Array 1 170076-172403 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011914.1 Eubacterium limosum strain SA11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 170076 30 100.0 36 .............................. TCAACTTCTCCAGTAAATCCAAGGTATCCGTCTCTC 170142 30 100.0 35 .............................. CTGTTTCTGTCCCAATAGTCCAGCTCCAGCTTTTT 170207 30 100.0 36 .............................. ACCGTTATATCAAAAATCTTAAGAAATAATACTTGT 170273 30 100.0 36 .............................. ACTCAGATGCCCTTTACAAGTGGACGTTAGAGGAAC 170339 30 100.0 37 .............................. GATGATTTGATTGATACGCGAACCGTCAACTTAGGGT 170406 30 100.0 36 .............................. TTATTTATACCGAAGCCCTTTATGTAAGGGATTTAC 170472 30 100.0 35 .............................. CTGTCGATATATTCGGTGATTACTTCCTCTACACC 170537 30 100.0 35 .............................. TTTTCTTTAATACCAAAAAAGCAAAGAGCAATCTT 170602 30 100.0 34 .............................. TTGAAGAGGTAGATGTGACCACGGCGGCTGCTGG 170666 30 100.0 37 .............................. AGTCCATCTTTTTCTTCTCCTACCATTGCCGCATTAA 170733 30 100.0 36 .............................. GGTTCAGGCGATAGACGATACGCTATCTTCATGGGC 170799 30 100.0 36 .............................. GTTTCACCCGGCCTTTTGCATACACCTTATCAACTA 170865 30 100.0 37 .............................. CTTCAACCACAGGGTGGTATTTTGCATTTTGGTTTCT 170932 30 100.0 35 .............................. GAAAAAAAGAAAGCGCAGCCCTGCCGACCGGAGAA 170997 30 100.0 36 .............................. GATGGTTTCAGCAGAAGTTATTGACACTGGAATTGA 171063 30 100.0 35 .............................. AGTTCTAAGGCAAATTCTCAGTTGAGGTTACAGGT 171128 30 100.0 34 .............................. ATGCGCAGAGAGATTATTGATATCGTATGGAAAG 171192 30 100.0 37 .............................. TAGGTGCGGAACACCCGATACACCCCGGCAGGCCGAT 171259 30 100.0 37 .............................. TTATTTGCGCTGTTGGGCTCATGGCACATCGGCCGCC 171326 30 100.0 36 .............................. TGAGCAATCCTTATTTTGTGGTGTCTTTGCTGGCGT 171392 30 100.0 35 .............................. CCAAATGCGAATGATATTAATGTCGAAATCTTAAC 171457 30 100.0 36 .............................. GCGAACAGGAGGTTTCCTTTTGTGACCCGACGAAAA 171523 30 100.0 36 .............................. CTGTTTTCCCATAATAATTGCACCCGTGTTTCATGA 171589 30 96.7 36 .......T...................... ATATACCGGGCCGTGTGGCACAGTACATCATAGCAA 171655 30 96.7 36 .......T...................... TTTTTACTCCTTAGCTTTTTAGGGGTTCAAACGCTG 171721 30 96.7 36 .......T...................... GGGACGATTGTTCAAGTCATTGAAGAACAAAACCAG 171787 30 96.7 34 .......T...................... GAGGCCCCGTGGGCCGACCAATGGGAGCGCATAC 171851 30 96.7 36 .......T...................... ATGCTGTTATTGGTCATCAGGGCGTAGGTGGTTTCA 171917 30 96.7 35 .......T...................... AAGGTTAGTGGGCACTCGGTCGGTTCAAGGGGTTC 171982 30 93.3 35 .......T.....................G TTGGCTTTCTGGTTGATGGCCGTCGCGGTTTCGGA 172047 30 93.3 36 .......T.....................G CGAATACTGTTATAATACTGTCTTACAACTAAACAT 172113 30 93.3 35 .......T.....................G CGGCCAACGGCCGGACGAGCTTAATCTTATTATCT 172178 30 93.3 36 .......T.....................G AACTAAAGAGATGTCCCTTCTGCGGGGGAGAAGCGA 172244 30 93.3 35 .......T.....................G GAAAGAGGCGGTTTTTCATTGTCCGTATCATTTCA 172309 30 90.0 36 ...A...T.....................G ACGAATTAAGGGAAAGCAGGGATTCACTACGAGAAC 172375 29 93.3 0 .......T...............-...... | ========== ====== ====== ====== ============================== ===================================== ================== 36 30 98.1 36 GTTGAAGCTTAACATGAGATGTATTTAAAT # Left flank : TTTATTCCGTTTAATATGGGAGAAAGGCAATGAGTGCAAATAAAAATTTTAATTATAACTATGCCTTTGTATTTTATGATGTCAATGAAAAGCGTGTGGCAAAGGTTTTTAAAATTTGCAAAAAATATCTTGTGCATTATCAGAAGTCCGTATTTAGAGGCGACATAACCCCATCAAAATTAATTACTCTGAAAAACGAACTGAAAAAAACCATTGTCGAAGATGAAGACTTTATCTGTATTGTAAAACTACTGAATGGAAATGTCTTTGGAGAAGAAGTTATGGGTATCTCCGAATCCTCTGAAGATCTTTTCCTGTAGCTCAGTTTTACCAGGCACAGAAAAAAACAAAATGTCGGAATCCTTTTAAATAAACAGTTTGTGCGCTATCTGAAAGAAAAACTGACGAAAGTTTGTGCAGCTGGTAAATTTATTGAAAAATGGCTTAAAATCAAAGGTCTTAGAGAATATGAATAGAAGAAGAATGGCTTGTTTATTATG # Right flank : TCACAAGGACATCAGAGATAAAAGAGATTGTTAAGAATAAAGACGTATATTTAAATCGGGGTTTACTGGAAATGAAAATATCGAGGCAATATATTCACCGTTCTCAGATAGCATTGAAGAATAATAAAAGCTATATTTATCAACATAAAAACTAAAACCGCCAGCTTACGCTGACGGTATAACAAGCTTTTATTCTTCCTCATCACTTTCTAACAGAGCATCCTCCTGCTCAGCATAGAGGCTGTCCAGCTCTTCATTAAGCAGTTGGTTTGCAAGAATAACCTCCTTAATTTTCTGGACCAGGCCAGAGGCGGTTAGCAGGCAGGCTGGGATAATGATGAACCAGAACATATGGAACATACTGACTTCGCCGCCGGTAAAAAAGGTGTATATCAGCCCGCCAAAGCACCCGAGCATAATGACCACTGTCACGATGAGGGTGGCGTTAAAGGACATATCCATGGTCAGAGCCACGAAAATGCAGAGAACAAAAAGAATCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 414389-416064 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011914.1 Eubacterium limosum strain SA11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 414389 30 100.0 35 .............................. TTGGGACGATATTATTTCCGATAAAGTCCCCAATC 414454 30 100.0 38 .............................. ATTGCAACGGCACCTTAAAGGTTGGCAATGTCCACAAA 414522 30 100.0 35 .............................. GGTTCGACTTTTTTTGGTGCTCGTTTCTTCGGTGC 414587 30 100.0 36 .............................. TCGACTACAACGGGCTGGCGTTTAGCTGGACGCTTC 414653 30 100.0 35 .............................. AAAATGCCGGAGGTTACTTTAATTTCCCGCATTTT 414718 30 100.0 36 .............................. ATCTCCCTCCCGTCTTGTTTCCCTTGTATGGCTTTA 414784 30 100.0 35 .............................. CATTCATATTTCTTTATCAAGCCATTTGTGATTCT 414849 30 100.0 36 .............................. AAAACATATAAAATCGGCAAATCAATACAAAGTTTA 414915 30 100.0 35 .............................. TAGTTCTGAGCAAAAGATATAGAAGAACTAGACTT 414980 30 100.0 37 .............................. GCGGCATCTCTCATAGTATTCTTTGCTGTCTTGCCAA 415047 30 100.0 36 .............................. GCCAAGCGGCTTGTCCGGTATGAATGTCACCCCAGA 415113 30 100.0 36 .............................. GCTCCTTGTACGCCATTTCCTCTTCTGGCTTATTAT 415179 30 100.0 36 .............................. GTCGCCAGTTTTGTAAAAGCGTCATTCGTTCCAACG 415245 30 100.0 36 .............................. TGCTTTTAAAATGGCGGCTCGTCATCATCGGCCATT 415311 30 100.0 36 .............................. ACGAACGGAGCGCTTTGCGGGCCGTGGGCCGTCAAC 415377 30 100.0 37 .............................. TGAGGGTTATTAGGTGGGACATGAGGTTTTTCTGGCT 415444 30 100.0 36 .............................. TGTTAAACGCGCCGCCTTCCTTTTGAAGGGCTTCCA 415510 30 100.0 35 .............................. TTGATACAGAACGCGCCTGAGGCGATGAGTTTGTC 415575 30 100.0 36 .............................. AGAGCGCCCCCGGTTTCAAGCAAAATCTCAAATTCC 415641 30 100.0 35 .............................. GTGCAGTATACAACGCCGGTGCCATGCCTTTCGCC 415706 30 100.0 34 .............................. GGGTGTCCCTGTTGTAAAAGCGTTCACCGCCCCA 415770 30 100.0 37 .............................. ATGGGGCGGCCTTTTTCTTTCCCTGTTTTCTTATCAA 415837 30 100.0 35 .............................. TAGGCCCCATTAAGTTCAAAGGTTAGTGGGTACTC 415902 30 100.0 36 .............................. TCGGAACTGTTGACGAAATCGCGAAATACTTAAAAA 415968 30 100.0 37 .............................. CCCTCTGCTGTTTGATGTGATGTAAAACTTGTTATTC 416035 30 83.3 0 ....................ACC...TT.. | ========== ====== ====== ====== ============================== ====================================== ================== 26 30 99.4 36 GTTGAAGTTTAACATGAGATGTATTTAAAT # Left flank : TACGCGTTAAGAATCATAGGCAGGTCTCCTGGCTTACGGATTAACATAAACCGACGCCTTCCCTTTCAGTGGCACTTGCCGGTCACTACCGCTTACAGTGATGGGTTCGCTCAGGACTTTCACCTGATTCCCTATTCTCCCCTTGTGGGGCACCATATCATTCACAGTTATTAACTTGGTTTTATTATAACGGCATTTTTTTCTTTTTGCAAGCGTTATCTGCAATTTTTGATGTACTATAAAAAAACCATTTCAGGAAAAGCCCACTGGGAGTTGCCCTCAGAGGGTTTTGCGCGTATAATTTTATTATGAGAAAACTTTAAGAATTTACCAGGCATATTTTGGGACAGACGAGAAAAAAGAACCGCAGGTAAAGGCTTTAGAGAGAAAACAGGATAAAAATATCATAAACCTTACCCGCCTGGTAAATATGGCGAAAAATGGCTGACTCAAAGGGATAAGAAGGAATTTGTTGTTTTAAGATCGGCTTGTTTGCTATG # Right flank : TTAAACAATATTTTACAAAGCTTTTCAGATTAGATTTTGCGAATGCTCAGCATAGTCTTTCAGGCTGTTGTGATATTAGGGTTCCATGTTTTAGAAAGATTACGAAGCAGAGGAAGAGATTGGGCTGGGTTTAAGCATAGTGTCGGATAATGGATAAAAAGATGAGGAGGGAAGTGCATGCTTTCGAGGGAAGCTTTTCTGGAGAAACTGAAAAAAGAAATTGAGGCAGAGAACCATTTGATTGCAGTCGCATCTGGAACAGGACTGACAGCAAAATACGCAATTCAGGGCGGCGCTGATTTTCTTCTGGCCTTGAACTCAGGCATTTTCCGCGGGATGGGGCGAGGTTCTCTCGGCGGGCTTTTACCCTACGCCAACAGCAATGATATGGTCTATGAGTTTGGTGTACGGGAGCTTATTCCGCTGGTAGGCGATTTTCCTGTTATATTTGGCTTAAACGCCACAGACCCTACAAGGGATATGACCGCTTATCTGGATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAGTTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //