Array 1 1507-792 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTM01000002.1 Paenibacillus peoriae strain FSL H8-0551 NODE_2_length_491804_cov_1.45922_ID_4602, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1506 33 100.0 37 ................................. TTATTGTTGGCGAGAGCATCGAGTTTTTTGTCACTCA 1436 33 100.0 35 ................................. CCCTTAAAATACCTTGAACCTTGTATTTCATCTGA 1368 33 100.0 37 ................................. CCCTACTACAGCACCGTAACGCTTGTTACGGGTCAGC 1298 33 100.0 37 ................................. CGGCCTTAACCCCGAACAACATATGTCCAGGTGCCAC 1228 33 100.0 33 ................................. ATTAATTACAGCCACTAGCCGCGCACGTTTATG 1162 33 100.0 34 ................................. AACCTGATATCATTAATAATCTACTCAAATCAGA 1095 33 100.0 34 ................................. AACTAAATGATTCAGATCTGCCATTGTTCCACTG 1028 33 100.0 36 ................................. TATCTTGGTCTTGGCAATGCCAGCATCTATAAGGAT 959 33 100.0 35 ................................. ACATCCACACCGATGATAGGGCCTTGGAGCTTGAG 891 33 100.0 35 ................................. TCTTGATCTGGTTCGGGGTAGCTTGGGGAGTCATT 823 32 93.9 0 ..........A....-................. | ========== ====== ====== ====== ================================= ===================================== ================== 11 33 99.4 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TCCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAACATATAGGGGCAAAGGAAGCTTATGATATGGAAAGCCCACTGATTTTGTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGATCCTTCGCACCGCGAAATTTGTCGAAAAGCATTAGAATGCTGTCTATGAGAAAAAGTCAATAGTTGATACAAGCCTTTTTGGCATCAGTTTTTGCGACAATGTGTGGAATTGATATCATTAGGGTATGAATTACTGCATTTTCGCT # Right flank : TTCACAAGTACCGCTCCCATCGAAATGAATAGAAGACACGTTGCGGAATTGAATCGCACAAGGGTTCTGACCAGGCTGTTATTGTTTCCGTTGATTGACTGGTTCCTTGCCGTCTGCACGTGCCATAAAGCCCCGGAATAACTCGGGAAGTGCCTCTGGATATTGCTGAATTACAGGAGCTCTGCTGCGATCTGTTTGAGCACTGGCGGTGTTGGGATGAGTTGGCCGTCACCTTTGTTGCCCTTGATGTAGGCTTTATCCTCGTAGGCATAATATACATCGCCTTGGCCCTCAACGACCGGGTAGCCGCTCTCATCATCAGTTAAAGATGTTAGCACGTGATTGCCATGTTGTGCGGCGTGCTCCTCATCATGCAAGCGCAGGATGCCGTCCTTACTTAAAAATGCGAAACGTGGTTGTGTAGTAGACACAATCATGTCCTCCTGAAATGATTTTTTTGAGAAATCAAAAAGGCCGACACATTGGCCGACCTGATTCAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 11394-10622 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTM01000002.1 Paenibacillus peoriae strain FSL H8-0551 NODE_2_length_491804_cov_1.45922_ID_4602, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 11393 32 100.0 34 ................................ CAGTAATACATATTCCAACCTAGAAAATACGCTT 11327 32 100.0 34 ................................ ACTTGCCATCCTTCTAACGCAAATTCATTTTGTG 11261 32 100.0 36 ................................ CTCTTTAGGGTCTGGATATTTCTGACCTGAATAGAC 11193 32 100.0 34 ................................ ATCTGCTGGAGCAATGCATTGTTGGTTTCCATAA 11127 32 100.0 34 ................................ AACCTCGTAACCCCGCCGCCGTAGCGCATTGACA 11061 32 100.0 37 ................................ ATTTCCAACTGCACCAGCAATACCGTTTATGGATATG 10992 32 100.0 36 ................................ TCTTCGGCTTTGGTTGATAGTCCGTTCATGTTCCCC 10924 32 100.0 35 ................................ TTCTCTATCCCAGAATTTATATTTAAGCTCTCTCA 10857 32 100.0 36 ................................ CGCAGCGCGTAATATAGAAACATTCCTGCAGCAAGT 10789 32 96.9 39 ............................C... CCTCGTGCGGCCTGTAAAAACCGATATAACGAGGGTCAA 10718 32 96.9 33 ........T....................... TCTGACAAATGTTAATTAAGCAATGCCTCACAT 10653 32 84.4 0 ....T........C....AT..........G. | ========== ====== ====== ====== ================================ ======================================= ================== 12 32 98.2 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AGTTCCGTATTCGTGTGAATGTCATCTATCCGGGTGCCATTTCGACGAATATTGATGAAACCACGGAGAAATCGGAAGGGTTAAAGCAAATTACCATCCCCGTCAAGTTTCCCGAAGGAGGGCAACCGTTGGCTGATGGGCCGGGTCAACCCGAGCAGGTAGCTGATTTGGTGACATTTTTGGCTTCTGATCATTCGCGTCACATTACTGGTGCACAAATTGTAATTGATGGGGCAGAGTCGTTATTGTTTTAGAAAATAGAGCATGCTCTGGGACAGAGAAATGTTTTGTGGTATCCTGAGTGTATTGTCTTGGTTACGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAATGGATTCGGATTAGCTTTCTTCGTTAGAAGTCAATAGTCGATTCAAGCTTTTTTGGCATCGTTTTTTTCGAAAATGCATGGAATTGATATCATTAGGGTATGAATTCCTTCATTTTCGCT # Right flank : ATCTATAGTGTTCGTAACCTTGCATAACAACTCTCAGCAGACTTTACATGATTGGAGCCAATATAATTTGTGTTATGAACTTTAAGATTATTAGTTTAGTTCTCTCTAAAAATACTATTTCCACATGATTTAAAATAATATTTGTTTACATAACGAGAATAGATCTAATATGATTAGTAAGTAGAAGAGAATCTAGTATTTTAAGCGGAATATAAGTCTCCTTCAATAACCACCTAAAAGTCATAAAATGAATATAGAGCTGTGGATGTGAAACCGTAATCCTTGAATTAAGTAGATAAGAGAGGAAAGGAAGAGAAATTACAACACTAGGACAATTATATTAGCACTATCTATGAATTCACTTAACAACGGGAAATGTCCAAGTGTGGATTCTAGATGCTGTCGCTATTTACCTTAAGGCACGATTATACAGTTTAAGTATTTGCTCATAGGAGGAAAATAGATGAATTTATTATTCATTCCTGGTTTATATTTTTATA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 4667-5358 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTM01000014.1 Paenibacillus peoriae strain FSL H8-0551 NODE_14_length_192149_cov_1.24183_ID_4632, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 4667 32 100.0 34 ................................ ACCTATCTGCATTATGTCAAAAAACTTATATACA 4733 32 100.0 35 ................................ TGTGACCGTTGGCGGTCTGTTTTTGTTGGCTGACC 4800 32 100.0 34 ................................ TTTTCGCTTACCAGTCAGGTTGCTGGCTCCCGGA 4866 32 100.0 35 ................................ TTTTTTAACGCTTTGGTATCGTTGGATGCCGACCA 4933 32 100.0 35 ................................ TGTACTGTAATCTAACTTCAAGATGACCATCCCGA 5000 32 100.0 35 ................................ TCCTTGCCTGGTGAGAAATAATCGGTAATGGCAAA 5067 32 100.0 37 ................................ TTTGTGCTCGGCCTGTAAAGGAGTATCCTGCACCAAC 5136 32 100.0 33 ................................ TCAATCGGGGCCATTACCTCCACGATCTTTACA 5201 31 96.9 28 ..............-................. CTATCTCGGTTCGCTGCACTTGTAGCTG 5260 32 75.0 34 A.G.TTT..C..G.........A......... ACTCACCTTTACCGCCTCCTTGGGGCTGTAGCAG G [5267] 5327 32 78.1 0 T........C..G.............G.T.TG | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 95.5 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AATGCAGCCGGTATGATGAACAGGGTTAATAACTCAACTTTTGCCGAACGTTTTCATAAAATATTTTACAAATACCTTTATGATTTTCGAAAATATAAAGGTATTTTTCTGATCAATGTAGTCGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGTGTTAACTGGTGGGACCCTGCTTTTAAATGCGCTATCGATGAATTAAATATATTCGAATGTGCGCTTACTCCTTCACAGGTGGCAGAACTGGCAGAGGTGAAATAAGTCCAGGCAGGTATTTGTTGCTAAGCCAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGCACCTCAGATTTTGTCGAATTATATCGAATGTGAACAAGTTTTAAACGATAGCAAGAGGATGAGGTAATATTAGATGCGTTTTTGCCAAAATAACGCTAGAATGTTACTTAAATAGGGGGCATTTTACCCATTTTCGCT # Right flank : GAAAAAGAAGGCTTGTTTCGTGGCCTGCCCAGCAGTGAATAGGTGCAAATTTCTTCTTAACGGATTTCTTATTCGACAAATTCCCCCTTACTTTTATGCAACAATTAACTAACATTTACAATGGTTGAAGTATAAATTAAGGTGGGAGTTGCTGCTTATGAGAATTTCCATGAGTAAGTTTTTAAAGCGCTATGCAGCTATTTTGTTGGGCTACGCAATATGTATAGGGTTATTTTACGCTTTGGGATATAAGATGAGCGCTATGGGAATCTATGCAATTTTGACAGGAATTGTGACTGGAGAAATAATCAACTTCGTAATATCAAAGCGAGAGAAATGAACCTAGGTATCCCCTGATTGCATCAACATCAGGGGATTTTTCATTTAGTTAAAAGGTCCAAAAGAGTTTCTGCATGGGACCTCTTTATCATTTACTGGTGAGAATGCACATAGGGAAATGAATTAGTCATGTCAACATTGTGAAACCTTTTATTTGGAAC # Questionable array : NO Score: 9.04 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 27470-26228 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTM01000003.1 Paenibacillus peoriae strain FSL H8-0551 NODE_3_length_481640_cov_1.65732_ID_4604, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 27469 32 100.0 38 ................................ AGGATCAGTAGGAACCTGTGTATCTTTGCTGCCTTTAG 27399 32 100.0 33 ................................ CCCTCTATACCAAAAATCCGGTACACGAGATTA 27334 32 100.0 36 ................................ TGCTGGAACCCGCCTTGGACTTAGCCGTTTTGTTGC 27266 32 100.0 35 ................................ TTCACTACATTGCAACTCGCGTATGTCCCTCAATA 27199 32 100.0 34 ................................ ATATTATTAATCTCCTATTATATTATTAATTGAT 27133 32 100.0 36 ................................ TTGCGTAGGCTGCGGCTTGTCCGGTAGAACAACGGC 27065 32 100.0 34 ................................ TAAACATGCTGGTCCGGTCCTGAACGGAATGTAC 26999 32 100.0 34 ................................ TCAAGACTATCTGCTGGAGCAACATGCAGCAGCT 26933 32 100.0 37 ................................ ACTATCTCCTTTAAATTCACATCTGCGAAGTTTGCAA 26864 32 100.0 35 ................................ TTTACCGTTACGGTCTTTTAGTCCGGTATATTGAC 26797 32 96.9 35 ........T....................... ATCAAGATACTGGTCCCAAGTAATAGCTTCGTATC 26730 32 90.6 36 ........T........AT............. TGAAGGTATTGAATCAAATCAGTTGCCTCTTCCAAG 26662 32 93.8 33 ........T.......A............... AAACGTTACAGCTTCTAAGAATTTGAAATCGGT 26597 32 96.9 36 ...................T............ ATTTTGTTTACAGGTTTGTTAGTTTTCATCATGATA C [26588] 26528 32 96.9 33 ............G................... TCTTTCTGAGGTTACGCAGGTTAGCAGCTTCTA GGT [26502] 26460 32 100.0 35 ................................ ATTTGGATATCGAATCCAAACTCAGGATTGTTTAG 26393 31 90.6 36 ........T...G..-................ TTTTAAAGTTGGTGTATTACTCACCTTTACCGCCTC 26326 32 93.8 34 ..T.........G................... CTGAGCGTATTGTATTGGTGGTTACTCACCTAAA 26260 32 87.5 0 ..T................G.G.....A.... | C [26238] ========== ====== ====== ====== ================================ ====================================== ================== 19 32 97.2 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CGCTGAAATCAAACGGAGATAAAGCATATCTACGCATGAAAAGAGAAGTCATGTCGCTGGACGAACTGGAACATGCGTACATAGCCAACGAACAAGACTATCAAGATCGCAAAGCGTTTTTCAGGAAAACAATCTATTCCCCCTTTCTGTGCATGTTTATGGGTAATTCGATGTGCTTTATAGTCAAAAAAGAACTATATATAAGTTTATTATATCGTATAAATAAGAGAGTTGTAGTTTTTTTTGTGGTAAAATAGTATCTAATTTAAGTTGATTGACCTGCTCTTCAAAAATTGAGTGACCATAGGAAAGATGATTCGGTGCGAACCCCAAGCGCACATAAAAATCCCGGGTCCTTCGCACCTCGAAAATTGTCGAAAAGTATCGAATTGGCTATCTATCCGCAAAAGTCAATAGCTGATCCAAGCTTATTGGGCATCAGTTTTTGCGACAATGCGTGGAAATGATATCCTATGGATATGAATTACTGCATTTTCGCT # Right flank : CGCGAGCAATTGAAGACTTTACGACTACGAGACTGGCTCCCTTTTAAATTAGGGGAGCTTTTTTCTTCCATTAAAACCAGGATTGCTTTATGATAGAACAGGACATCCTAGAATTTTCCTGTATATATTTAGGGAATAGCTGAATTTCTTTAACACATTTGAGAGGAGATTTCAGTATGAAAAGGTTTAAAAAGGTGGTTTCAGTTACACTAAGCTCAATGCTCCTGCTTTCATTCGGTATGACGGCGAACGCGAGTGCAAGCCCAGAGGTGAAGACGGATCAAACGATTCAAACAGTTTCCAATGTGCAGCTAACAACTGATAAGGAAAGTGTTATTGAACAATTAACACGCGCGGACAAGCCTGCCAGTATCACAGATTCGGTGTACACCATTACAGAAAATATTAACTTGGCGACACCACAGAAATCTGTATTGAAAAAGAGAGTTACCCCTTCGCTCAAAGCCAGTGCAAACTCAGTATCATCTAAAGCCGCAGCG # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 30475-30041 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRTM01000003.1 Paenibacillus peoriae strain FSL H8-0551 NODE_3_length_481640_cov_1.65732_ID_4604, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 30474 32 100.0 36 ................................ AACCTGCATGTCGGTACTTACCCGGATGTATATTGC 30406 32 100.0 35 ................................ AATTTCGCCATTTAATCGGTCTCCTTTAAGGGCTC 30339 32 100.0 35 ................................ AGCGAATTCCCCGTGTGTTGTAGGAGCAGTATACA 30272 32 96.9 33 ..............G................. TTACCGAATGGTTGAAGAAGGAGGTCAAATAAT 30207 32 93.8 35 ........T.....G................. AGCGCTTGCTTACGTTGCCATTGGTTTTTTAATAC 30140 32 87.5 35 ....T.........G....TC........... TCTTTTCCTGTCTGCTTACTAATGATTCTGATATT 30073 32 75.0 0 ..T...T...G...T.A..T...A...T.... | A [30047] ========== ====== ====== ====== ================================ ==================================== ================== 7 32 93.3 35 GTCGCTCCCTATATAGGAGCGTGGATTGAAAC # Left flank : TCATCCTGAGGGTGAGCGACTTAAGGTGAGGCTGTCATCTCGTTTGCAGGATCTTGCTTCGTGGAGTGACGCTTTAAATCATAAAGAAAACATCAACTACAATGACATAAAAGCAAAATTCAAGGCGGAAAAATCATCTTCTGAGTTGCAGACAGCTTTACAAATGGATAGCTACCGTGTGTATGAGGATCAAGGAAAGCAACAAGAAATTGCGTTGCTTTCTCTTACCTTTCAATTGAATCAATTGTTGATGCTCATTAACAATCCCATTTTATTTCCACATATGGCCTATGTAAATATGTTTAACAATAACGGTAAATAGAGGTTAATTAGTGCGAACCCCAAGTGCACATGAAATCCCCGGAACATTCGCACCCCGTGCCAGATAAGGGATTTCGTCATTTTAGGGTGTGCTTTTTAACAATTATTGGTGAGTTGAAAAGAGATTCGCGAAAAAGCGTTTACAAAGTCTTGCTGGATAAGGCTTTGTAACGCGTGCT # Right flank : TCAGCTCGCTATACCCGCATCCGTAAGTTCGTTGCTTCTCACAGGGTGATGTACAGTAAAATAATTTAGATCTTTAATTTGGTGCGAACCCCAAGCGCACATGAAATTCCCGGAACATTCGCACCTCGCGTCAGACAAGGGATTCAATGATTTTGGAGTAAGATTTTTAACATTTATTGGTGAGTTGAAAAGAGATTCGCGAAAAAGCGTTTACAAAATCTTGCTTGATAAGGCTTTGTAACGCGTGCTGTCGCTCCTTATGTAGGAGCGTGGATTGAAATTGATTTAGCATGAATATTTTCTGTTGTGAATTATCGTCGCTCCTTATGTAGGAGCGTGAATTGAAAGTATGTATTTTTCATACCACACATATAGCCTATGACGTTCCTCATTTTTCATTGAAACAAAAAGGTTTGCCCTAGTACTAGGCAAGCCTTCTTGTGCTGGTTGTAAAACGGAAATAGGTTCATAATGAACTAACATTTTTACAGACGCGGAAC # Questionable array : NO Score: 8.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATATAGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.80,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //