Array 1 182456-179806 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFPR01000007.1 Klebsiella pneumoniae strain 4300STDY7045917, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182455 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182394 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182333 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182272 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182210 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182149 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182088 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182027 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181966 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181905 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181844 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181783 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181722 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181661 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181600 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181539 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181478 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181417 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181356 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181295 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181234 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181173 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181112 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181051 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180990 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180929 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180868 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180807 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180746 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180685 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180624 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180563 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180502 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180441 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180380 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180319 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180258 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180197 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180136 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180075 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180014 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179953 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179892 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179834 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //