Array 1 45463-45851 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWNF020000031.1 Escherichia sp. 93.0724 MOD1-EC7252_31_length_54600_cov_45.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 45463 28 100.0 32 ............................ TGTTGCTCACTCGTCATGCCGATGAGGGCGTC 45523 28 100.0 32 ............................ GGTGGGATGGCCAGCGCGAAACGCACGCAGAC 45583 28 100.0 32 ............................ TTTGATTTTTTCGAATAATTGAAGTATCCGTT 45643 28 100.0 32 ............................ GTCCGTGAGGTCGTCCGACGATAGTTTTTTCA 45703 28 100.0 32 ............................ GGTACGCCGTTGCTTGCCGCTGTGGTGAGACC 45763 28 100.0 32 ............................ CACATCAGCGTTATTCGCTGGCAATCGGGGTT 45823 28 92.9 0 ....................T...C... | C [45846] ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AATTCATTGTCGAGTTGCAGGTTCAACTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCACGTAACTGGCTGGCTGAGAAAGGTTACGACCGGGCAATGGGTGCACGTCCGATGGCTCGCGTCATCCAGGACAACCTGAAGAAACCGCTCGCTAACGAACTGCTGTTTGGCTCGCTGGTGGATGGCGGTCAGGTCACTGTTGCGCTGGATAAAGAGAAAAATGAGCTGACCTACGGGTTCCAGAGTGCACAAAAGCACAAAGCGGAAGCAGCGCATTAATCAGATTGTTAAGTAGGTTGGTGAAGTCCGTAATCTCGTCAGGGGTTACGGACTTTTTGTTTATGGGGTGGGGGAGGTTCAGACCCTTTTTTTGATGATGATGGTAAGTTGTTGATAATTAGTGCTGCTGGACGGTAAGGATAAAAAAGGGTGGCAGCAGGAAAATGAGATGGTTTTGCTTTATTAACAACGGGCTAAACGTGTAGTATTTGA # Right flank : ATACGATGATGGCAGAAATTTAGCTGCGTTATGGCGCTCTCAACTCCGAACCATTAGCTGTGACACACAATAACAATTGTGATAATTGCGACGAGAATCAATTTCTCACACAGAAATCAATGCTGTACTAATCCTAACTCCTTCAAATAAAAATAATCACAGGATGTGTTTATGTCTTCAAATTACCTTACTCCTTCTGATCTCAAAACCATTCTCCACTCCAGGCGTGCCAATATTTATTATCTGGAAAAATGCCGGGTGCAGGTGAATGGTGGGCGAGTGGAGTATGTCACCAGTGAAGGCAAGGAGTCGTATTACTGGAATATCCCCATTGCGAATACCACGGCGTTGATGTTGGGGATGGGAACGTCCGTTACCCAGGCGGCGATGCGTGAATTTGCCCATGCTGGAGTGATGGTTGGTTTTTGTGGTACGGATGGCACGCCGCTGTATTCGGCAAATGAAGTTGATGTTGATGTCTCCTGGCTCAGTCCGCAAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1223-2270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWNF020000059.1 Escherichia sp. 93.0724 MOD1-EC7252_59_length_24413_cov_45.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1223 28 100.0 32 ............................ AATCAGGTCGTCAATTTTTCGCGGCTGTGTAA 1283 28 100.0 32 ............................ GCTGGCTTTAGCGCGTGAACAGTACTGTTAAC 1343 28 100.0 32 ............................ GATCAGCATCCCGACAGCTTCCCCCATGGTCA 1403 28 100.0 32 ............................ TCAATCCTCCCCGCCTGCGCCGCGTTGTAGTT 1463 28 100.0 32 ............................ ACTGATGATAAGGGCGTCTGGTCACAACTCGT 1523 28 100.0 32 ............................ GATAACGGCATCAGTGTTCGTGCCTGGATTAA 1583 28 100.0 32 ............................ CAGCTCAGAGAAAACCGCTTTCAGCCTTGATA 1643 28 100.0 32 ............................ AGTAGAAGACACGCAGATCGGCTGGAAAAATG 1703 28 100.0 32 ............................ GGATTACCCTGGACAGCCAGGGATGTTAACAA 1763 28 100.0 32 ............................ CAGCAGTACAGCCTCTTCCATGCCGTCAGCGC 1823 28 100.0 32 ............................ GGCAGTGTGGCCACTTTTACGTTACGCGTAAT 1883 28 100.0 32 ............................ TCGGAAAGCTTGTCAGCGTTGCTCACGTAACT 1943 28 100.0 32 ............................ AAACCCCTCTGTCGTTACTTTGCATTCAGCCG 2003 28 100.0 32 ............................ ACAGCAAACGGCGGGTGTATCGACTCGACGGG 2063 28 100.0 32 ............................ AACTGCGGCCTTTGAGTCGGTCCCCATCGCAT 2123 28 100.0 32 ............................ ACGATGCTGAATAAAATCACTGATATCATGAA 2183 28 100.0 32 ............................ GTAGTGATAAACTCCGGCGCACCAGACGACTG 2243 28 89.3 0 ....................T..TT... | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGTGTTTTTTATTCATGGCGGATCAATGCAAAAAAAAAGCCCGTACTTTCGCACGAGCTCTTCTTTAAAGATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTTTTGCTGCCTTACTACATGGGGGGCAACGGGGCGCTACTATAGGGAGTTGGAGCAAAACGGTCAAGAAGAATTTATTTAGATTGATTTGTTTGGTTACGCAATGAACACACGATTCATTCGCCCGAGATTATGGCCGTATGCGTTCTGGTCAATTGTTTATCAAAAGCTACGAGGGAAATATGAGAGTGAAGAAATACCAATCGACCCATTTTTTTAGAGTGACATGTAACTCATTGATTTTGTTTATTACTATTTTGACATCTCGAAAAAGGGTATGAACCTATGATTTTGTGATTTTTAACAGTAAATCAATCGGATAGTCTGCTATTATTTCA # Right flank : AATCCATACCCCAATATTTATTTTCTTCCTTAATCCCGGGCGCAAAAAAGGCCGGTTAAACCGACCTTTTACTCGTTCTTTCTCTTCGCCCGTCAGGCGGCAAAACAATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAGGATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGTGCAGTAACCACGTGACCGTTTTCTAACTCTACGCGGAACATGGTGTTAGGTAACGTTTCAAGAACAGTACCTTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCGTAATTTGAACCGGCAAGATAATGCCGAAGTTCTGTAAATAAGTAAAGATTTGCGCGCTAAATCGCAACAAACAGGTTTGGCACATAACTCCGAAAACACACGGCTAAGCCGCACCAAAAGCGCAACGTATAAGGGAACGGTGAGATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //