Array 1 8-1369 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFL01000020.1 Klebsiella pneumoniae strain C16 NODE_20_length_100223_cov_22.8767_ID_39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8 27 82.8 30 ...-........G...AC.....-..... GACCCGAGCGATCCGGTCAGCCTACGACCT 65 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 126 29 86.2 28 ....................A.CCG.... ATCCCACAATTGCGGCGGTTGAGATTGA TA [147] 185 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 246 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 307 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 368 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 429 29 100.0 32 ............................. TTCAATACCAGGGGCAGGTTCAGCAGGTCCCC 490 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 551 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 612 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 673 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 734 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 795 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 856 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 917 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 978 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 1039 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 1100 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 1161 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 1222 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 1283 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1341 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 23 29 97.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GGACTCCG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.68 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 865-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_NXFL01000032.1 Klebsiella pneumoniae strain C16 NODE_32_length_71274_cov_24.7325_ID_63, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 864 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 803 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 742 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 681 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 619 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 558 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 497 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 436 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 375 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 314 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 253 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 192 29 100.0 31 ............................. GGACCCCGAGCGACCCGGTCACCCTCGACCT 132 29 100.0 34 ............................. CCGTCGAACGGCGGTTAGTATCCATCTTGAGTCC 69 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 14 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GACCGATCCCACAATTGCGGCGGTTGAGATTGAGTGTTCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //