Array 1 26955-27958 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCZL01000058.1 Klebsiella pneumoniae subsp. ozaenae NBRC 105683, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 26955 28 100.0 33 ............................ TCGACTCAAGGCTATCGACAATAGAGACGAGCA 27016 28 100.0 33 ............................ CAACTTTGGTAAGCGCATCAACGCATCGCTAAG 27077 28 100.0 33 ............................ CCGAACGAATCACCTAACGCTGAAATAGGTGTT 27138 28 100.0 33 ............................ CACAGTGAAATACCACTTCGCAAAATCCACGCT 27199 28 100.0 33 ............................ CCCTGACAGCACCACGTCTTCCAGCTCGATGGT 27260 28 100.0 33 ............................ CGTTGAACTCTTGAACAAGACGTACATAACACC 27321 28 100.0 33 ............................ TAAACCAGCCGGTAGAAATGTCAGCCGGTAGCA 27382 28 100.0 33 ............................ CAGCGTGCTGAAATAAGCGTCCATCGCCTTACG 27443 28 100.0 33 ............................ CAAGATACAGGCTGAGAGGGACATGCAGTATCG 27504 28 100.0 33 ............................ TGACTAAGGCCACTCATTGAGAGCGACCTTAAG 27565 28 100.0 33 ............................ CTTCTACCGCCTGGCACAGAGCTATTCCATCAG 27626 28 100.0 33 ............................ CGGTATCGAGGACATTACCGAGGACTACGACGA 27687 28 100.0 33 ............................ TCTGAGGGAGACCATCAGCTTCAATTTCCGCTA 27748 28 100.0 33 ............................ TATGACCGTGCCAGCATTTTCGGCGTAGTGCAG 27809 28 100.0 33 ............................ TAAAGGAGCACCAGAACTGCACGGTACAAGCAT 27870 28 100.0 33 ............................ CGATGGTCTATGCGCACCTGTCGCCTGACTACC 27931 28 96.4 0 ...........................T | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.8 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAGTTGTTGTAAATCTGGTGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : CGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGAGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTCAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGGGTAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8453-9823 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCZL01000086.1 Klebsiella pneumoniae subsp. ozaenae NBRC 105683, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 8453 28 100.0 33 ............................ TAGTGCCTCCCGTCGCGACTACCGATACAAGTG 8514 28 100.0 33 ............................ TTGTTCGTTGGTGAGCATCGGTACACGTGCTAT 8575 28 100.0 33 ............................ CCATTTTCCCGGCGTACCCTTTCAGGTTCGGTA 8636 28 100.0 33 ............................ TACAGAAGTATCTGTAATCATCGAAACCAGAGA 8697 28 100.0 33 ............................ TCAACATGTACGTTTCCCGCGATGTTAATGCTG 8758 28 100.0 33 ............................ TGGTCTGACTGGTCTTTCGCCGCTGGCGTTCAG 8819 28 100.0 33 ............................ TACGTGGCCTCAGGGTGTTTCTGCGTGGGGCGC 8880 28 100.0 33 ............................ TGGTAAACCGGTCCCACCGGCAGAATGGCCTTT 8941 28 100.0 33 ............................ CAGGTGAGGGATAATATGTTGCACCATATCATT 9002 28 100.0 33 ............................ TACACAGAGTTACCATCAGAAGACCCACAGTTC 9063 28 100.0 33 ............................ CAAGGATAGTGGCATCGACAAGCATAAGCAGGA 9124 28 100.0 33 ............................ TTATCAGTGCGTATGCAGCTTCTTCAGGGGAAT 9185 28 100.0 33 ............................ TATACTTTAAGTTCATTGACTTACATTGAAATG 9246 28 100.0 33 ............................ CTTGCTGTAGTAGCCGAGTCGAGCCAGCGTTTC 9307 28 100.0 33 ............................ TACCAGCTCAGGGCGTCGCTCGCTGATGAGGTG 9368 28 100.0 33 ............................ TTGGTCAAGGACAGACAGCGACTCGTTTCGGTA 9429 28 100.0 33 ............................ TCCTTACGGTAGTGATACGCTTCAAAGCCGCCA 9490 28 100.0 34 ............................ CTATTCACTCTACACCACATTTTTTGACGGTACG 9552 28 100.0 33 ............................ TGCCGACTTGGGACGAGGACCCGGAAGAATGCA 9613 28 100.0 33 ............................ CACTGCGCGCATTGAGTCGCTGGAGTACACCAA 9674 28 100.0 33 ............................ TGGAATGCTGGTCTGGCGCAGGAGTCATGCGAG 9735 28 100.0 33 ............................ TCCGCCGTTTAATCGCGGTGATGATATCCGGCA 9796 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 23 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCACAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCGTCCCAGCCTTGCCAGATGTTGTCTCAGATTCAGGTTATGTCGCTCAATGCGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //