Array 1 58-573 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAZF01000031.1 Geobacter sp. OR-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 58 29 100.0 32 ............................. ACGATTACAAATGCCTCGTCATCTACGAGCAG 119 29 100.0 32 ............................. CGGTGCAGGAGTTGCCTTCGTTGTCGGTTCTT 180 29 100.0 32 ............................. TGTCGGCGGGCAGTCGATCAGGCAGATATCGT 241 29 96.6 32 ............................A CAGTTCGGCTCCGATGACCTGCGCTCTGGCCC 302 29 100.0 32 ............................. GTCATCGAACAGCTCAAACGCGACGGCGACAC 363 29 100.0 32 ............................. CCGCCGAACCTTGTACGCCTCGATGATCGGCT 424 29 100.0 32 ............................. AGAGCGCGAGCGAGCGCCAATATCTGAGGTTG 485 29 100.0 31 ............................. CAGTGTTGCTGCCAAGATGCTACCGCCCCCC 545 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.6 32 ATGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : CCCCGCAGGCGCGAGGATGAACCCGGTAAGGCCATGCAGGTCAATAGCATTGCCGCTA # Right flank : GCCCGTAGTCGCATGGTGTGGCTCCAATTATCTATGTATGAATCTGCGACTCGTATCCTCTCCGGCATCAATAAAACCTGTTCCCCTCAGCTCGATCCGAAAATAAACCGAATATAGTCAGGAGTTCGTTCATGTAGTATTATTACTTCATGGAATTCTTTGTCCTGATCATCTTGGCTGTATTGGTTAGCCTGATCATGTTCTGGCTGTTGGTAGTGCCGGCCGTTTTGCTGGCCGGAGCCTTCATGGCAATCGGCTTCGGGGTGATAAGCGGCATAATGGAGGCGTCGCGTCGCTTCTCCTAGCCATTTGTCCTATCCTCCTAGATCCCTCATGTAGCTCACCTTGACTTACTCATAACCCATTCCAATGCTGACCCCACACATTGCCTTTGCTTGAGCTGCGAGCTTACGTCCCACGATTTGTGAAGCAATCAATCCTCAATCCGATTGATCCGTCATTGTTCCGATCATGTATTGAGTCGAGTTCATACCTTGGTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 296-23 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAZF01000015.1 Geobacter sp. OR-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 295 29 96.6 32 ............................A TTGTCACAGTCGAGAAGTCAGACGGCTCGGAG 234 29 100.0 32 ............................. TAACTTATCCATTTCTGGTTTCCTTCCATGGC 173 29 100.0 32 ............................. CAACCCGGTGGCGCAACTTGCCAACGACCGGG 112 29 100.0 32 ............................. GGACGCTTCTCCCAGGACAAGAAAAAGATATC 51 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 ATGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : AATTACTTTGTATGTCACATATTATAATGGGGGAGAAGATAATGCTTATTCATCTCGTTTCAAGCGGCAATTCCAAAGTGCTGCGCATCCCGGCGGCTCTGCTGCGGCAGTACGATTTAACAGACGAAGTGGAACTTCTGCCGGGTAAGGATGAAATAGTTATTCGTCCGGTGGCGCGGAAGGCGCGGCGGGATTGGGACAAGGCGTTTGCCTCCATGCATGAACGTGGCGACGATGTCTTGTTGATCGATGATGCCTTGGGTGCGGAGGATTGAGAATGGAACTGAAATGATACCATGCCTATCTGGTCAACCTCGATTCCACTATCGGCCACGAAAACAGAAAAACACGACCCTGTCTGGTCATCTCCCCGGATGAGATGAACCGGCACTTGAGGACTGTCATTATTGACCCCATGAAAGGGTGGAAATAACCGTTCAAATTTCGGTGGCATGAAGCTCTTTGAAAATCGAATGAAATTTCGATGAGATAGAGGAAGT # Right flank : GATGTACAGCAGACACGCCAGCA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //