Array 1 941701-943578 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083637.1 Gemella haemolysans strain FDAARGOS_1500 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 941701 36 88.9 29 C...A...T...A....................... GAAAGATACAATTAGATTACTAACGGATA A,C [941703,941713] 941768 36 94.4 29 TG.................................. GAAAGATACAATTAGATTACTAACGGATA 941833 36 94.4 30 TG.................................. TATCATACGTTGGAAATAGAAGATAACATT 941899 36 100.0 30 .................................... GAATGTTGTAACACTTCTGCCAATCTTGGT 941965 36 100.0 30 .................................... TACTCATCTGGAGTACAGCTTTCATCAAGA 942031 36 100.0 30 .................................... TGTACTATTGAGATTATTCATTAAATCATC 942097 36 100.0 30 .................................... TAACTCCTAATCTTTACAACTTCCATAAAT 942163 36 100.0 30 .................................... AGGAGGTTTAACAATGAAATTAAAAATTGC 942229 36 100.0 30 .................................... GTATATACTAACGAACCATCAGCTGTATTT 942295 36 100.0 29 .................................... TATGGTGTTAAGTATGCAAACGGGGAATG 942360 36 97.2 30 ......................T............. AACTATCAGACACAATAGGGCAAGAGGCTC 942426 36 100.0 30 .................................... TTGTTCGGGATGTAATAACGCTCATCAGCG 942492 36 100.0 29 .................................... TTTGCTGTTCTATCAAACGTTTTTTTCTA 942557 36 100.0 30 .................................... GGAAATCTTAGTAAAGAAAACTTTGAAATG 942623 36 100.0 29 .................................... GCAAATTACCACCAACTGTCCAATTAGCC 942688 36 100.0 30 .................................... AACATGGATCAAGAGTTAAATAATGTCGAA 942754 36 100.0 29 .................................... ATTCTTGATGTTTGGGGTGGCGAATATGA 942819 36 100.0 30 .................................... AAAGTTTTCGGTACCTTTATTTGTGGCGGT 942885 36 100.0 30 .................................... CGGTTGGTGGGATTACATGGTAGACGGTCT 942951 36 100.0 29 .................................... ATCGAGGGTCGACAAATTAAAACTGAAAC 943016 36 100.0 30 .................................... GTGCTAGATGGAACGATGTAACAAATGCAC 943082 36 97.2 30 .....................G.............. AGCAAAGATAGAGCGAAAATTCGCCGTTTT 943148 36 100.0 30 .................................... AATCAAGTGTTCGATGGAAGAAATCTTGCA 943214 36 100.0 30 .................................... ATTAATTTAGATGGATGCCAAAATTTATAA 943280 36 100.0 30 .................................... ATTGATAGAGTTGAGAGTCTATGTCAGGAA 943346 36 100.0 29 .................................... AATGAATTTGAACAGCGTGTAGCTCAGTT 943411 36 100.0 30 .................................... CATCAAATTTACAGACAAACTGTAGGAAAT 943477 36 100.0 30 .................................... TCAAAGAGTAACATAATATCCACCTACTTT 943543 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.0 30 GTTTTGTAGAATTCAAAATTTACATATCTCTCAAAC # Left flank : GCCCTACTTCTATGAAAGCCGGTGTTGATGTAGTAAGTAGTTATGATGACTTCGATTATAAAACACTTGTTCTAGGAAGTATGTTCGAACTAGGACCTAACGAAGTTAACTATCACGGTGAAGTTGGAGAATATATTTCTGAAAACACAAACGATATCGACCTAGTAATCAGCGTTGGTGACCTAGCAGAAAACATTACAAAACAAATTAAAAACGACAAAATAAAAACACTACATTTCCCTACTACAGCAGAAGTTAGTGAATATCTAAAAAATAACAAACACAAAAACGAAGTTATCTTATTCAAAGCAAGCCGTTCTATGAAACTAGAGACTATTATTGAAGAGATAACGAAGTAAGAGAATATTTAAAAGCGTTTACGTTTATTGAGATTAACGTAAATGCTTTTTTCTTTGTTCTAGCAATAGTTCTACTTGAAATTATGTAAACAAAAATAAGATTATAGATCAAATAACACTCAATGTTATCTCATCAATAAT # Right flank : CCTCAAATTGAGATTTAGAGAAGAAATTTTGAATTTGGGTATAAAAAAATGGACCGACACCGATCCAGGCCCGAAGGCAATTTAGATAAAATCTTTATTTGAACTTGAATGTAAATTTTGAATCTACCTATATTATACAAGTATTTTCATAAAAATGCAATACTATATTTCACAATTATCTTTATCAAAAATATAAACTATTTCTTTATAATTTTTTGCAGATAAATTATTAAATTGTTGATACTCTACATTTATGATATTTATTTTATTCAAACATACTTCTTTATAAATTTCTATTATTTCTTCTTGCGTGAAAACGGTGTGAAGTCCTACTACAAAAATAATTTTAAAACAACATAGTTCTGTTAATACTTTTAAGAATTTTACAAAATTTTCTAAAATATCATCATTTTCAACATGTATTTTAAAATCCCCTAGTTTTAATAACGACGACATATCTATCTCTTCACCTTGTTCAATTTCTAAAGAACTATTAAATA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTAGAATTCAAAATTTACATATCTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //