Array 1 1032509-1030185 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMEE01000001.1 Hyunsoonleella pacifica strain CGMCC 1.11009 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1032508 45 89.1 30 ......T...CGG..-.............................. TAATTTTTCATTTAAACCAACAACAACTCA C [1032505] 1032432 46 100.0 30 .............................................. AAGGCTGGTAAATTGTCTTTGGCTTTGGTA 1032356 46 100.0 30 .............................................. CCTATAGGCTGCCATGATGTCCCGTCCCAA 1032280 46 100.0 29 .............................................. CCGTATTTTTACCGTTGTATTTTTCAATA 1032205 46 100.0 30 .............................................. ACAATCTTAAAAGATAGATTTGACAATGGA 1032129 46 100.0 30 .............................................. TAACCTAAATAATGTATTTCATTATGTTGG 1032053 46 100.0 30 .............................................. GAATAGTTAGGTTAGAATCTAACGGCTCTA 1031977 46 100.0 30 .............................................. TTCGCCTGCAGAAATTGTATTGGTTTCTAA 1031901 46 100.0 30 .............................................. TTCGCCTGCAGAAATTGTATTGGTTTCTAA 1031825 46 100.0 30 .............................................. TTGCTGATACTGTACCGTGTTGGTCTACTA 1031749 46 100.0 30 .............................................. ACCTATTTATTTGTTTTTGCACATATTTTG 1031673 46 100.0 30 .............................................. GTTGCGGTGTAATGCACTTGTAAAACGCAG 1031597 46 100.0 29 .............................................. TATCATGTTACGCACAGTATGAGCTGTGG 1031522 46 100.0 30 .............................................. AGCGATAAAGAGTGCGGTGGCAAATGAACG 1031446 46 100.0 30 .............................................. GTGGTTTGATGAGAATAAAACAAAGTTTTG 1031370 46 100.0 30 .............................................. AAATCTGTCCAATGGATGATTTGCCCACTA 1031294 46 100.0 30 .............................................. GCTAGCTAGTGCAATTAGCCATGGTAGTAC 1031218 46 100.0 30 .............................................. TTTGATGTCTTTTACTCCTCTAATGCCTAA 1031142 46 100.0 30 .............................................. TCCTCTTCTGGAGGCCCCCCCGCCCCGCAG 1031066 46 100.0 30 .............................................. TTTAGCACAAAATTAAGTGATGACCAAATA 1030990 46 100.0 30 .............................................. GACAGCCCCTAGAAGCTTAACGGTTTACTG 1030914 46 100.0 30 .............................................. TTTGGCATAAATTCATTTTCATCTTCGCCT 1030838 46 100.0 30 .............................................. GGATATACAAAAAAAAGCAACAACATCTAG 1030762 46 100.0 30 .............................................. ATACCCAACAAAAGAAACTTTATAAGCCTG 1030686 46 100.0 30 .............................................. AAGGCGATAGTTTTTGTTATCGCTCTCATG 1030610 46 100.0 30 .............................................. TGGGAGGTATAGATTTAAAAAAGAACCGGA 1030534 46 100.0 30 .............................................. AACGGAACGCGCTATGGGTATACTGTTGCG 1030458 46 100.0 30 .............................................. AACAACCATATTCATGATAAAAGTATTGTG 1030382 46 100.0 30 .............................................. ACGACAAAACCATCTATTATCACATCCGTA 1030306 46 100.0 30 .............................................. TTATCATTTACTTATACCATTGGCGAACAG 1030230 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 31 46 99.6 30 GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGAGAATTCACAGG # Left flank : TGGAGTACTTTTAGATAATTGGGATTTAAGTGTAAAAAGAGCAACATCTGTAGTTCGTGTATTAGAAGACTTAGGTGTTAAACCTGGTAGGTTAATCGCTGCTGGACGTAGTTCTTATGTGCCATTAGTTGATAATGAAACTGCAGAAAACAGAGCAACTAACAGACGTACAAGAATTGTTGTACTTCCAAAATTAGATCAATTCTATGATTTGATTGAAAAAGAAATGAAAAATTTAGAAGCTGGAGGGAATTAATAAAATCCTTTTAAATAATCATATAAAAGCTCAACCGTAAGGTTGAGCTTTTTTTGTTTTGGTATCATGGCGTTACCCACAAGGGGTCAGGCTTTATTCATTGGTCAATATTTTTTATTATTGTATTCATGAATGTTAACATTTCAGCAGTCGCTCCCTCCTACGTCGGGGAGTTTCAATCACGCCATAGCGTGACTTCAATCCTTAACGCAAAGCACTATTATTTTTTTAGAGGATTTCATCG # Right flank : ATACTTACTGTAACAGGCTGGTATCCTGTTTTTTATGTTATGGGTTTGGATTTTAATAATTTGGCTTTCAAATGGACTTCGACTGCGCTCAGTCTGACATTTTAAGTTCTATTTGTATAGTATTTGAGATGCTGAATCGAGTTCAGCATGACAGGGCGTGTTTAAATGGATTCCTGCCTTCGCAGGAATGACAATCCTAAAAAAGTTCCAATTGTTGTGACGGTGGCTCCAAATCGGCTTCTTTTTGACCATGGAACAGTTCCATCATCCCAAATTGCTTATCGGTAATTTGCATGATACATACCTTTCCTTTTTTTGGCAGTGCCTTTTTTGTACGTTTTATGTGTACGGTAGCATTTTCTCTGCTTGGGCAAAATCTGGTATAAATGCTAAACTGAAACATGCCAAAACCATCATCTAACAAATTCTTTCTAAAACGTGTCGCTGCTTTACGCTCGGTAAGCGTCTCCGTTGGTAAATCAAAAAACACCAATACCCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGAGAATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.39%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //