Array 1 47041-49642 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMB010000003.1 Intestinibacter bartlettii strain MSK.17.68 FGGNMBHG_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 47041 29 100.0 39 ............................. ACTTTTTCTTTTCTCTTGTCTTTTCCGTTCCAGCCCCAG 47109 29 100.0 36 ............................. AGATAATTTAGATACACTAACAAAAAGTGTTAATGA 47174 29 100.0 39 ............................. GGTCGAGTGTGGAATTTCCTAAGCAATACTTATAATAAA 47242 29 100.0 37 ............................. AAGAACAATAAAACACACGAAGAAGAAATATATTCGA 47308 29 100.0 37 ............................. TATTTCTTTTTTAGCTTTATTCTTTAAATCTTTATCT 47374 29 100.0 38 ............................. CTAAGTATCATATACATATATTATTAATAATTATACGC 47441 29 100.0 37 ............................. AGTATAACTTCTGGACTTACATATCCAGCTATCCATA 47507 29 100.0 36 ............................. TGTGGATAACTCTGTGGATAATATTGTGGATAGAAT 47572 29 100.0 37 ............................. ATGACATATGATGGGTTCATGACTAAAATAGGAAGAA 47638 29 100.0 36 ............................. CTAAGTTACTTGATGATATTTCAACTGTACCGCTAT 47703 29 100.0 37 ............................. TGATATGGTATACAATGATAAGAATGATGGAAGATGG 47769 29 100.0 37 ............................. TTTTATGACATCTTTAAAGACAAAATTTGCCATGCTT 47835 29 100.0 37 ............................. AAATAAGTCAATGAGAGCTGTTTACACCGATATAATT 47901 29 100.0 36 ............................. TACAAAGCCGGAAACACAACAGTCAATGGAATAACA 47966 29 100.0 38 ............................. TGCTTTAAGGCTTTCAAGCAAAAGGTCCTGTACTTCCC 48033 29 100.0 37 ............................. GGCTAATGTATTTTAGTACAAGCATTAAAATAAAAAG 48099 29 100.0 37 ............................. AAAACATCTATAAGATCTGTTTTTATATTTTCCCATG 48165 29 100.0 37 ............................. AATAATAGAACTTACACAAAGTATTAACGGGTTTAAA 48231 29 100.0 38 ............................. TTAGGAAGTAAAGTATTAGTAAAAGATACTGGAACAGA 48298 29 100.0 36 ............................. ATAAATAGAAAAAAATTCTTTAATGAGGTTAATAAA 48363 29 100.0 37 ............................. TTTAGAGCAATTAGTTAAATACTTTTCTACTGGAAGA 48429 29 100.0 36 ............................. CTATATGACTTAGTAATATTAGATAAAGAATCAAGT 48494 29 100.0 36 ............................. CTATATTAATAATATCGGAATACGAAAAAAAAATCA 48559 29 100.0 37 ............................. GTTAGAAGTCAGTTAAAAAATACAATACAAGGTAATG 48625 29 100.0 36 ............................. TTGGTGTATTGTAATGATTGTCAGAGTGCAATTAAT 48690 29 100.0 37 ............................. GGAGTAAAAACAAAAGATATAGATGCTGAATTTATAA 48756 29 100.0 37 ............................. GAAGATATACAAACAAAAATAAATACATATAGAGAAT 48822 29 100.0 35 ............................. CAATTAAAGTTATATACCCATTTATTGAACCACTC 48886 29 100.0 37 ............................. AGGAGTTTGATTGTACAATAGCAAATGTACATTACAT 48952 29 100.0 36 ............................. TGAAAGAGAACTTTAAAAAGATGAAAGAATTAATAT 49017 29 100.0 37 ............................. AATTTATATGCTTTCTTTTTAAGTAGATCATAATCAT 49083 29 100.0 37 ............................. TCTAATGTTACTGATTTTGAATGTAGTATGTATTTTT 49149 29 100.0 37 ............................. TTGTCGTTTTAGCTTCAGGTACACTAAAATCTTTATC 49215 29 100.0 37 ............................. GTCATGTTGATTGTCCCTGTCACTCTTACACACTATC 49281 29 100.0 39 ............................. CGCAATCTTTCATTTCAGCTTGTATTTCTTGTTCTATAG 49349 29 100.0 37 ............................. AAGGGAACTTCTTTAAAAATAACAGATATTAGCAGTG 49415 29 100.0 37 ............................. AACTTATTTAACGGGTATAGATTGGCAACAAGCTACA 49481 29 100.0 38 ............................. TATTATTGGTCTAACTAATTCTTTTAAAGCTACATTAA 49548 29 100.0 37 ............................. TTGTCAAAGAATCCTCCCATGTCTAGTTCGTAAATCT 49614 29 89.7 0 .......................TAA... | ========== ====== ====== ====== ============================= ======================================= ================== 40 29 99.7 37 GTTTTATATAAACTATGTGATATGTGAAT # Left flank : AGGGAAGGCATTAGTGTAAAATATGTAGATCCTGCCTATACTTCACAAACATGTAGTAAATGTGGTCATGTGGACAAAGAAAATAGAACCAGCCAAGAAAAATTTAAGTGTATTGAATGTGGATTTGAATTAAATGCTGATCATAATGCTGCGATTAATATAGCTAGAAGTAATAATTATGTAAAATAAAATAAAAAAATATGTAGTCGATTCAGCGACTAAAGGTTGAGGATATAGGATTAATAGCTAGGATAACCTAAAGCTATCTATAATCACTCGATAAGGGTTAACTCTAGATGTTGTGTTACCGTCTAGACATACATATAGTTTATTTATATAAATTGCAGTGGGCGATATTTGCATATTAATATAGTGGAGAGCTTGGAATAACTAGTCTTGAAGTGTTTTATAAAGTCATATAAAAAACACTACTGGAGGTTCACTGCAAAATTAGTTGATATATGACACTCAAATCATTGAAATTACTATATATTTAGTTG # Right flank : TTTTTTATTTATAATAACCAAGATAGGAGGAATATATATGAAAAAAATAAAACAAATTGTATCATTTATACTGATTTTTAGTATTACTTTCTCAACTATTTTCATGTTAGATACAAAAGATACATATGCAGCATCTATAAAATATGTTGATAATGCTAGAAGTGGAATAACTTATTCCTATGATTTAGACAAAGATGGTAAAAAGGAAAAAATACTTTGCTTAATAGGAAATGATGAATATGGTTATACACTAGATTTATACATAAATAATAAATTAAAAAAGACTTATTCAAATTTAGAAGCTATACCTTGCGTATCAATTTATGATATAAATAAAAAAGATAAATCATTAGATATTTATGTAGAATTGGTACACGAAAGTATGTACTGTGATTTTGAAATATTAAAATACAATAAAGGAACTATAAAATCGTATACTTTTGATGATAGAATAAGTAGTTTTGATAGCGATAAAGGAATAATGAAATTATCTCAAGTAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATAAACTATGTGATATGTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 38-962 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMB010000004.1 Intestinibacter bartlettii strain MSK.17.68 FGGNMBHG_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 38 37 100.0 37 ..................................... AATATTCTTTAATATTTATCCATTTATTTAATTGATA 112 37 100.0 36 ..................................... ATGTTAAACGATTCACCCTTGGGAGGTGTCACGCAC 185 37 100.0 37 ..................................... TATTGAATGCATATTCTTGCCATTCATATATTTTATT 259 37 100.0 36 ..................................... AGTAGTAGAAGCATGGAGAGGGTTTTAATCCTTGTT 332 37 100.0 37 ..................................... GTCAGCATGCCTTTACACTGCTCACACAATGCTATCC 406 37 100.0 38 ..................................... ACAAGGATTAATTGATATTTCAGATGAAGGTATAAGAA 481 37 100.0 37 ..................................... AGTTCAATAAAAGAAGAAATAGACATAACAAATTTTA 555 37 100.0 37 ..................................... CAATTAATTTAGAGGAAGAAATTGGAATTATAAAAGT 629 37 100.0 38 ..................................... ATAGCTTCTTTTTGCTTATCTGAGATATCTTCTAAAGG 704 37 100.0 36 ..................................... GGTGTAAATCCTTGCTCTTGGCTTGCATATACCTCA 777 37 100.0 38 ..................................... ACTTCTCCACTTAATATCTTACATTTATCAGTTACCTT 852 37 100.0 37 ..................................... CTATTTGAGTTGGAGTTAATAGTGTTTTTTTATCTTC 926 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 100.0 37 GTTTTAATCCTTGTTTTATTGGAACTTATTCTTTTAC # Left flank : ATAGATTAGCTGGTGCTCCGATTTCAAAAGTGGAAACG # Right flank : CTCGTAACACCTAAACACATTGAAATAACTAGTTTGTAGCGATTATATAATTTTTAAACTTATTAAAAACCATCTTGTTTTTAAATAAAATAAGTCAATTTTTTGTTATCAACACCAACTCCAAATCAAGTTATATCAATGGATACATAGATTAGGATTATATTTTTTAAATAATTTTACAATAACAAACAAAATTATTAATCAAAAAAACTTTTGAAAATTTTTATATCTAATTATAGAGTATCATACTATTTATAAAAAATACACAGATTTTTTATAAATAGATTTAGCTAAATCATATTTTAATAAAGTATGTATATATATCAATAAATTTGAAAATAATTCAGCTAAGTAAGAGTCAAGAGTCCTTATCGTAAGTATCTATATTTTCCTTTTTTAATAAATAACTCAACGTACTCTTGCCTGGATTTTACCTAGCTGTATATCTTTTATTAAAATTTTAACCTTTATTTGTATTACCTGCATTTTATTTCCCCCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCCTTGTTTTATTGGAACTTATTCTTTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [36.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 80978-78770 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMB010000005.1 Intestinibacter bartlettii strain MSK.17.68 FGGNMBHG_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 80977 29 100.0 35 ............................. TCACCATATTAAATGCCCATTTTTTACTGCTTTTC 80913 29 100.0 37 ............................. ATTTTACGCAGAAAAAAATAACTATGACATAAATAAA 80847 29 100.0 38 ............................. TTGATTGTTGAGTGTCCCAACCAGCTAATGCCATATAA 80780 29 100.0 40 ............................. GGTACTGATGTAGGCAGTGGTGAGACTGCATATTCAGCAG 80711 29 100.0 39 ............................. TATATATTGGGCATAATTTATAAGCTCTGCCAACTACAT 80643 29 100.0 36 ............................. TAAAATTAGCTTTAGCATTTCTAAATCATCCATCTA 80578 29 100.0 37 ............................. ATGAAATAGACACAAAAAAAACTACAAAAGCTAGTAA 80512 29 100.0 37 ............................. AAAGTGAAAAATTGCATTTTAAAAGAAATTGAAAAGA 80446 29 100.0 37 ............................. TCTGCTATAGCATTTCGAATAGCATCAGGAAGTGTTA 80380 29 100.0 37 ............................. TCTATATATCTAGATGATTTTACTCCTATTTCATCAA 80314 29 100.0 37 ............................. CTTGATGAACTACTTAAAAACGCTTCTGGATTTACTA 80248 29 100.0 36 ............................. ATATTAGAAGAAGGTAATAATAATATAACTTGGTCC 80183 29 100.0 37 ............................. GCATTAATTACATCAGCATTTAGGGAGCCTATAAGAG 80117 29 100.0 37 ............................. AAGCTTCTTAGAGATAACTTTGCAATATCAGTACTTA 80051 29 100.0 36 ............................. TGTATCTTTATATGTTTTGCATGTTTTTGCTTTTTC 79986 29 100.0 37 ............................. TTTTACAGTCTAACTCTTAGAACAGACCTTTACAGAA 79920 29 100.0 37 ............................. ACATCACTTCTTAATCTATCTATTTCAACGCCTTCTC 79854 29 100.0 37 ............................. TTAAATGGGCAAGTAACAGTATATGCAAAACATATTT 79788 29 100.0 37 ............................. AAGCAATACTTATAATAAAACAACTCAATGGGCATCA 79722 29 100.0 36 ............................. TCTTATAGTATAATAACTGTAAAGGGGGTGAAAAAG 79657 29 100.0 36 ............................. ATATTTTTACATCCAGTAGTAGAACAATACAAGAAA 79592 29 100.0 37 ............................. ACAGGTAACGGAGAAGGAACAGACATATTAAGTCTTA 79526 29 100.0 37 ............................. ATGAATGGTTTAACTGATGAAGAAATATTAGAAAAAA 79460 29 100.0 37 ............................. GTATTATTTTCTATTAGTCTTAACATAGTTGCTACAC 79394 29 100.0 37 ............................. ATAGTAACAAAATAAACAATAAACTTTCTAGCATGGA 79328 29 100.0 37 ............................. ACTTATTTGTCATGGTCCAAAACTGCTAATCTTACAA 79262 29 100.0 37 ............................. GCAGTAAAGAAAAACGAAGATAAGCTAGATAAAGAAT 79196 29 100.0 36 ............................. CATACTAAAAAACTACTTTTAGAATATGCAAATAAA 79131 29 100.0 37 ............................. TTATTAATAAAAAGTTGTAGAGGTAAAAAAATGACAA 79065 29 100.0 38 ............................. TTTACCATACTTATACATACAGATGGTACTGCTCAATC 78998 29 100.0 38 ............................. CTAAATCAAGACTTTATAGAAAATCCAATAGCATTTAA 78931 29 96.6 37 .......................A..... CTCATGCACATCATGTTTATAAAAATCGTGGGAATCA 78865 29 100.0 37 ............................. TTTGAAAATGATGAAAAAATATATAATTGTGATGAAA 78799 29 96.6 0 .......................C..... | T [78772] ========== ====== ====== ====== ============================= ======================================== ================== 34 29 99.8 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : AACATTTTATAGGTGATGAAAAATATAAAGTATTGAAAGCATGGTGGTAAAATGTTTGTTATTATTACATATGATATTGCAGAGGCTAAAATATTGAATAAAGTAAGGAAGACTTTAAAGAAATACTTAATTTGGACTCAAAATTCTGTATTTGAAGGAGAAATACTTCCAGGAAAATTACATAAATGTGTGAGTGAACTCGAAAATATTATAGATAATGAAGAGGATTCGATTTATATTTATGAGATAAAAAATAGTAAAAATATACAAAAAAATATATATGGAATTCATAAGAATTTTGATGATACATTTATATAAATTGCAGTGGGCGATTTTTTAATAAAAATACTTCCAAAGTATTGATATTACTTTGTTGGAGATCGGTTTATATAAAAACAAAAAAACACTACTTGACCTTCACTGCAAAATTCAATATATTGATATATTTTTTATTGCTATGATATAGTAATATCAAGGGATATAAAAAATTATTTTTTGGG # Right flank : CAATTTATAAAATAAATACTATATATTAAGGGGAAAGAAATATTATGACAAGAGTAGATATGTTTTATTTAATATTAGTTGTAATTATTGCTATAGCGTGCTTGTTTTGGAAATTGGGTCCTAACTTCTTTGTGAAAAGATTAAATAAAAAAAGTATTTATTGTGAGTATTATTTTATTTTCAACTATTTTAATTGTTGTTACATGTGCATTAAAAATAGAATTTAGAAAATCCTTATGGAGTTATTAGAAAATAAGAATTAAAAAATAAATAAGTTTTTCACAAATATTGTATTATAATATTTTTAGAACACAGTATATATGTGAATCAAAAACAAGGGGGATAACACAATGATACTAGATACTAATAAAATTGAAGAAAAAGCATTGGCAAATTTTAAAGGTGGAGAAAAGGCATTAAATGCAAGAATGCATGTAGACGAAAATAATAAAATAATCTTTGGAAGATTAGAACCAGGGGCATCAATAGGGGAACATACT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 94087-91399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMB010000005.1 Intestinibacter bartlettii strain MSK.17.68 FGGNMBHG_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 94086 29 72.4 6 ...A....A...A.C.AA..A..T..... AAAGGG C [94079] Deletion [94052] 94050 29 100.0 36 ............................. TATGTTTAAAGCACACCCTAAAAGTGCCATGATGCA 93985 29 100.0 36 ............................. ATATCTACTGCTACATCTTGTAAAAGTGAAAAGCAG 93920 29 100.0 37 ............................. TTACTTGGATTAAATGTATTAATAGCTTTTGCTAATC 93854 29 100.0 37 ............................. ATATTATTATTTTAGAATTATATATTGATTTTTGTTT 93788 29 100.0 37 ............................. ATCCATCTTCCTTATATTCTTCAGTTTGACTAAGTGG 93722 29 100.0 37 ............................. TAGAAAAAGACGATGTAAAAGTAAGTACATTCTTATT 93656 29 100.0 37 ............................. TCGTATATGTCATATAGTCTTAGTATATCGTTCATTT 93590 29 100.0 36 ............................. TCATTAATAAAAACAGAAAAGAAAAATGGATTTTAG 93525 29 100.0 36 ............................. TTAAACAAGAAATGAAAATTTTTGGCATCAAATTAG 93460 29 100.0 37 ............................. AGTTATAATGCAGATACTGAATATCTAGTAATAACAG 93394 29 100.0 37 ............................. AAGTTTGTATCTGACATTATTTACCCTCCTTTCTTTG 93328 29 100.0 37 ............................. GGAGAAAGAAGGAATAGAAGAAGTATTAGAAAAATTA 93262 29 100.0 37 ............................. ATTTTAGATACATCAGGAATAGCATTTGAAGTAGAAC 93196 29 100.0 36 ............................. TATTTTTCTACTATTTCTCTTGTCATTTTGTGAGCT 93131 29 100.0 37 ............................. GAGTAAATATAGCATAATCTTTTTTATAATCTTCTAA 93065 29 100.0 37 ............................. GTTAAAAGGCTAATCATTATAGATATTGAATCTCTTA 92999 29 100.0 36 ............................. AATTTCGATAAGTCTGTAGGATCTAAGAAAATATAT 92934 29 100.0 36 ............................. CCAAGACTTTCATTTTGTTTACAGAAGTTTCATTTA 92869 29 100.0 37 ............................. GGGGAAAAGATGGAGATTATACATAAAGTATATCAAA 92803 29 100.0 37 ............................. AGTTTTATATACATTTGATAATTTTAAAAAAGCATTA 92737 29 100.0 37 ............................. TATATAGAAAGTAAGGATTACACTTCTATATTGGCAG 92671 29 100.0 37 ............................. GGAGGAAGGGGAAGAATAATGAGAAGACATAAAGTCA 92605 29 100.0 36 ............................. GATCATAAAATTACAATACAGGGTTTATCTACTCAA 92540 29 100.0 37 ............................. CTATAAAAATAAACAACTTAAACTCAAAGAACTTCAT 92474 29 100.0 36 ............................. TATAGACAATAAAAATGTAAGAAGCAGAGATAAGGG 92409 29 100.0 36 ............................. TTTATTGGTGGGGTAAAAGGGGGATAACAAATGAAA 92344 29 100.0 36 ............................. TTCTTTGTATTTCGTTCTGTTTCGTCATATTATATA 92279 29 100.0 37 ............................. GATAAACTCATTGAATATTTAACTAAATCTTCATATG 92213 29 100.0 37 ............................. TATTACACTCTTGAAAGTCATTGTATTCTAATATATT 92147 29 100.0 38 ............................. TTAAAATTTTCCATTGCCCATAAAGCGAAGCTTAATGA 92080 29 100.0 37 ............................. TCATGGGGAGGCTACTGGTGTTGGAACGATGATAAGA 92014 29 100.0 36 ............................. GTAATATAAACTAATTCTAGCAACGAGGAATCTTCT 91949 29 100.0 36 ............................. ATAAAAACATGGAGGAAGGTTTTGATTTACTGAAAC 91884 29 100.0 36 ............................. TCTTTTTCTGGTACAAAGCAAAATCCACAATTTCTT 91819 29 100.0 37 ............................. GTGATCGACAAGACAGATATGAATGAAGTGTACATAA 91753 29 100.0 37 ............................. TTATATGGAAAATCTTCTTCATAAATAGAATATTTAT 91687 29 100.0 35 ............................. ATTTTTCCCCATAAATTTCCTAATTCAAGTTCTCT 91623 29 100.0 36 ............................. AAAAAAGAAAAGGAGGCGCGAGAAAATGCGCAAAAA 91558 29 96.6 36 ............................A CGTATAATTGGAGCCCACGCATCAACAAAACCAAAA 91493 29 93.1 37 ................A...........A TATTTTAGGTATAAGTGAAGATTTATTTTGGAATATA 91427 29 79.3 0 T...........GC.T........CG... | ========== ====== ====== ====== ============================= ====================================== ================== 42 29 98.6 36 GTTTTATATTAACTACGTGATATGTAAAT # Left flank : ATGCTAAAAATCATCTAAAATCTATTGAATTTGGATTTATGATTAGTAGTCTTACACCATACTGTTGTTGCAAGGATATGCTGACAAAATCTCAATATATCGTAGGTGGAATTATGCCAACTGTACTCTTAGGAATAGTTCCAGCAGTAATATCAATTTTCACAGGTTCATTATTTTGGTTTATTATGGGTGAATTAATGATTTTGGCAGGTGGTGGAGATTTGACGATTTTATTGAAATTATTGAGATATAAGAGTAAAAAAGAAGAGATCCTTTATATGGATCATCCGTATGAATGTGGATTGGTTGTATTTGAAAGGGAAAATAACAAAATTTAAAAATATTAATAGATTTGCAGTGAGCGATTTAAAAGAAGAACATATGTATAATTATTGGAAATACTGTGTTTGAAGGGTGTATTTTGGAATTAATAAAAAACACTACTTACACCTCACTGCAAAAATTATATTTATTAGGTAATTTGATTAGGCTATAATATT # Right flank : TGGGCACATGATAGAGGAAAGATAAGATATGCTGAAGATTTTATATTATCTATATGACATAGGTAAAAAATATAATTGATAAGAAATTAAATTATATTTTTTAACAACTATATTTTATCTATGCAAAATATTAAAAATTATTTACTATAGGAAGCTAGACTAAGTTTCAAATCTTCTATAATATCCATTTTAAGATTTTCAGGTTCTATAACCTTAACATTACTGCCCATACTTAAAATCCAACTTTTAATTTCATTATAGCCCCTCATATTAGCCTCGAAAAGGATGTAATCATCAAAATCGGTTATTTTTTGATTATCTACCCAAATTTTTTCTTTTATTATGTACCTAAAATCATTTCGTATTTCTAAAATAACTTTAATTTCATTACCCTTATAAATACCAATACAATTTTTTATATAATTTTCACTTGAAAAATTTTCATCTATGGAATAGTTTTCTTCTAAAGTATTATATTCTTCAATTCTACAAATTTTAAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTACGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [9-9] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 183672-179115 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMB010000007.1 Intestinibacter bartlettii strain MSK.17.68 FGGNMBHG_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 183671 37 100.0 37 ..................................... ACTGTTTCGTCCATACTTGTAGCTTTTTGCAACTCGA 183597 37 100.0 36 ..................................... AAAGCAGATGGTAGTTCAAATGTGTCTCTTGGGTGG 183524 37 100.0 37 ..................................... ATAACTCCAATGCATTTTCTATTTTTCTAATCTGTCT 183450 37 100.0 37 ..................................... AAAAATGTTATAAGTGCAATACAAAACTTGCCAAGTA 183376 37 100.0 38 ..................................... ATGATTGTTGTTTTTCAACATCATCAAATTCGCAATTT 183301 37 100.0 37 ..................................... TTATAACACATTAAAGGCTAGAGAATTCATTTCTCCA 183227 37 100.0 40 ..................................... TAGTTTCTACTACAGTATAAGCTCCACCAGCAGTAACTTT 183150 37 100.0 37 ..................................... CATATGGCAGAGCAATACAGAAAATTTAGATTTATCC 183076 37 100.0 36 ..................................... AAAATACATCTGCTAGAGTATCATCAATTCCTAAAA 183003 37 100.0 35 ..................................... TTTTCTGTTAAATTCATATTATCCCCCCTCCTTTT 182931 37 100.0 38 ..................................... TTAATATGACCACAATTAGAACAAGTTTTACTGCTTGG 182856 37 100.0 36 ..................................... ACTTATCTATATCGACTTCATTATTATTGGATTCAG 182783 37 100.0 37 ..................................... TTCTAAAATAACTGCTTTTTCTCGTAAATGTAAAATA 182709 37 100.0 37 ..................................... TTTTCCCAATCTGTAAAAGATAGTTCTAACTCTGTTA 182635 37 100.0 37 ..................................... GTTTCCACTTTTGAAATCGGAGCACCAGCTAATCTAT 182561 37 100.0 36 ..................................... AATATGTATCATACCTCATCCATTTAAGTTTTTCAT 182488 37 100.0 36 ..................................... GCAGTAGTAGGTATAACTGTTACTTTTCCTTTCCCA 182415 37 100.0 37 ..................................... TTGATAGTTTTATTGAAAATTTAACTGATAGATTTAC 182341 37 100.0 36 ..................................... TACTTACAAAATGATAATTCATCATAATTTATATCT 182268 37 100.0 37 ..................................... CATGAACAAAGCCTCCTTGCTTGTTGCAATACTTCTT 182194 37 100.0 37 ..................................... ATAAAAGATTCAGAAGATAAAAAGGATAAAAAAGATA 182120 37 100.0 38 ..................................... GCCCATTTTTTTTCAGATTCTTCTAATCTGTATTCTGG 182045 37 100.0 37 ..................................... TTATTTCTCTTATTTCTTCTGTATTGTTTCCTCCCCA 181971 37 100.0 38 ..................................... TTGTTAATTAGGAATATGTTCCGATTGAAGTTTTGAAA 181896 37 100.0 36 ..................................... AAAATATTGACAGCTTTTTATGCTGGATTTTTCTTA 181823 37 100.0 39 ..................................... TAGCTTCTTCTCTATATGTATACTCTTGTATTTCTTCAT 181747 37 100.0 36 ..................................... GCTAAAGCAAGAACAACAGAAGATAATACAAAGAAT 181674 37 100.0 37 ..................................... TTATTTTTTTTATGTAATATAAGCAAATTTTCTTTTC 181600 37 100.0 37 ..................................... ATACCTAATTTTGCATCATTAAAGTTGTTTTTATTTC 181526 37 100.0 40 ..................................... GAGCTATTATTCTTACCCCATTATCACATTTTGTACTTTC 181449 37 100.0 37 ..................................... GCTTTTCCAAGTAAACTATTTTCTTCTTGATCTATAC 181375 37 100.0 36 ..................................... AAAGAATTACATGTTGGAACTGTCTATACAGATTAT 181302 37 100.0 36 ..................................... TCTACTTCTGAAGATGCTGAATCCAATAATAATGAA 181229 37 100.0 38 ..................................... GTTATAACTCCCTCATATTGTTTTAAAGCTCCTATTCT 181154 37 100.0 39 ..................................... TGACAAAGGATGAAGTCTTAGAACATGCAAAAAGATTTT 181078 37 100.0 36 ..................................... GTTTTAGATATTTCTCTAACAGAAAAAAAGCACCAA 181005 37 100.0 39 ..................................... AAGATATTGCGAACCAACAACCAACTGATTTGTCATTAG 180929 37 100.0 37 ..................................... TAGATAAGACAGAAGAAAAAGACTATACACAGACAGA 180855 37 100.0 37 ..................................... AATTTCTTTGTTCTCTCATAAGTTTCTCCTATCTATG 180781 37 100.0 38 ..................................... TATCTAGTTAATTTTTCACATATGGATAAACAAAATTT 180706 37 100.0 36 ..................................... GAAAATTTACTTCATGTAAAAAAGTAGATCCTTCAA 180633 37 100.0 38 ..................................... TATCTAGTTAATTTTTCACATATGGATAAACAAAATTT 180558 37 100.0 36 ..................................... GAAAATTTACTTCATGTAAAAAAGTAGATCCTTCAA 180485 37 100.0 36 ..................................... ACTGATGTTGATGCAAGTAAAAAAGATAGTGAAGAA 180412 37 100.0 36 ..................................... AAAAGCTACATGCATTAAGACATTCTCATGTTTCTA 180339 37 100.0 38 ..................................... AAGAAGCTTACATAAAACAATTTAATGCTATGGAAAAA 180264 37 100.0 39 ..................................... GAGGTTTTGATATTGTATCTATCCTAAAAAGTTGTCCTT 180188 37 100.0 37 ..................................... TTTGTTCTTTGATATTAAATTTCATCTTATTACCTCC 180114 37 100.0 39 ..................................... TTATTAAAACATTACCTTCCTGGATGGAGAAATTTATGT 180038 37 100.0 36 ..................................... GACGATTTCCTAAAAGGCGAGCCTACAATAGCTGAT 179965 37 100.0 37 ..................................... CTACCTGTTTCTTGTGCTTTTGATAACATATTACTTC 179891 37 100.0 37 ..................................... TACTTATTTTTACTTTTTAAAAATTCATTTATTATTT 179817 37 100.0 38 ..................................... GCTCCAGATATTTTTCTTTTCCAATCTCCTGATGTTTT 179742 37 100.0 37 ..................................... TTTTTTTTGAAAAATAAATAAAATTATAATGTATAAT 179668 37 100.0 37 ..................................... AGTTTTTACAATATACAAAAGATTCTTCTTCTATTTC 179594 37 100.0 37 ..................................... ATAGGAGAACCTATGACTTCATATACTATAAATTATT 179520 37 100.0 37 ..................................... AGTGAATTAGGTAATATTATTTCTTTTAAATCATGAC 179446 37 100.0 36 ..................................... ACTATCAACATGCTCCTAAACGAGGCAAACATTGGG 179373 37 100.0 38 ..................................... TTTTGAAAAAGGAGATATGTGAAATGAAAGATGTTTTA 179298 37 100.0 37 ..................................... ATAACAATGCTGTTAGAGCAATCTATGGGGCTATGGT 179224 37 100.0 36 ..................................... TTACTTAATTTTTTATATTTCTTTCCTGTTTTATCA 179151 37 94.6 0 ...................................TA | ========== ====== ====== ====== ===================================== ======================================== ================== 62 37 99.9 37 GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Left flank : GTTAGCTTTAAATCAAAATAATATTAAAAAATATACAGCAGCAGATTTAATAGAAAAAGAAGAAATACTAAAAAGAGTACTTATAGGAAATATTTTGTCTTTTTCAAAAGGAATGGATTATACAGTTGACGAAACTATAAAAGTAAAGTTAGACTTAAATCAAATAGATGTTAAATTTAAACAAAAAGAAATGTTAGCTTTTATAGGAGAGTTTTTTATAAACTTTGAAATACCAGATAATTTTGCAATAGGTAAAGGAATATCGAGAGGATTTGGAACTGTAAAAAAGATATAAAAAAGATTTTTAATAGTTTTGTTCCTACAAAATTATTGGAAACTTTGAACTTTGACAATTGAATGTGTTGGAATTACTTGGTTTGAGATAGATGTTAATAAGCTAAAAAATGCATTTTTTTAATGGAAAATCATTGTTTTGAGGTTAGATGAAAATAAAGCAACACATTGAAAATCAGTAATTCCAATGGTTTTAGGTTCTACGT # Right flank : TCAAAAATGAAAAATATATTGATGTTTAAGAAGGAATTTGTCATATACTAGCAGAAATAATAAAATTAAGTAATATAAAAACTAAAGAAGGTGATATTAAGCTATGAAGCTAGTTGTTAATTCGGAAGGAGTATATTTGACTAAAGTAGGCGAATGTTTTTGTTTGAAAAAAGAGGGGCAGAAACAAGAAATTGCTGCTAAGAAGGTTGAACAAATAATTATAACGACATCTACAGCTTTGTCTACTGATGCTATTGAGTTAGCTGTTGAGAATAATATTGATATAGTGTTTTTAAAAAAGTATGGAAAACCTTTTGGAAGAGTATGGCATTCTAAAGTTGGTAGCATAAGTACTATTAGAAAAAGACAGTTAAATTTAGATTCTAATAAAATGGGTACAATTTTAGTAAAAGAGTTTTTGACTCAAAAGATGACTAATCAGGTTGAATTTTTAAATGAATTATCTATGAATAGAAGAGATAATAGAAAAATTGAAATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAGAGTAAGTTCCATTAAAACAAGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 190240-195819 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMB010000007.1 Intestinibacter bartlettii strain MSK.17.68 FGGNMBHG_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================== ================== 190240 35 86.5 9 A.......................-..-..A.A.... ATCGATTAA A [190271] Deletion [190284] 190285 37 94.6 56 ..................C.....T............ TTTAAAAAAGTGTAACACTTGTAATAACAAAAATCAATATATGATATATGATTTAA 190378 37 94.6 37 ........AT........................... TAAAAGATGAAAAGATTTATAATGAACAGTTTATTTT 190452 37 100.0 37 ..................................... TCAAGCTTTTAAGAACTTGATAGAAAAATAAGTAATA 190526 37 100.0 37 ..................................... ACAGCAAATACGGAATAAGGGATCAAGCAAGAGTAAT 190600 37 100.0 37 ..................................... AAGTTCCCTCTTTCAGTACATATTTCTATCCCTCTTT 190674 37 100.0 37 ..................................... TATTTTGAATATAACTGTCCGAAAGTTTATGTTGGAT 190748 37 100.0 36 ..................................... AGTTCTTGATTTATTTAATCCAAGAATAACTCCAAT 190821 37 100.0 37 ..................................... GTAAATCTATTTCAAATAATGCTTTTTCTTCGTTTAA 190895 37 100.0 37 ..................................... AAAGCAGACCAGAAGGGGTATTTATATTACCTTATAT 190969 37 100.0 37 ..................................... GTTTGCCTTATATTGTTTTAGCAGTGGTTTATACTCA 191043 37 100.0 37 ..................................... TAGTAGAATCTATGGATAATGCTAGTGGTAAAGTTGA 191117 37 100.0 37 ..................................... GTAACCTATTTGACTAGTATAATTGCTACAGTTTTTT 191191 37 100.0 37 ..................................... TAAACTCAGGCCTTGAAAAAAGTAAAACATCAACATC 191265 37 100.0 39 ..................................... CAAATCCTCCATCAGTTTGTCCAGATGTTTTACCATCAT 191341 37 100.0 37 ..................................... CTACTGGAGTTAATAGTTTAGTTGCTTCTGCATAAGT 191415 37 100.0 37 ..................................... AAGCATTTAAGGGCATGTCAGACGAACAAATAAAAGC 191489 37 100.0 37 ..................................... TCATATTATCAAATCCTTTCTGAAAATAAAAGATGCT 191563 37 100.0 37 ..................................... GAGAACTCATTTCTCCAAATACTTTACCAACACCACC 191637 37 100.0 37 ..................................... TCATATTCTCCATTATTATAATTTAATAATCTTTCTT 191711 37 100.0 36 ..................................... GATTTTTTCTTTTGAAAATTTACCATCAGGGATAGC 191784 37 100.0 37 ..................................... TTAAATACAGCTACAGAAACTATGACTTTCAGTAGTA 191858 37 100.0 36 ..................................... ACCTTTATTGCTTTTATATAAGAAATTAGGCATTCC 191931 37 100.0 38 ..................................... ATAAATCATCTAATCACTCCCTTCTTAATTTATTTGCA 192006 37 100.0 38 ..................................... TTAATTGCAGCAGAATTATTAGTGTATGGTGCAACTAA 192081 37 100.0 37 ..................................... TATATTCGAAAGTATAATAATTTTCATCATCTTCAGA 192155 37 100.0 39 ..................................... ACTACTCAACATAGTTCATATCTGCAATATATGTTTCCA 192231 37 100.0 35 ..................................... TTATTTATCTTTAAGTTATTAAGAAATTTTTCAAT 192303 37 100.0 38 ..................................... GAATTTTATTTATATAAAAAATAATAATTTATATAATA 192378 37 100.0 37 ..................................... AATAATAAAAAAGTTTTAGTCATAAATCCTCAAACCT 192452 37 100.0 37 ..................................... TGCTAGCTAATAAAACAAATACAGTAGGATTTAAGGG 192526 37 100.0 37 ..................................... CTTTTTGTATGAGCTTAGCAGTCTCATCATAAGTAAT 192600 37 100.0 36 ..................................... CTCAGCAGGTGCGACTGATTATTGGGACTCAAACGT 192673 37 100.0 36 ..................................... TACGTTTTAGAGAGTTTTCTATCTTGTCTCCATAAT 192746 37 100.0 36 ..................................... AAGGACTAGAATAATTCTAGCCCTTTTTTATTTTGA 192819 37 100.0 36 ..................................... TATAGGACTAGAAGTTGTTGCCTTTTGTCTTAAGTT 192892 37 100.0 38 ..................................... TTCTAACCATTTTAGATCTTCTTTAAGTTGAGTTTTAC 192967 37 100.0 35 ..................................... TCTTTTTGGCCTATTGCTGTATAAGGGGCTCTTCC 193039 37 100.0 37 ..................................... CTAATAAGGCAAATATAGATAATATTGATATAGCAAA 193113 37 100.0 38 ..................................... TCAGAACAAGGTACAATAGACGGCAATAAATATGTATA 193188 37 100.0 37 ..................................... CTCGACTTATATCATGCTTATAGACAAGCATATATAC 193262 37 100.0 38 ..................................... AGGTAAATTTGAAGATGGGACAGAGCTCATAGCTGAGC 193337 37 100.0 37 ..................................... CAAGATATTCTCTTATTTTAGAAATGTCTTCATCTGT 193411 37 100.0 37 ..................................... ACATTGATTTATATCCTTCCTTTTCCATTAACTCTTT 193485 37 100.0 38 ..................................... ACAGAAGAAATAAGAGAAATAATAAATTATTGTTTTTT 193560 37 100.0 37 ..................................... TGTGTAAAGAACGAAATGGAAAGAAATTTGACAAAGA 193634 37 100.0 36 ..................................... AAAGTTTGTAACTGGAATAGCATCTTCATCTATAAA 193707 37 100.0 37 ..................................... AAAACTAGGAAAGCTAGTAAAAAAGCTAATTCTAGAT 193781 37 100.0 39 ..................................... AGTGCAAGAGAAAAAACAAAAAGCTATTGATTTATTACA 193857 37 100.0 37 ..................................... TTGACTTTAACTAAGGAGGATTAGAAATGGAAGATAA 193931 37 100.0 38 ..................................... CAAAATAAAAAATATAATCAAATTTCCAATACTGTAAA 194006 37 100.0 38 ..................................... CTCCTCCATGTGATACAGGTTCGAATCCTGTGGCTTGC 194081 37 100.0 36 ..................................... ATTTTTAAACTCTGCTAATACGACTTTGTTTTCAAC 194154 37 100.0 36 ..................................... ACATCCATCTTCATTATCTAAACTATCTATTTCTAC 194227 37 100.0 37 ..................................... CAATTCTTTAAGATAGATAAAAATTGCTACAAATCGA 194301 37 100.0 38 ..................................... ATTGTTCAAAAATGTCCAAGTAAAAATAAAGTTGTATT 194376 37 100.0 38 ..................................... AGATAAGGTTAATTACGGTTGTATTGCATGGAAAGAAT 194451 37 100.0 37 ..................................... CAAACATAATGTTATTAAAAAGTGTTCATTTACTTTT 194525 37 100.0 38 ..................................... TATTCCTTCTCTTAATAGTTCTTATAGCTTAATATTAT 194600 37 100.0 37 ..................................... CTGATGAAACTCTAATAATTGAAGCAGGTATCAAATA 194674 37 100.0 36 ..................................... TACTTTTTTATTGATAGAGTAGTAGTTGTTATTCAT 194747 37 100.0 37 ..................................... GTTACGGAGAAATTAGATATTGGGAATTTGAAGAAAT 194821 37 100.0 37 ..................................... CCGAAACAGAAAAGATTAATTAATAGAAAAAATGATT 194895 37 100.0 36 ..................................... GAAATATAGAAATAGGAATGGTTATTTCTGATTTAT 194968 37 100.0 37 ..................................... CTTCTTCACTAAATAATTCTTTTTCTGATTTTTCCAC 195042 37 100.0 36 ..................................... GTTTTCAGATGCACTTACAGAATTAGCAGAACAAAA 195115 37 100.0 38 ..................................... CTTTGCGAAATGGTAGGTATTCCAGAAGAAGCAGAAGA 195190 37 100.0 36 ..................................... TCCAATAAGGTGGGATTACTGGCATTTTTTTTAGAT 195263 37 100.0 37 ..................................... TCGTTTACGTTCGTAATATCTACGTTTTGTTTTTCGC 195337 37 100.0 38 ..................................... TCTCCGAAAGGAAGGTGTCCAGAGATGGAAAATAAAAT 195412 37 100.0 36 ..................................... TATTCCTAATAAAAAAAGCCAGATTTCTCTGACTTT 195485 37 100.0 37 ..................................... GGATCAACAGAATCTCCATTTCCCCCACCACTAGGAT 195559 37 100.0 37 ..................................... CAGAGAGCAACTGGAAGAACTTGATGAAAGATACAAT 195633 37 100.0 38 ..................................... ATTGGCTATGAAAGAGGGTGATTCCAATGTGGACTTAA 195708 37 100.0 38 ..................................... TCCACCAGCGGTAACTTTACCTACCACACTGCTTGAAT 195783 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================================== ================== 76 37 99.7 37 GTTTTAATCCTTGTTTTATTGGAACTTATTCTTTTAC # Left flank : TTTGTGATTATAATAAAATACGATTGATTTGCATCTTTTTGAACTTCCTCGATTATATTTACCCAAACTTCATCTAGATAACTTTTGTCTATTTCCATAAACTCTAAAGAACTTGCTAATTTTTTTTCTTTTATCTTTGCTGCATCTTTATCTTTATATTTTTCTATTTTTATTCCTGCCCCAACATGTCCATTTCCTTGTTGATAAATTAATGCGTCTTTATAAACATCTTTGTAAAAACTTCTTAACTCCTTGGTGACTTTTCTTTCTCCTTCATCTATATTTATGAAGATCACATTATCCATCGGTTTCGTGTCTTTAGTCCATAATTCAACTAAATCCTTCTCACCATCTATAATTCTCACTTCATGACCTATATTTTTTATTTGCTCTATCAAATAATCACCTCCTGCAAAGGATATTAATAATTACATATATTAATAAAACCTTATATTTAGATAATAGTCCTATTGTTATTATATGTCAATAAATGTTTTTAA # Right flank : ATAGATTAGCTGGTGCTCCGATTTCAAAAGTGGAAACGTTTTAATCCTTGTTTTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCCTTGTTTTATTGGAACTTATTCTTTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //