Array 1 944985-946276 **** Predicted by CRISPRDetect 2.4 *** >NC_022196.1 Fusobacterium nucleatum subsp. vincentii 3_1_36A2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 944985 36 100.0 30 .................................... TTTTTCTTTTCTCGTAAACAATAAAATTCA 945051 36 100.0 30 .................................... TGCTTAAAACTTATAAAGAGACTATGGGTG 945117 36 100.0 30 .................................... ACATTATTGGAAGTTGTGAAGGTGGCTACG 945183 36 100.0 30 .................................... GAAAAGGAGACAATAAATTTGTAATGTTAA 945249 36 100.0 30 .................................... TTTGTTTTCTTAAATCATCATATCTTCTTT 945315 36 100.0 30 .................................... CTAAAAACTTACAAAAAAATACATTGAATA 945381 36 100.0 30 .................................... AAAAAATAGCATTTTTCTAAAATCTTATAA 945447 36 100.0 30 .................................... AAAAAAGAAGTAAATTACAGAGGTCAAAAA 945513 36 100.0 30 .................................... GTGTACCTTTTGATTTAAGATACAGTTATT 945579 36 100.0 30 .................................... TCAAGAGATTGAATATTAGAAGAACATTGG 945645 36 100.0 30 .................................... AGAAATTCTTAGCACATCTTAAATCAATGG 945711 36 100.0 30 .................................... TAATGATGTAAACGATATGTAAACACCTAG 945777 36 100.0 30 .................................... AAATAATTGACCTATTAAAAACTTTATGTT 945843 36 100.0 30 .................................... ATAGAAGTTGTAAAACATAGAGCAAGAGAT 945909 36 100.0 30 .................................... TTTAGATACTTTATAAGTTTCGACTTCTAC 945975 36 100.0 30 .................................... CCAGTAATCATATTCAGAGCCTACTATTTG 946041 36 100.0 30 .................................... TCATTACTCCAAGTTGTCCTTGTCTGTTCT 946107 36 100.0 30 .................................... GTTTTGCTGGGTTTACTGTATACCAGCTAT 946173 36 100.0 30 .................................... GAAATTGAATTTGAAAGTATTAAGAATTCT 946239 36 83.3 0 ..................C.......C.G..T..CT | AA [946260] ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.2 30 GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Left flank : TATTATAAGGAATTAAAAAATTTAAGTGAAAATGAGTTTTTAAATGAAACTTTAGAAATTAAAGAAATTTTAAAAGATTATATTAATAAATTAATAGAAAATAACTATTCATTAAAGTTTGAAGATGATTTAGATGTTAGCCAAATTTTAAAAGCATTTAGTATAAAATTTGAAAGAAGTGAGGACTTATTATTAAATTTATTTGAATGGCTAAAAATATTAAATGAAATCTTAGGATATGAGATATTTTTCTTTATAAATATAGAAAATTTTTTATCAGAAGATGAATTACTAGAATTTTCTAAATTTATAGTGTATAATAAATATAAAGTTGTTTTTTTAGAAAATTTTTATAGAAATAAGTTATCTGATAATGATAATTTAATTGTTATAGATAATGATTTATGTGAAATTTTCTAATCTATTTAGAAGCATTGAATGATTCGTAACCATTTTGATTAATTTCAGCTTTCAGTATAGACCTAAATATATGAATTGAG # Right flank : TTTTTTCTATTTTAAAATAACAAAAAAGGGGCATTTGAAAAATAGCTATTTAAAGTAGATTAAAATAATAGTGAAAGAAAAACTCACAAGCTTCTTGTTCAGTTTGAAAATAATGTTCATCTGTAAAAGCATGACTATCAGTATAACAAACTATCCAATTATCCTCTCCTTGAATCAAACACACATCATTAAAATGTAACTCTGTTGTTATATAATAAGTTTTAAAATAATATTCTTTTGGTTTTTGAGCTTCAGCTTCTAAAACTTTTAAAAGTTCAGGAACAGTTTTTATTGGAAGATATGATAATAACTTTTGTGTTCTAAGTTCATTCTTTTTTTCTGTATGTAAAGTTGCAAAATATACCCATATTTTTAAAACAATAACAACAGGTAAAACACAACAAAAAAGAACCATAAGTAAAATTTTAAATAATATCATATATTTTTTACTCCTTTAAAATATATTAGTAATCTTCTAAATGTTCTAATTCAAATTCAAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: F [matched GTTTGAGAGTAATGTTATTTTAAATAGATTCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //