36 95.5 38 GTGATCTCGGGTCTCTGGAGGCAAAGGTGGCTGCAC # Left flank : GTCAGTTTGTGGCCCTGCTCGAAGCAAAGGCGAAATCGCGCGGGCGCGAGTTTCAGCGGGCGGTCAACGCTCCCGCTGCCAGTATTCGGGAAAAGGGGCTGGTCTCCTGGTCCCGGGTCTATCCGGGGTGGGCCGGAAGTACGGACGCAGAGGGGGGCGAAAGTTCTCCGGCGAAGCGTCAAGGAGAGCAATCTCCCCCTGGCGGGGTTCCCGCCACAGTTACCTCAACCTCCTCTACGAAGCAAAATTCAAGCTCCTCCGGTCCGAGCGGAACTACGGGCGCCAACAAAGGCCAAAAGCCAGACAGTAAGCGCACCCTGCAGTCACGCAAGGCCAAACAGGTGCTTGAAAATGCCGAAAGCCAGGTGCAGAACGCTTCCAGTGCAGTCGATCCTCCTCAGGAACAATATCAAATCGATCCCCAAAGCCCAAGGGCAAGGAGATCCACGAAAAAATCGGCAGAAGATGGGTCTGGCAGCGATTTTCGAGCACCGCCGTGA # Right flank : CCGCCAATGGAGCGTAAGCCCGGGGCGAAGCAAGGCAACCCCAACCTGGACCAGATGCGGGTCAATATTCCGGCCGTCAAGCCCGGCAAGCGGACCGTGATCATCTCCGTGCGCGTCACAGAAGACGAAGCGGACTTCCTTGATTCGCTCCCAAGCGGCCTATCAAAGAACGTTAGAGAAGCATTATCCCAGTACCTTAAGGAAGCCGGATGCCGGGGATCTGATGAGGCCGACCACATGGGCGAGGACGAGGACGACACCTATGACTGGGGAGGTGTCGATCCCTTAACGATCGGTAAGCCGGTGTACCACGATCTCGACTTGGGTCTTCTCTTCATAGAAGAAGAGTAAACGACCCGACCCTAAGCGCAAAGCGCTATAGGGCGGGCTTTGGACCTGGGCCACTCGCACGCATAGGCGCACGGGTGGGCCGATCCTTCGGGCTGGTTTACAAGCAGCCCCAAACAGCGAATATTCCTCGCCCCATTCAAGTCGGTATC # Questionable array : NO Score: 2.73 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCTCGGGTCTCTGGAGGCAAAGGTGGCTGCAC # Alternate repeat : GTGATCTCGGCTCTCTGGAGGCAAAGGTGGCTGCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1417003-1421647 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063845.1 Gloeobacter sp. MG652769 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1417003 36 100.0 35 .................................... AATTGCCTGTACCGTCGGATCCCCCTCTTCGCAGC 1417074 36 100.0 36 .................................... TAGAGAAAAAGAAACCAAGGAGAGAACAAGATGAAC 1417146 36 100.0 37 .................................... CACCCAATTTACCACAGCGTAAAAGGAACCTGTACCT 1417219 36 100.0 37 .................................... ATAGGGTCTACAGTCAGTGTTCTTATCTGCTTATCGA 1417292 36 100.0 35 .................................... CCGCTCTACCAGGTTCATTTTTGCTAGTTCTCTTG 1417363 36 100.0 35 .................................... TTGATGGCCGTGCGGTCGAGCCCGGAGCGGTCGGA 1417434 36 100.0 36 .................................... ATGAAATTGAACTTGAGTGGCCACGAGAACAAAGGG 1417506 36 100.0 34 .................................... CGCCTAGTCGCTCTAGGTAACGGCCACCTTGCTT 1417576 36 100.0 38 .................................... AACTGCCGGATTGGCTTACCGCAGCCCGGGCAGTCGAG 1417650 36 100.0 36 .................................... AGACGCAAGCCCCCGCCCACTGGCGCTGAAAAGCCT 1417722 36 100.0 37 .................................... GTCCAATGCTCCGCAGACTCCGATTGTGAAGCCATAT 1417795 36 100.0 35 .................................... AGACGCAAGCCCCCGCCCACTGGCGCTGAAAAGCC 1417866 36 100.0 37 .................................... CCTGCCTGTGGGGCGCCACCCTCTCCGGGGCATAGCG 1417939 36 100.0 37 .................................... TAGAGCAAGCAAGGAGAGCGAGATGAAAGACCTGAGT 1418012 36 100.0 34 .................................... TCGATGGGCCATAGCAGTGAGTACGTTCCTTTGC 1418082 36 100.0 35 .................................... TCGGTACGGAAATTGCTGTCACCGAGGCCCCGGTG 1418153 36 100.0 37 .................................... TAGTGGTCGATCACCGCTTGGACTGCCTGGGCGGTCC 1418226 36 100.0 34 .................................... CCTGCCTGGTCGGGGCCAATCTGGCCGAAGCCGA 1418296 36 100.0 38 .................................... CCAACCTGGCTGGGGCCTGCCTGGCCGGGGCCAATCTG 1418370 36 100.0 37 .................................... CGCCGTCTTTTGAGTCTTGCCCGGAGTCTCTTTCCTG 1418443 36 100.0 34 .................................... CGGTTATTTTCTACCGTCCAAAGAAATCTAGGAT 1418513 36 100.0 36 .................................... TATACGTCATCGAAAGAGTCCTTTCTTTCGTCGCTT 1418585 36 100.0 36 .................................... CGACAGCAAACAATGCCGCCGCTATCACCAACACTA 1418657 36 100.0 34 .................................... GAGTCTGGCACGACGCCTGGCTGAAGCCAGGATT 1418727 36 100.0 34 .................................... ATTCCTCTGCCGGTTCTCCTAGCTCCAGCAAGAT 1418797 36 100.0 37 .................................... TCCTGCAGCGGAGATTTTGTTACGCCGGAATCCCCAC 1418870 36 100.0 36 .................................... AGAAGGCAAATTTCTGGCCAAGCTCGCCATCCTTCA 1418942 36 100.0 38 .................................... GAAGGCGGCTATCGACATCAAAGAGCGCAATACGGGAC 1419016 36 100.0 37 .................................... CTATCGACAAACGCAACATCCGCACCAGCGCGACCAC 1419089 36 100.0 37 .................................... AGGCGCTCCTCGAAGTTATCCGGCACCAAGATACTGG 1419162 36 100.0 35 .................................... TCTTATGAATCCTCCTCCATCCCTCCGGTAAGTAT 1419233 36 100.0 37 .................................... CCAATAATTGGCACGAACGTCAACTTATATTCAGTCA 1419306 36 100.0 36 .................................... ACCTCGTGCTCCCGGCGGGTGCCGAGAAACTCCCCG 1419378 36 100.0 36 .................................... GCATCTGCGGAGCTCCTTGATCACTCGAACAACCAT 1419450 36 100.0 36 .................................... TATACGTCATCGAAAGAGTCCTTTCTTTCGTCGCTT 1419522 36 100.0 36 .................................... CGACAGCAAACAATGCCGCCGCTATCACCAACACTA 1419594 36 100.0 34 .................................... GAGTCTGGCACGACGCCTGGCTGAAGCCAGGATT 1419664 36 100.0 34 .................................... ATTCCTCTGCCGGTTCTCCTAGCTCCAGCAAGAT 1419734 36 100.0 37 .................................... TCCTGCAGCGGAGATTTTGTTACGCCGGAATCCCCAC 1419807 36 100.0 36 .................................... AGAAGGCAAATTTCTGGCCAAGCTCGCCATCCTTCA 1419879 36 100.0 38 .................................... GAAGGCGGCTATCGACATCAAAGAGCGCAATACGGGAC 1419953 36 100.0 37 .................................... CTATCGACAAACGCAACATCCGCACCAGCGCGACCAC 1420026 36 100.0 37 .................................... AGGCGCTCCTCGAAGTTATCCGGCACCAAGATACTGG 1420099 36 100.0 35 .................................... TCTTATGAATCCTCCTCCATCCCTCCGGTAAGTAT 1420170 36 100.0 37 .................................... CCAATAATTGGCACGAACGTCAACTTATATTCAGTCA 1420243 36 100.0 36 .................................... ACCTCGTGCTCCCGGCGGGTGCCGAGAAACTCCCCG 1420315 36 100.0 38 .................................... ATCACGTTAAAAGAAAGAATCGAGCTTGTTGCCTTGGC 1420389 36 100.0 35 .................................... TTGTCTTTTATTTTTCCTAGCCTGCCCTCTCCCCC 1420460 36 100.0 35 .................................... ATGATTTGCATGTGCGGCTCCTGTATCAAAACACG 1420531 36 100.0 35 .................................... GTGATCTGTTGCAGGCTCAAACTCACTGTAAGGCG 1420602 36 100.0 36 .................................... GTGCTGCTGACGGTGTGCGTCGTTGCCCCTGCATTT 1420674 36 100.0 37 .................................... TTCGAACAAGTACTTCTCTACCTTTAGGCGAAGTTGT 1420747 36 100.0 35 .................................... ACAATCAGAATGTGAACTGGGGCACCAGCAGTAAT 1420818 36 100.0 36 .................................... GAGCGACTGGTAAGCTACTACAGAGCAGCGGTATTT 1420890 36 100.0 35 .................................... TAGGGTTGCTCATTGTTGATGCTCTTGGAGTGCCA 1420961 36 100.0 35 .................................... GAGACTGCTGTAGCCTACGACCAACCGGGTGAGCG 1421032 36 100.0 37 .................................... ACTACTTGGTCAAGCATGGTAAGGCGGCATTCGACAA 1421105 36 100.0 36 .................................... TGTACGTGGATGGGCGCACGGCCCAAAATTATCAGG 1421177 36 100.0 34 .................................... TCCACGGAGCTATCCCCGGGAATGGCAAACACCG 1421247 36 100.0 39 .................................... AGCCAGTCCAAGGGAGGAGATAATAACAGTTTCTTTTGT 1421322 36 100.0 39 .................................... ATTTTTTGCAATCGCTGCTCTGGCGCGGGTTTGACGATT 1421397 36 100.0 35 .................................... TGGGTGATTCGTATCCTTGTGCCTGATTACTGAGT 1421468 36 100.0 37 .................................... ATTACCTGCTCGCCAAAGCGATAACTCAGGCCGCTCA 1421541 36 100.0 35 .................................... TACCGGACGAACGCTTCCTCCGCTTTGGCACTCAG 1421612 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 65 36 100.0 36 GCGATCGAATCAGTGACTCCGGAAGGAGTTGAGCAC # Left flank : GGAGCTAGAGCGTCTACGGTGGGAACTTGCCCGCATACTCACCGAAGAGGACGACTTGCTGATTATCGGTCTGTGCAACCGTTGCGTAGAGAGGATCGTCGCCCGCAACCGCGCGGAGGCGTGGCCGATCGATGAAGATCCATTCCTCCTATGCTGAGCGTCCTAAGAACGGCCATCAGCGGTTCACGGATCTGGGCATGTTCGTAAATTTGAAGCCCCCATTGACATCAAGTCCAGTCAGGAAGCGGCTTTTGGGTATTTCCTGGCTTAGACTAATGCCTGAAAATCGCCAGGAACCGCCGGAGACCCTTCTTTCCTCAGTAATGATCTTTGATTTCGTGGATAATGTGTCCTGGAGCGTGAAAGAAGCCTCCAACAAGACTTTCAGGCTCTATTACCATCGCCCCACAGTCAAAAAAGGAGGTAACCAGCAAAATGCAGAGCCAATACTTGAAACAATGCTCCAGTACCCTTAACTGGCAAGGTTTTCAAGCTCCGCT # Right flank : CATCCTACTTAATTGCTCAGGGTAAGCGCGTCTAACTCTCTATTGATAAAATGCGTTTAGCGTGGGCTTCCCGCTGGAGCGAAGACACAGGCTGCCATTGATAGGCTCAATGAACGGCAGCCTACCGACTTGGGCTTGACAATTCACCTCCCATCACCGTGCAAAAAGAAGCCAGGATGCCTGCTCGGCAGAAATTTCACGCTCTTTTCGTTTTGTCAAGCCTTGTTAAGATGCGCTTGCCCTGAGGTTAACACAAACCCGCCAGGATCCTTGGCATCCCGGCATGTTCGCCACTGGATTACTGCTCGCTTAGCCACTGACGCAGTGACTCCGGGCCGCTAAAATCCAGCAACGCTTCGCCCAGCTGCTCCAACTGATCAACCGACAACCCTTCAACTTGCTCGCGGAGAGGCGTTTCCAGCGGGCCGATCCGTCGCACCAGCTGACGGAGCACAATATTGCGGGCCTCCTGCGCTCGGCCTTCCTCGCGGCCTTCCTCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGATCGAATCAGTGACTCCGGAAGGAGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.30,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 2 3687377-3683817 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063845.1 Gloeobacter sp. MG652769 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================================================== ================== 3687376 36 100.0 41 .................................... ATGACCAGTGGGAACTGGCCGGTCAGGCCATGGATTACGGC 3687299 36 100.0 42 .................................... GTCAAATCAGCCCCGGTCAGGTCAGCCCCGGCCAGGTTCGCC 3687221 36 100.0 42 .................................... TTAGATTGGCTGAATTCAAACGCCTTAGTAGAGCCCATCAGT 3687143 36 100.0 38 .................................... ACGACTCCGCCAACTTGTTGTCAAGATCGGTCAGTGGG 3687069 36 100.0 38 .................................... TGAGCAGCCGCTTCTGCAAGTTCTCAAGTTCCTTTTGC 3686995 36 100.0 36 .................................... TTTTATTCTCGGCGCGCGCCGGTCTTCCCCCCTCCG 3686923 36 100.0 41 .................................... AATGCGGGCATTGAAGCCCTCACGGTAAGCCTTAGCTACCA 3686846 36 100.0 38 .................................... CTAAAACCTTTTATCTGCCTCGATTGTTCAGCAGGGAG 3686772 36 100.0 36 .................................... CTCCTTTGACTTGGGCATTGTCTACGGCATGAAAGT 3686700 36 100.0 43 .................................... CGAATAGGTCATCGGAATACTCCCGCGCTGACGTTGGCATCAA 3686621 36 100.0 43 .................................... CTGAATGCGCTTTTGGAGCTCCGTATCGGCCTTGACCTTGGCT 3686542 36 97.2 37 ...............................A.... CCTGGTAGAGATCATCAGCCCCCAGCCCATCGTCGGA 3686469 36 100.0 50 .................................... CTCCAGTTCATCGAGGATGGCCTGCACCTCCGATTGGGCGTACTCGGCGC 3686383 36 100.0 39 .................................... CCGATGGGATCGGGATCGATCAACTCCTCAATGTCGAGG 3686308 36 100.0 50 .................................... CTTCGAGCAAAGACTTGAGAGATCCTCACGGGTACTAGCTCAGGCCCTCG 3686222 36 100.0 42 .................................... CCAGCTCTGGCGCATGGACGGCGATGGCGACGACGCTTCTGA 3686144 36 100.0 69 .................................... CCGCAGTTCGTGGGCGGCGCGGTACTCGCGCTGTTTGTCGTCGCTCGGGTAGCGCGGGCGGCTCATTAC 3686039 36 100.0 44 .................................... ATCCTCTGGCCTTATAAGAGCAGCCCAAAAAGTGTTCAAGGCAG 3685959 36 100.0 41 .................................... GCCTCCGCCAGGTTGGCCGGGCGGCCTGCTTCGCCGTGGGT 3685882 36 100.0 42 .................................... TTGCCTGATGCCCAGTGGAAGAACAACTCCCACAACTCAGCT 3685804 36 100.0 39 .................................... GGCAGAGGGTCTGTTGTAAATCGAGCCATAGGCATTAAG 3685729 36 100.0 39 .................................... ATGCCTGATTGTAGCAGCGTCTTGACCGCACTTCGAGCA 3685654 36 100.0 37 .................................... AACCACGACGAGATCCTCTGGGGCGAACACCGCCCGG 3685581 36 100.0 52 .................................... AGGTTGGCGACCGTGAGGTTGGCGCCTGCCAGCTTTGCGCCGGTGAGGTTGG 3685493 36 100.0 40 .................................... CGACCGTGAGGTTCGCGCCTGCCAGCTTCGCGCGGGTCAG 3685417 36 100.0 40 .................................... AGATCGGCACCGGTCAGGTTCGCGCGGGCTAAATCGGCGC 3685341 36 100.0 42 .................................... AAGAAGAGAGTGATATTGAGAATAGTATGGATTGTGAAATAT 3685263 36 100.0 41 .................................... GAGCTGGGCTTCGTGTTCCCCGGCGCGCTGCACGTCGACCT 3685186 36 100.0 38 .................................... GCTTGATAAACTCGCAAAACGCGATCAGGTTAGGGCGA 3685112 36 100.0 44 .................................... CTCCCTGCCTGGGAGGCTTGAGCGGCCAAAGCGCAGCTTTCACG 3685032 36 100.0 44 .................................... GTACGCGATGGCTTCAAGTAGCTCATCCATTCTGACGGAGTCCA 3684952 36 100.0 38 .................................... CACCCGCAGATCTTGAAGTTATCTCCCATGATCTGGAA 3684878 36 100.0 49 .................................... TTGCAAGGGTGCGACAGATTCTATTCCCGGTTCGCCCCGGCCAGATCGG 3684793 36 100.0 37 .................................... CCCACAGGTTCGCCCCGGCCAGTTTTCCGTCAGCCAG 3684720 36 100.0 43 .................................... CGTTTCGGGGGCTTCTCTTGATGTCAAGCAATCCGCTTGGCTA 3684641 36 100.0 40 .................................... ACGCGAAACTGGTCGGGGCGAAACTGGTCGGCGCCGATTT 3684565 36 100.0 42 .................................... CAGTTCTTCTAGGCCTTTGTTTGGGTGGCCAGATAAATTCAG 3684487 36 100.0 40 .................................... AGATCGGCACCGGTCAGGTTCGCGCGGGCTAAATCGGCGC 3684411 36 100.0 41 .................................... ATCCCTGGAAACCGGTAACTGCGTCACCAACCTCTGATAGA 3684334 36 100.0 44 .................................... GGCAAATTCAAGACCGACAGCATCGATCACACGCTGCTCGTCGG 3684254 36 100.0 59 .................................... CCTGGGTGCAGCCGGGCGGCGAGTTGCCGCGCCGCGCCGGGGTGAGTTCGTTTGGCTTT 3684159 36 100.0 39 .................................... TCGCCATGACCAAAGAATGCCCCCCAGAAGTCGAGTACT 3684084 36 97.2 44 ............................C....... CGTCTGTACAGTTTGAGAATTCTCCAACCTCCCCAGAAGCTCCG 3684004 36 100.0 39 .................................... TTCTGCAGCAAGCTGCTCATCGACGAAAGAATCCACCAA 3683929 36 91.7 41 ...T............A.........T......... CCTCTGAATGACACCAGTTCTTGCAAACTGATGTCCCTCAT 3683852 36 77.8 0 ...T............A.A.......CTGA....C. | ========== ====== ====== ====== ==================================== ===================================================================== ================== 46 36 99.2 42 GTGCGCTCTTCAGTGCGGGAGCGATTAGTTGGAAAC # Left flank : AACTGGTTGCCTACCGCATCCGCTGACCATGCTCTGGCTCGTCGCGTACGACATTCCTGTCACCAAACGGCGCAATAAAATCGCGAAGTTGCTGCTCGGCTACGGCAAAAGAGTCCAGTACAGCGTATTTGAGTGCGATCTGGACGACGAGAAGTTTCAACAGCTCAAATCCAGACTGGTCAAGCTCTTGCAACTCCCCGAAGACTCGCTGAGGTGCTATCCGCTCATCGAAAATTCCCGTCCCAAAATCGTCGTCTACGGTGGCGATGAACCTTACAAAGCGCCGGACTACATCGTTGTTTGACACTAACTTTCCGCCCTCGACGATCTCCGCCCACCCTCTGCAGTGCCGGTTTCTCGTAGAGGTCGTCGATCCATTGCAGCACAAGGCTTTGAGCCTTTCCAAACATACAAATGCTTCTCAGGACTCTGCCCGATGCAAAGAGATCGTCGCATCCTTCTCCTGGAAACTGCTCTGGGATTGGACTACACTGGTCGCT # Right flank : CTCATCCCCCCAGCCCCCTTCTCCCCGAGGGAGAAGGGGGAGCAAAGCCAGCCGCACGGCGATCCTGAAAACCGGACGTTGAGCCACTGCCACCCCTCTCCCCTCGAGGGGAGAGGGGCCGGGGGTGAGGGCTCTCTTGCTAAAGTGTTGCCGTCCTGGTTGAGAAGGATGATCTTGCCGGTACTGACTTGCTACCTGCTGGTTGCGCCACCGGCGGCGGGCAAGAGCACCCTGGCCGTTTACCTGGCCGAGCGCGACCCTGCTTTATGCGTCGTGTCCACCGATCAGATCCGTGCCGAACTGTACGGAGATGCACGTATACAGGGGCAATGGACGGCTATCGAACGGGAAGTACTCTTCAGGGTACACAACGCCTTTCGCTCCGGCAGGCCGGTGATCTACGACGCCACCAACGCCAAACGGTCCTGGCGACTCGCGTTTTTGCAGCAGATGGCCGTCTATCCAAATGTGCAGTGGGTGGCGTGGCAACTGGTGGTTCC # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTCTTCAGTGCGGGAGCGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 3 4905076-4907018 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP063845.1 Gloeobacter sp. MG652769 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 4905076 36 100.0 34 .................................... AAAAGCTGAAAGCTGGGCGCAGCAAAGCCTCTAG 4905146 36 97.2 38 ................A................... ATCTGACCGGCGCCGATCTATCTGGCGCCGATCTGTCT 4905220 36 100.0 34 .................................... GCTTACCCTGATGCGCAATTGCCTGGGCTTATAA 4905290 36 100.0 38 .................................... ACTCTCAGACTTCCCCCAACACTCCCAACTCTCCGAAT 4905364 36 100.0 37 .................................... TCAGGCAGGCCCCCGTCAGGTCCGCGCCCGTCAGGCA 4905437 36 100.0 38 .................................... GTTACTCAGATTGGCCCCGGCCAGACCGGCCCTGGCCG 4905511 36 100.0 34 .................................... GCCGGCCAGGTCGGCGATCCCCAAATCCGCGCCC 4905581 36 100.0 41 .................................... GCCTGATAAAAACATAGCTCGATCAAGCTTTGCTGCATGGC 4905658 36 100.0 36 .................................... AGCCACAAGGCGTGGCTCTTGAGGATCTCGCTTAAG 4905730 36 100.0 37 .................................... TTTCTCGCTACAAAGGCAAGCCGATTCAGTTTATGGA 4905803 36 100.0 36 .................................... AAGAAGAGTGCAAAATCCCTGAGCTAAGATTTGCAG 4905875 36 100.0 38 .................................... AGGTGCACTCTCTACAGGATCCCGAAAAGGTAAATTAC 4905949 36 100.0 37 .................................... CCCGGCTATTCGTTTAGTCGAAATCAAGCGTTTACTT 4906022 36 100.0 36 .................................... TTCTTCGCCGATTGGCTGACAAATTTATTTTCTTTT 4906094 36 100.0 35 .................................... AGGCCCCGGCCAGGTTGGCACCGGTGAGATCCGCA 4906165 36 100.0 40 .................................... GTGAAGGCGCTATCCACCACACTTGAAACATCAGCAGTCT 4906241 36 100.0 38 .................................... CGCTAGTGCTTCCTCCCTGCTCCGATATCTTTGGATTT 4906315 36 100.0 37 .................................... TTTGTCAGGCTTGGCATTCTTCCCGACCCGTCGATCA 4906388 36 100.0 38 .................................... AGAATTCGTTTTTTCCTCTCGCCCGGCAATTAAAAGGT 4906462 36 100.0 39 .................................... TCTTGCCTCTCGAACGCATCAGCTTTTGCCAGTACAAAA 4906537 36 100.0 41 .................................... CTCTCAGGGGAATACTCGCGATGGGCATAACAATATCCAAG 4906614 36 100.0 39 .................................... GCCAGATCGGCCTCGGTGAGGTCGGCGCCGGTCAGATCG 4906689 36 100.0 40 .................................... GAGCCACGCCCTGTGGCTGGATACCCGCGGCGGGGCCGGT 4906765 36 100.0 35 .................................... GATGGCCGCTCAAATTGAGCTTTAACATTTCGGGC 4906836 36 100.0 38 .................................... GCAACCCATCCACGGTGGTGGTGCTGACCAGATTGCGC 4906910 36 94.4 37 ..............................CA.... GTGGCAGTAGCCAAGGTACGGCTGGAGATCGCGCAAA 4906983 36 72.2 0 ...A.....GTCC...C.........C.GC.....T | ========== ====== ====== ====== ==================================== ========================================= ================== 27 36 98.7 37 GGCGCTTCCACAGCAGGAAGTCGAACTAATGGAAAC # Left flank : CAAGTTAATCAAACGCCAGGGCTACGGCTTTACAAACTTTGAGAACCTGCGCTTGCGGCTGCTCGCTGGCTTTGCCAAGAAGGGATGCTGCTCACCTTGAACTCAGGAGAGCCATACGGAAACCGGGTCCAGTTGAGCGTATTCGAGTGCGACATTTCGGATAAACTGCTCACGGAATTAAAAACCAAGCTCCGCAAAAAAGTCAGGCTAGAGGAAGACTCTGTACGCTTCTACGTCATTTCACATCACACACGGGGGCAGGTCGAAGTATGGAATGGTCCACCGGTAGTTCAACCCGCAGGCTCAGTGGTGATCTAGCTTGCGACGGGGCCGCCCGGAAACTAAAGACCCTCAAATCTCGTTCACCCCGTCGAACTGGCCCAGAGCAAGGTTTTCCAGGGCTCGATCACACCAACATCACCCCCAAACCCCGCTGCACGGAACACCCCGCCGCAAACCCCTCCTTGACACCGCTCTGCACAAGCCTTTCCATAGATGCA # Right flank : TCGCCATTGGCTCAATGTGTGCGGACGCAGAGGTGATATGCGCGGTTGGTCTGCCTATCGCTTACACCGATGACTGGGACCATCGCCGGCCTTCTCGCGCCGCGCTGGGCTTCCCTCGCGCTCCGGCTCTCAACAGATTTTGCGGTACCATGATCTCTATCCACGCCTGGGAAAAATGCATTGATCCGTAAAATGCGAGGAGAACCAACAATGCAACAAACACGAATGCATTATGCGGTAATCGCCATGGCTGCGACTGTGCTTGCCACGGCCGGCTGCGCCGATCGTCGGCAGCTGGACCGCCCCGAAGCGGCGCGTCTGATTGCCGAATCCAACCAATTCACTGGGCGCCGCGACTTCGAGATGTTTTACGAAGGCTCTACCTACCGCAAACCCCCCACTCCCATCGAGGCCACCCTCAAAGCTCTCGGACTTGTCAAATCTCTCCCTTCGCGCAGCGGCGCGATCCTCTCGCTGACCGATAAGGGCAAACAAGCGTC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGCTTCCACAGCAGGAAGTCGAACTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //