Array 1 133448-135792 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN173678.1 Fusobacterium periodonticum 2_1_31 acIQb-supercont3.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 133448 30 100.0 37 .............................. AGCAGTTAGAAAATACTTAGGATTAAATTAAGGAGGA 133515 30 100.0 36 .............................. GCATTTGCTGTCTCAGTTCTTCAGCATTAGCTTCGA 133581 30 100.0 37 .............................. GTTATTAAAAATAAGCTCATAGGCTTACTAATGACTA 133648 30 100.0 37 .............................. TTAAAGTATGCAGTACCCAAAGCATGTCTTGGATTCT 133715 30 100.0 34 .............................. TACTTTTCTAAAGTAGAAAACATCACAATTTCAA 133779 30 100.0 36 .............................. GCAGAGCTAGAAAATTTGATTAATCAAAAAGTTGAG 133845 30 100.0 37 .............................. GCAAAATATTTTTATTTAACATTTTCAGTAATATGTA 133912 30 100.0 36 .............................. AATTTTGAATAAAAAATATTTCCTTTTTCTTTTGAC 133978 30 100.0 37 .............................. TTTCAAAAGTTTTTCCAGCTCCAACTACATGAGCTAA 134045 30 100.0 37 .............................. AAAAAAAATAAATTATTAAAGGGAGCTGGGATATACG 134112 30 100.0 36 .............................. CTTACTTCTCCTGCTATAAGTCTATCAGGTCTTTGC 134178 30 100.0 36 .............................. AGAAACCAATCCATATATAATCTTGTAAGTCCCTCA 134244 30 100.0 36 .............................. GTCATTTGTGAACTATCATAAATATCATTCCATACA 134310 30 100.0 36 .............................. TCTTGATAAGCACTAGCTTTTTCCATCATATTTCCA 134376 30 100.0 37 .............................. GATAATAAAGGAATTGTAAACTTAATGAACGATAAGG 134443 30 100.0 36 .............................. GCTGGAACAAAAATTTTAAGTCATGAAGAGTCTAAA 134509 30 100.0 36 .............................. AAGAAGTAAAAACTTTCTTACAAAAACAAGGGAATA 134575 30 100.0 38 .............................. CTCTCAGAATGGAATATAACAGAGCAAGAAGCTTTAAA 134643 30 100.0 36 .............................. AAGTTAGGGGCTATTGCTGAGTGGTTTCATAGCAAA 134709 30 100.0 34 .............................. TATTTAGCAGAGGCTTTTTATAGTAGAGCCTCTA 134773 30 100.0 37 .............................. TACTTTCGCCATACAGCTTTGATACTGTATAACTTTC 134840 30 100.0 36 .............................. GCTTGAATCTGCACAAGAGTAGTTTTGTTTTTTAGA 134906 30 100.0 36 .............................. TTTTGTTACCATTAAATTTAATCTAATTTTAGCTAA 134972 30 100.0 35 .............................. TAGTTCTATTCAAAGTATTTGTTTGTCTAATATCC 135037 30 100.0 36 .............................. GGTTGTATCTATATAAAAGATCAAGAAAAGGAAAGG 135103 30 100.0 35 .............................. GGAATAAATATAACTAACTATGAAAAATTAGATAA 135168 30 100.0 37 .............................. ATAAAATTAAACAATGGATTTATATTAGATGGAGCTG 135235 30 100.0 36 .............................. AGTAGCCTTATCGTCTATTAAAGTTTGAAATGCTAC 135301 30 100.0 37 .............................. GCTCTTTCTAATGAAAAGGTATCAGACAATCTTTTGA 135368 30 100.0 36 .............................. GGATAATTACTTAAAAAATACTCAGTTTTTTGATAA 135434 30 100.0 35 .............................. TCTAGTAGTAATTTATACATCTGATTATTTGGATG 135499 30 100.0 36 .............................. TTTTTTTCAGTGTTTCCACTGTTAATAATTTGTTTA 135565 30 100.0 36 .............................. CAAGTGCAGGGATAAAAACTTTGTTTGGACTTTCTA 135631 30 100.0 35 .............................. ATCAATTATTATCTAAATATGCTAAGTTTCTTAAA 135696 30 96.7 37 ...T.......................... TAATTTAGCCCTAAGTATTTTCTAACAGCTTGATTAG 135763 30 76.7 0 A..T........G......A.GT..A.... | ========== ====== ====== ====== ============================== ====================================== ================== 36 30 99.3 36 CTTAAAGTATTATCATATTGGAATTTAAAT # Left flank : AGCTTTTCAAATGTGGTGGTGATAAAATGTATGTTGTTGCAGTATATGATATATCATTGGATGAAAAAGGTAATCGTAATTGGAGAAAAGTTTTTGGCATTTGTAAAAGATATCTTCATCATATTCAGAAATCTGTTTTTGAAGGAGAATTGTCTGAAGTAGATATTCAGAGATTAAAATATGAAGTTTCAAAATATATTAGAAATGATCTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGTTAGGATTACAAGAAGATAAAACAGATAATTTTTTATAAAATTTTATTGTCTACCTTAGATAATGTAAAATTCTCAGTACTTCGACAAATATTATAAAAGCATTTATATTAAAAGAATTTTTTTTATATTTTAAAATCTAAAAATATTTAAATTTTTTATTTTTTAATAAAAGGTTCAGATTGACAAAAGATAGTAAAAAAAGTATTATATCAGAGTGAGATTTATAGCCTCGT # Right flank : TAGAATTTTTTGAATAGACAACTGATACAGGAAAAATTCAAAAACAAACATATATAAATAAGTGATTGCTTTTTAAGAAGATTTATTATAGAATAGCACCAAGAGGTGATAATATGCTGGAAACTATTAATAAAAATCAAGTAAATGTAATATTAAATAAAAATACTGATGAAATAGCTACTTTAATAGAAAAACATAGAAATACTATGATTACTTCTAAAAAAATAATAAAATTAAAAAAATTATTTAAATATACATTAGTTATTATTGCTTTATCTTTGCTTATAATAGCTATTCCTTTGTACTTAGTTACTTTAGTTATATTAATTATAAGTAGTATTAGTATATTAAAATCAATTATTTAATAAAAAATAAGTTTTGTTTAAAAACTCTTATCAAAAAAGATAAGTGTTTTTTTATTGCCTAGAAGATTTATGGAAGAAATTAGAATTTCTTTTAGTTTTAAGTATTGTCTTATTTGAAGTTTTGATAATGAGATT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAAAGTATTATCATATTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 343074-343925 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN173677.1 Fusobacterium periodonticum 2_1_31 acIQb-supercont3.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 343074 36 100.0 37 .................................... AAAATTAAGGAAGAATTAGGGCTTGGAGATACTTTTA 343147 36 100.0 41 .................................... TTATATAACCATTGTCAACCAACCAAAAATATAACATTTGA 343224 36 100.0 38 .................................... AGACTTGTTAGAAAATTGTACAGAACATCCTTATAATA 343298 36 100.0 42 .................................... TTTAAATCCGTGAAAAATATTAAAATTTTCTGTTTCTTTCAT 343376 36 100.0 34 .................................... TTTATGGAAGAAACCTTGTAATAATCTATTCATA 343446 36 100.0 36 .................................... TACCTATATAAATAACTTCCCCTGCTCTAATAATAG 343518 36 100.0 38 .................................... GTTGAATTTATTAGCTTTACATCCCCCTTTAATACCTT 343592 36 100.0 41 .................................... AATAGCTATTACAGTATTATATGATTGAAAAATTAAATCTT 343669 36 100.0 37 .................................... AAGAATTTCTCTTGTGTGGTTAGATTTTTGGATGTGA 343742 36 100.0 40 .................................... TTCTTTTCTCTTTAAAACTTTTCTAAGATATTCATCAAAT 343818 36 100.0 36 .................................... TTGATATATTTTAATGTTTCATTATCAAGTTTTTCA 343890 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 12 36 100.0 38 ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT # Left flank : ATATTATTTCAAATAAGAGAAGAACACAATTATCAAAACTTTTAAGTGCTTTTGGTTTTAGAATACAAAGATCAGCTTTTGAATGTTTATTAACAAGAGAAAAATATAAGTTACTTGTTGAAAGAATTAATAGATATGCTAAACCTGAAGATTTAATAAGAATTTATCGTTTAAATCAAAATGTAATAACTGAAATATATGGAGAAAACTCAGAAGCAGAAAATGAAAATAAAGCTTATTATTTTTTCTAAAAAAATAGAATCTCTCAACTAAGATTGGGAGATTTTTTATTTGTTGAAAATTTAAATAAAACATGTTAGTATGTAACATATACCAAGAGAAATCCTAAGGTTATAAAAAAATATTAGTTAGACGATATTCAAAAAAAGAGGAGTTAAAGATGCTTTTAACTGAAATAAACAAAAAAAATTCAAAAATAAAAATATCATACGATAACACTCTAAAAAATTATTGCAACAAAAGACTTTTTTGACCATAGG # Right flank : TTTCTACACCATAGAACTATATTATCCCCAGTGCTATAATAAGAATGAATGATACTCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 346752-347638 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN173677.1 Fusobacterium periodonticum 2_1_31 acIQb-supercont3.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================== ================== 346752 35 100.0 43 ................................... TTTTACCAATGTTCTTTTAATATCCATAAAAGGATAAGTACAA 346830 35 100.0 44 ................................... TAAATTTAATATTTTTAATTAATTATAACCATTTTTACCAGTTC 346909 35 100.0 39 ................................... TCCATATAGAAATTATTAATGTTATTATCAGTAGTATCA 346983 35 100.0 43 ................................... TTAAGTAAAAATTCTATAAGGAGATATACTATGAACGAAACAC 347061 35 100.0 43 ................................... TTATTTTTATATTGATAGCCTATTATAAATTTTTGTGTACTTC 347139 35 100.0 41 ................................... CAATCCACCATTGTTTTTAACCATTTCTTTTAATTCACTTA 347215 35 100.0 41 ................................... CTTTATATTCATTTTTACCTCCATAAAATTTAATATTTTTT 347291 35 100.0 43 ................................... CCCTTTACCAAATCTTAAATCTTGAAATAGAAAATTACTATTC 347369 35 91.4 46 ........A...A.......A.............. CTTTTCTTTGAATATATGACTGTTTATAATTCTTATATTGTTTCCA 347450 35 97.1 41 ...................T............... CAATCCACCATTGTTTTTAACCATTTCTTTTAATTCACTTA 347526 35 94.3 43 .....................C....G........ CGCATTAACATTATCTCTTGAACAAGAAGTACCAGCTATAACA 347604 35 91.4 0 ..................T.............T.T | ========== ====== ====== ====== =================================== ============================================== ================== 12 35 97.9 43 ATAAGAATGAATGATACTCCGTAAGGAGACGGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAGGAGACGGAAATATACTTCCACTTTTAAATTTTATCATATTAAAGCCTCCCTT # Right flank : TTGTTGCCATAATTAAGTAATCTAAACTTCTATAAAAAAATTTGATTTATATGTTAAACTGTAATAGTTAATGAGGGGATGAAATTGAAGTTAAAAGTGAAAATACTTTAACTTCTAAAGATGAGAATAATCACACAGAGCCTTTTGAATTTTTATAAATAAGAGAATTTTTTATAAAATTTAAAATTCTTTTTTTGTTCTATATAGCCTTTATTTCTTGAAAAATTAGATAAAAGATGCTAGGATACAATATATAGAATTCTAGATTAGAAAAAAGATAGTAATTGGATAATATCTAAAAAATGAGGAGTTAAATATGCTTTTATTTGAAATAAATAAAAAATCTCAAAAATAAAAATATCACACAATAACATTCTAAAAAAATATTGCAATAAAAGATTTTTTTTGAATATAGTATAAAAGTGAATATAACTTCATAAGGAGACAGAAACCAAGCAACATTCTTCCAGTGAATTACATTTAACATAACTAACTATAAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAATGAATGATACTCCGTAAGGAGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 349096-348054 **** Predicted by CRISPRDetect 2.4 *** >NZ_KN173677.1 Fusobacterium periodonticum 2_1_31 acIQb-supercont3.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 349095 36 86.1 43 AA.A..A................T............ GGAAATAGGAGCCTTTTGCTTAAATGATGAAAATTTTGTTAAA 349016 36 100.0 41 .................................... GCAATTGATGAACTACCTAGCTGGAATCAACGAGTTGCAAA 348939 36 100.0 36 .................................... CTAAGGAGTTAAAAAAATATATAGCCGAATTTATGG 348867 36 100.0 45 .................................... TCTATTTAGTACAATTAAATAATAACTTAAATAAAAATATATTAG 348786 36 100.0 42 .................................... AAAATTACATTAAATAATGTAATCTATCCATTAAATGCTATA 348708 36 100.0 37 .................................... GTGAAAGCTCAGCTGTAACATTTGCACATGCTACTCA 348635 36 88.9 41 ..............G.A.....CT............ AAAGAAGATGAAATAGTTGAATCTTTTCATAATATCCCTGA 348558 36 97.2 41 ...............T.................... TCTGGTATTAGATTCTTTGAATACCCAGTAGTTAATTATAC 348481 36 94.4 43 ...............T.......T............ CTGTTAATTGGTGGATTAAATTAAATGGACTGAACTTAGTTAT 348402 36 97.2 43 ..................T................. TTACAACAGAGGAATTCGAGAAAAAGAAAAAAGAGTTATTAGG 348323 36 91.7 40 A......................T.......A.... CAATGGCACTAAAGAAAGGAATGGACGTTGAAGAAATTCA 348247 36 94.4 43 .......................T.......A.... ATGCCAAAAACTGATGGATTATCTACTGAAGAAGTAATCAAAT 348168 36 97.2 43 ....T............................... AGTTAGTTATGTTAAATGTAATTCACTGGAAGAATGTTGCTTG 348089 35 83.3 0 .....T.........T.A.....-.....C.T.... | T [348069] ========== ====== ====== ====== ==================================== ============================================= ================== 14 36 95.0 41 GTTTCCGTCTCCTTACGGAGTATCATTCATTCTTAT # Left flank : TTAAATATAAAATCAAATGGTTTCCGTCTCCTTACGGAGTATTATTCATTCCTATTAGAAAAAATATTTGGAGTAAACTATAAAGAATATCAGTTTCCATCTCCTTATGAAGTTATATTCACTTTTATACTATATTCAAAAAAGAATTGTATCATAATAAATTTTTAGAATATTACCATCTGGTATTTTTATTTTGAGAATTTTTTGATTTATTTAAAATAAAAGTATATTTAACTCCTCATTTTTTAGATATTATTCAATTGCTATCTTTTATCTAATTTTTCAAGAAATAAAGGCTATGTAGAACAAAAAAAGAATTTTAAATTTTAAAAAAAATTCTCTTATTCATAAAAATTCAAAAGGCTCTGTAAGATTATTCTCATCTTTAAAAGTAAAAACATTTTTCACTTTTAACTTCTACTTCATCACCCCATTAACTATTACATTTTAACATATAAAATTTTATTTAATAGAAATTTCTATTTTTTAATCATGGTAAC # Right flank : ACTATATTCAAAAAAAATCTTTTATTGCAATATTTTTTTAGAATGTTATTGTGTGATATTTTTATTTTTGAGATTTTTTATTTATTTCAAATAAAAGCATATTTAACTCCTCATTTTTTAGATATTATCCAATTACTATCTTTTTTCTAATCTAGAATTCTATATATTGTATCCTAGCATCTTTTATCTAATTTTTCAAGAAATAAAGGCTATATAGAACAAAAAAAGAATTTTAAATTTTATAAAAAATTCTCTTATTTATAAAAATTCAAAAGGCTCTGTGTGATTATTCTCATCTTTAGAAGTTAAAGTATTTTCACTTTTAACTTCAATTTCATCCCCTCATTAACTATTACAGTTTAACATATAAATCAAATTTTTTTATAGAAGTTTAGATTACTTAATTATGGCAACAATACCGTCTCCTTACGAAGTATCATTCATTCTTATTGTTATAGCTGGTACTTCTTGTTCAAGAGATAATGTTAATGCGTTTCCGT # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGTCTCCTTACGGAGTATCATTCATTCTTAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //