Array 1 24805-23226 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCGY010000008.1 Flavonifractor plautii strain SL.3.15 IHFPNLMO_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 24804 33 100.0 33 ................................. GCCTGTGGTGAGTATGGCTCTACCACCTTCCGG 24738 33 100.0 35 ................................. GTAATGACCTCCTGTGTCCCTGGGGCGACGGCTGC 24670 33 100.0 33 ................................. CGCGGCCACTATTAACCAGCTTCGCATGGCCTT 24604 33 100.0 35 ................................. ATTTTATAGCATATGGCCCCGAAAGTGGGGCTTAC 24536 33 100.0 35 ................................. TTTAAAGGAGGAAAAATAAAAATGAATCCTACCGA 24468 33 100.0 34 ................................. TAATGCTACGAAGAAAAATGCAAATGACGCTATG 24401 33 100.0 34 ................................. CCCGGTAAATATCCCAGTTTATGAGCATAGCGCA 24334 33 100.0 34 ................................. CTGTAGGTTATGAGGGAACACAGAGCAGAACAGC 24267 33 100.0 35 ................................. TTGAGGGTGAATTAGAGAAGCGTGACCCTAAGATT 24199 33 100.0 34 ................................. CATACCAACCGTGCCGTTACGCTTTGCAGACTTG 24132 33 100.0 35 ................................. TCGAAAAAAGCGTTGATGTCGGCTCCGCTGGCCGT 24064 33 100.0 34 ................................. TTGAGGGTGAGCTAGAAAAGCGTGATCCCAAGAT 23997 33 100.0 34 ................................. CTGAGCCTGCACTCCAATGCGTGCGGGACGGAGA 23930 33 100.0 34 ................................. TGATCGACGGTAGGGGTAAGGAAGCCGCTGCGAA 23863 33 100.0 33 ................................. GACTTGGAGCAGCCGGAGTTGATGGCTGAGATT 23797 33 100.0 33 ................................. AGCTGGCACAAAGTATGCCGCAGACCAGTCTGC 23731 33 100.0 34 ................................. GCCCTGTACCGCATGAACGGCCAGACCAAGGAGT 23664 33 100.0 33 ................................. TTTTCAACCTCTCTTTGCACCTCATTTCCAGTA 23598 33 100.0 34 ................................. ATAGGTCATGGTGGACTGGGCCAGCTTGGCCTTC 23531 33 100.0 33 ................................. CCCATGGCTGCAATAGTCATCCTCCTGTGGCTC 23465 33 100.0 34 ................................. CAGTGGTTGTGCTGCATCACCCGGTCGATGGGGA 23398 33 100.0 37 ................................. TGCACCTGAGTCACCAGAGACTGGAGGCCCGTGATGC 23328 33 97.0 38 ......................G.......... AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 23257 32 87.9 0 ............A...............-..CC | ========== ====== ====== ====== ================================= ====================================== ================== 24 33 99.4 34 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCACCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGTGCGATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTAGTAAAGTTTGCT # Right flank : CGTCTTACAGAGGCGCCTGAGCCGTTTACAGGAGCCACCGCATAGCGGCGCGGGTTGATTCAGATTTTTCACCCCGCGCCTCTATTGTTTGCGCTTCTTTTCGTTGACTGGTCTAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCGTATTATGTGGATTTCAACTGACTGGAAGGACTATGAACTGCTGGACTGCGGCGGCGGCGAGCGGCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGCTACAAGGGGCTGACTCTCAACATCAAGCCCATGAACTTCAAGCATACCGGCGTCTTTCCAGAGCAGGCAGCCAACTGGGACTTCGCCATGGAGCGCATCC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //