Array 1 48-2120 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLP010000042.1 Fusobacterium periodonticum isolate Fusobacterium_periodonticum_BgEED13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 48 30 100.0 35 .............................. GCAAACTCTTCTATGAAGCGTTTAGCCCCATTTTT 113 30 100.0 36 .............................. TGCAATTTTACCTGCTGGAACTCAAATCCTAAGTCA 179 30 100.0 36 .............................. TCTTTCAAATGTTCTAAAAAATAATGTCCTAATTCG 245 30 100.0 36 .............................. TGGAATAAGGAATACAGAACCAGCTTTAGAAATGTT 311 30 100.0 37 .............................. ATGTTTTTCCTAACCTATTGTTTGGAAAAGTATCAGC 378 30 100.0 36 .............................. ATATTTCCATCTTCCTTTATTGTAAGGCTTGACCCT 444 30 100.0 36 .............................. TTGATAAGTAACATTTGTTTCTTTAGAACTATTCTC 510 30 100.0 37 .............................. CTTTTGCAATGTAATGCTTACTTGTAACTCCACTGCT 577 30 100.0 37 .............................. TTTTTTGAGACAATATCATAATCTTTTAACTGAATAA 644 30 100.0 37 .............................. GCTCCAGCTTGTTTTTTTTCTTGCAATGCTTTTAGAG 711 30 100.0 36 .............................. CATTTACTCTTACAGATTCCATATCCTCCTCGTACT 777 30 100.0 34 .............................. GAACCTGCTGGAGAGAACTATACTCGTGGTGCAG 841 30 100.0 35 .............................. AATTTAAACTACCAGTAAAATATTGATTCTCAACT 906 30 100.0 36 .............................. AGGTTAAAGTTGAGAACAGAAAAGTCAATGAAGTAG 972 30 100.0 35 .............................. GACATTACATTAGGTGATCCTGTTCAAATAATCAA 1037 30 100.0 35 .............................. GGTACATTAGATGAAATAATAATAAAGCTTAACAA 1102 30 100.0 37 .............................. GACTCATAGCAATTTTGTCTCCAGCCATGGCTATAAC 1169 30 100.0 36 .............................. TTTTTTATCGATTAAAGATTCGTCATAAATTTCTGT 1235 30 100.0 36 .............................. TTATTGATTAAATTTATTGCTGTCTTTCTTAAAGTG 1301 30 100.0 35 .............................. GAAATGTACAGAAATACAATGAAAGAGATAGTCAA 1366 30 100.0 36 .............................. GTATACATCGCCTCTTAATATTACTCTGTTTAAACG 1432 30 100.0 37 .............................. CTGAACTTCATAAGGGAGAAAGAGTCCTAACAAAAGA 1499 30 100.0 37 .............................. TGAATGTAATTATGTAGGTTGCATAAAATTTAATGAA 1566 30 100.0 35 .............................. ACTCCTCCAGAAAATATATAACCTTTGTTGCTTGT 1631 30 100.0 35 .............................. AAGAACCCAACTGAACACCAGCATTTTTTTTGCGA 1696 30 100.0 35 .............................. GTAGAAAGAGAACAAAATTTGAAAAAGACTTTAAA 1761 30 100.0 37 .............................. GAACTCATGGACAATTTCTTTGTAAATACTTTAAAGA 1828 30 100.0 36 .............................. ATTGGATACATTTATGAATGCATACGGAGTAAGAGT 1894 30 100.0 35 .............................. TATAAGAATGCATGGCCATTCGATATGGTGGTACT 1959 30 100.0 36 .............................. CAAATCCCTTTATTTTTTCTTTATTTTTATAAGCTA 2025 30 100.0 36 .............................. TTTGCAAGATAGAAGTAGGCAGACAATGTTCCAGCT 2091 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 100.0 36 ATTTCAAAACATTTCATGTTTACGGTTAAT # Left flank : TTACGGTTAATTGGAATAAGGAATACAGAACCAGCTTTAGAAATGTTA # Right flank : TAAGTATTTTTTCAAGCTTCATAGGATTATGATACCTTATTTTTTCTAATATTTCAACTATTTTTTTAATTTTTCCCAAGTGACTCCATTTATTATTTAAAATTTCTCAAATACTCATATTTTAACTAACTTTAATAATTTTTAAAAATATTGCTTGGGAATTTTATTTTTATAGAAATAGATTTTCTCCATTTTGAGGAGGATTTCCTAAAATTTCTTCTCCACAAACATTAGAACTTATCAATTTTAAAATACAAATAAAATCTTCACTTTCAACTATTATATTTTTTAATTCGCTTCTTAAGTTAATTAATTTAGAAGGAGTGATATCTCCACGAAAAACAGATTTTTGAAAATGAGATAAATATTTTTTACATATTTTAAATACTTTATTTACTCTTTTTTCAGAAACATCATAAAATACCCAAGCATAATTGTAGTTTATATTTTTCAATTTCCTTCATCTCCTAAACTAATTTGAATTTTTTAAAGAAAATGGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACATTTCATGTTTACGGTTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 2492-1125 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLP010000069.1 Fusobacterium periodonticum isolate Fusobacterium_periodonticum_BgEED13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2491 37 100.0 38 ..................................... AATTTTTCAAATCCTTTAACTTCTTTTTCTAGTAAGAA 2416 37 100.0 34 ..................................... GGTAAATCTATTACCGCATTTTTTACCACATTTG 2345 37 100.0 37 ..................................... TTAGTGATGAAGGTTATGGAAAAAATGCCTATATAGA 2271 37 100.0 36 ..................................... AGACATATTTACTGATTGCTACACATCTTCTATTTA 2198 37 100.0 39 ..................................... GTTTTAGGACATTCTCCAAGTGGATTGATTGAAAATCCA 2122 37 100.0 38 ..................................... TACTGAAACTAGAATGAAATTTGTGTGGTAGATTAGTA 2047 37 100.0 38 ..................................... GGCCATTAGGTATGTCTATGGATTTTGATAATTATAAA 1972 37 100.0 37 ..................................... ACTGGGATGAATATAGTGATCCTAAGATTGCAACAGA 1898 37 100.0 34 ..................................... TCTTTAGTTAGATCGTTAAAATAGAAATCAGATA 1827 37 100.0 37 ..................................... TGAGAAATAACTACTCTCTAATACTCTTTTATTCAGA 1753 37 100.0 35 ..................................... TGATGTTCCAACAAAAAATCCGTAGCTTTAGTTTC 1681 37 100.0 37 ..................................... TCTAAGACCTGATATGAATGAGATTACATATGATGAT 1607 37 100.0 41 ..................................... TAATGCTTTCAATTCTGCGTTAGCTTTCTCCATACTTTGTA 1529 37 100.0 37 ..................................... ATAAAGAAGTCTTTTGAGTAGCTTTTCTTAGCACTAG 1455 37 100.0 36 ..................................... CTACGTGTATCCTAAAGGAAAGAAGAAGTTATTTGA 1382 37 100.0 36 ..................................... AAGCATTTCAATAATACTATTCAATACACTCTCACT 1309 37 100.0 37 ..................................... AGAAGGAATTTGAAGTAGTAGACATTGTATATAATGT 1235 37 100.0 37 ..................................... TTATAAGTACTTATTTCACAATCATATCCGTTATTAT 1161 37 89.2 0 .................T..............TC..G | ========== ====== ====== ====== ===================================== ========================================= ================== 19 37 99.4 37 GTATTGAAGGTATTCCACTTATAACAAGGTTTAAAAC # Left flank : TAGCAATTTTCTTTTTTCCAACATTACTTAGAAAAGCAAATACAGTATTTTTAATTTTAGTTGTGTTAGGTGGAGTGATGTATTCAATAGGTGCATATTTCTTTGCTCATGACTATAAAAAATACTATCATATGATATGGCATATATTTATCAATATTGCTGCTATTTTACATATAATAGGAATAGGATTTTTTCTATATAGAAAATAGTAAAAAAATAAAAAAGGGACTTTACTTTTTATTGAAAAAGGTGTACAATAAATTACAAGTATCTAGCTTGTAATTTTAATTCACTTTTGGTTAGTTTTTTAACATTTCACTTTTCTATTCGTATTAAAAATAAAAATGATGGTTTATTACATTATTTTTCTAAAAAAAGTAATAAATATTTAATACAAAAAATGGAAAAGTACTAAGATTTCTCGATTTTGGTCAAATGTTGCTACCCCCTAAAAAGTGAATCAACTTACCATAAAATCAATATTCTTATACAAATCAAGG # Right flank : TTTTTTAGTAGAAAATATGTATAAACTGTTACAGTTAATAATTTCATTATTAATTTGTAGCAGTTTTTTATTTGTTATGATTTTACATAGTGATATAAAAAATAGATGTAAATATATAATAAATATGATATAATGATAGATAGAAAAAAATAGAAAGGAATAGTGAATTTGAATAAATGATAGATAAAATTACTATAAAAGGAGCAAGGCAACATAATTTAAAAAATATAGATATTGAACTCCCTAAAAATGAATTCATTGTTATAACTGGAGTGAGTGGAAGTGGAAAATCTTCTCTTGCCTTTGACACAATCTATTCAGAGGGGCAAAGAAGATATGTGGAAAGTCTTTCAGCCTATGCAAGACAATTTATAGGTCAGATGAACAAGCCAGAAGTAGACAGTATAGAAGGTTTATCTCCTGCAATCTCAATAGAGCAAAAAACAACAAATAGAAATCCTCGTTCAACAGTTGGAACTATAACTGAAGTTTATGATTAT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTATTCCACTTATAACAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 34870-43437 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLP010000136.1 Fusobacterium periodonticum isolate Fusobacterium_periodonticum_BgEED13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 34870 37 100.0 35 ..................................... TCCAGAAGTAGCACCAGTAGCAACTACACAAAAAT 34942 37 100.0 37 ..................................... TTAAGAAGTCTCTAGGAGATCCTATTGGACCTGTTCC 35016 37 100.0 38 ..................................... CTTTTAGTATCTCCAGTATAATCATAATCCTTTACCGG 35091 37 100.0 37 ..................................... GACCACGGAAGAGGTATACCAGTAGATATGCACCCCA 35165 37 100.0 38 ..................................... ATAAAACTCTAACCTTATTAAATTTTTTATTTCTAATT 35240 37 100.0 35 ..................................... TTAACATGCTTGTACCTCCCAGTACATTTGATAAA 35312 37 100.0 39 ..................................... CTAATATGGCTGATTTAGGTTTCCACAAGGATTAAAGGA 35388 37 100.0 35 ..................................... TGCTACAAATTGAGGTTCAAACATCAAATCTCCTA 35460 37 100.0 35 ..................................... CACTTCAACATTTGAATTCAAATCAGCACATAACA 35532 37 100.0 38 ..................................... TTCAGATAAATTTTTCTTTAAAGCTTCCTCTGCCCAGA 35607 37 100.0 36 ..................................... TTATAAGCTGCATAACCTGCTGTGGCCAAAGTTACA 35680 37 100.0 37 ..................................... ACATGTTCAGATCATTTCAACATCTCAGTGAGATGGT 35754 37 100.0 39 ..................................... TGCTTCGTGTATATCATACATATCACGTTCCCAAGTATA 35830 37 100.0 36 ..................................... CTAGAAATTCAAATACAGACTCACTGTAAATATATC 35903 37 100.0 35 ..................................... TCCAAACGATCCCATGGGTCGTTTGTTTTTATTGT 35975 37 100.0 36 ..................................... TATGTATCACGTAGTTTAGCAAGGGCTTCCATACGA 36048 37 100.0 38 ..................................... TACTGTAAGTATAGTTTAGCACTTCAGACTTTAAACCA 36123 37 100.0 38 ..................................... TCCTTTAATAATCCTAATACTGTTTGTTTTGACATATA 36198 37 100.0 36 ..................................... AGAAAGGTGTAAAGAGTACCATTTTTCTCTTTCAAT 36271 37 100.0 37 ..................................... ATTCTCCGAAAGAGAAGAATCCACCTAATGTTTCATA 36345 37 100.0 38 ..................................... TTAAACCTGATATTAGGTCTAATGTTTCTTTGTCATCT 36420 37 100.0 40 ..................................... TACATCAACTGCATCAGGAATAATAGTTTTAATTTTCATT 36497 37 100.0 37 ..................................... GATATTGCGTAGTCGGAGGACACGTACATAGTGATCT 36571 37 100.0 40 ..................................... CTTCTAATCCGTTATCACACCAAAGTGTAACTTCAATTTT 36648 37 100.0 38 ..................................... CCACGAGCTATTCTATTAATAGATTCTAATTCAGTTGC 36723 37 100.0 37 ..................................... ATATTTCCTTCAACATACCTAATATAGTTTGCTTTGA 36797 37 100.0 37 ..................................... GATAGCTATAACATCATAGCCGTTTTTATTTGCTTTA 36871 37 100.0 36 ..................................... TTTACTATGGAAGCTTTCTAATAATGCTCCGATACG 36944 37 100.0 37 ..................................... TTCCGAAATGAAAATAACTTTATTAGTTATCTTCCAG 37018 37 100.0 40 ..................................... TTAATATATTCATATTCTGCTTCTGAAATATGTTCCCAAA 37095 37 100.0 37 ..................................... TACAGTAGCAGAATGGGAATTACTTAATAATAGAATA 37169 37 100.0 37 ..................................... CTAATGTAGCACCAGGAACTATAAGTGCAACATCAAA 37243 37 100.0 37 ..................................... TTTTTCATATTCTTTCCTCCTAGAATTATATTATAAT 37317 37 100.0 37 ..................................... TAAGAGTTTGGAATTATCTAAAAAAATTGATGATAGT 37391 37 100.0 37 ..................................... TCAATACGTAATTAGAGGTATTGAATAACTAATATTT 37465 37 100.0 40 ..................................... TCTATACGTATCTGTATTCTCATCATACCAAGTACAATCA 37542 37 100.0 41 ..................................... CTTTTTGTATTTACAGTTGTAAAGCTATACCATTTATCTAA 37620 37 100.0 41 ..................................... TCTCTTACTTGTACCATAACGATACCTCCTTTGATATAAAT 37698 37 100.0 37 ..................................... TTACCTTATGACGATGAAAATGGTTATCTGCCTTATG 37772 37 100.0 40 ..................................... ACCAATATCCTTTTTTCTTGCACATAATTTTTCATAGTAG 37849 37 100.0 46 ..................................... AGCTTTGTGTCTAAAATTTTCATCAACTAGAAGTTGGTCTATAGAA 37932 37 100.0 36 ..................................... TCTTAAGATTAGGGAAACTTTTCTTTAGTTCCTTTG 38005 37 100.0 36 ..................................... ATATATGACATCAAGTGGGTTTATTTTAATAGTTTC 38078 37 100.0 36 ..................................... CCAAGCACCAGTATCGAATCTGTCTCCTTGTGAAGA 38151 37 100.0 39 ..................................... TAGTATTATCTATATTATTTTGACATTTTATCATATTGT 38227 37 100.0 34 ..................................... AGTATAACTATATCTTTTCTCTGTAGTCCAGAAG 38298 37 100.0 34 ..................................... AGTATAACTATATCTTTTCTCTGTAGTCCAGAAG 38369 37 100.0 38 ..................................... CTAGCTAGAACTAGATCCGCAACGAAATTTTTTCCATA 38444 37 100.0 41 ..................................... AAATGTTGAAGCCTTTTTAAATGTAGAAGCAACTTGCGATG 38522 37 100.0 42 ..................................... TCGATACGGAATCTCTGTTTAGTTTCCCCGTAAACAAATTCT 38601 37 100.0 38 ..................................... TAAGGCACTTAACTTATTTGGAAGAAATAGCTCTAAGT 38676 37 100.0 34 ..................................... TCAAAACCGATGTAGACCGGTTTACCACCTACTG 38747 37 100.0 37 ..................................... ATACATCAAATGCTCCACGAGATATATCACCTTCTAT 38821 37 100.0 40 ..................................... TAATAGTTCTCCTAGATTATTAATGTTTTGTGCCCATGCT 38898 37 100.0 35 ..................................... ACTACCATGAAGTGTGTATGTTTTAAAATTTTCCT 38970 37 100.0 41 ..................................... TGTTAATTCTATAGCCCCAGATAGTACAATTGCTAATGTTG 39048 37 100.0 36 ..................................... CTTTTTAGTCATAACAGCCTTTACTAATAATTCTAT 39121 37 100.0 37 ..................................... ATTTATCAACCATACCACATCCATTCAAACTACTAGT 39195 37 100.0 37 ..................................... AACAGTATATCTACAAAACCATATTTAATTCTGTAGC 39269 37 100.0 37 ..................................... CATCCTTCACCACTTAGTATTTGATCTAGTTCTTTCA 39343 37 100.0 38 ..................................... TCAGCAATTTGTAATGATTCTTTAGGGTAAGCAACTGG 39418 37 100.0 39 ..................................... CTACAGAAAATGCAAGAGACTTAAGTCTCTTAACAAGAA 39494 37 100.0 35 ..................................... CTGCAACGTAACTAACTCTTGGGTTCTTTTCCCAA 39566 37 100.0 37 ..................................... AGTATAAGCATTTTCTTCATTCAATTTCACCTACCTT 39640 37 100.0 38 ..................................... TCCTAAACAAAAAGTAGATAAAATATTTTCAAATCTTG 39715 37 100.0 36 ..................................... CTAGGTATTCTGGGATTATTTCAGTGATAGTCTTTT 39788 37 100.0 37 ..................................... TTAGTATCAGATTTTATCCAAGCATAGTGTAAATTAC 39862 37 100.0 36 ..................................... TTAATTTATTGGTTGACTTATTATATGCTTTCGTAG 39935 37 100.0 37 ..................................... AGTATCAGGTTGGATTTGACCCCAAACTTTCTTTTGG 40009 37 100.0 36 ..................................... TTAGGATTTTTAGCTTCATATACTTCTACAATTGCA 40082 37 100.0 41 ..................................... ACTTCTGGATCATTCTTCCATCTGAATGTATCCCATAGATT 40160 37 100.0 35 ..................................... TCTATTTTAATTTTATTATCAAGTCTACCCTTAGC 40232 37 100.0 42 ..................................... TTCATGGTCGTCGAAGAAGTCGACAGGGTCATTGTACTTATA 40311 37 100.0 38 ..................................... CTAACACAAAAACACGCAAAAAATTAACACGCGATTTT 40386 37 100.0 42 ..................................... TTATATCACTTAATCTATAAGTACCAGAATTTACCACTATAG 40465 37 100.0 36 ..................................... TTACATCGGACATAATTATTCTCCTCCTTATTTTAA 40538 37 100.0 36 ..................................... TCATTGTCAAGAAGTTGGCAGAGATTTCAGGAATTG 40611 37 100.0 45 ..................................... TCTAGGACTTAAAACTAAAAGTTTTCATCTAAGACACCTACGTAA 40693 37 100.0 36 ..................................... TTAAGTTCTTACCCTTGTAAGTTTACTTCCGTCTTC 40766 37 100.0 37 ..................................... AGTTAATCCAATATCAAGTTGAGAACTCTTTGCATTC 40840 37 100.0 36 ..................................... TTTAGAACTTCTCTTTCTCTGCCTTTATTTACAGTA 40913 37 100.0 35 ..................................... TTTATTTTAAAAGTGGATATTATTTATTTTAATAT 40985 37 100.0 37 ..................................... TTATCTTCTTGTCTTTCTTTATCAGCAAGTTTCTTTG 41059 37 100.0 38 ..................................... TGATACCATTGTTTTCGTCTATTCTGATATCATCTAAA 41134 37 100.0 35 ..................................... TTTTTCAACTCTTCAGATAATTCGATTACATCGTA 41206 37 100.0 37 ..................................... AAGTAAAACGTTAGATGACCCTATAGCTCCAAATCCA 41280 37 100.0 38 ..................................... AAATCTAGGTCAGAAGCTACTCTACCATAGTCTCCAAT 41355 37 100.0 37 ..................................... CTATATTTCTATAGATTTCCTTAAGTAATTCTACCAT 41429 37 100.0 37 ..................................... TCTAAGTGGTCCCATACAGAACCACCTTTTTCTTGTA 41503 37 100.0 38 ..................................... ATGAACCCCACCAATATTTTTAACTATTCATTTTCTTT 41578 37 100.0 36 ..................................... TTTTTGTTTCCATAATTATATATTTAAGGAGGTATC 41651 37 100.0 38 ..................................... ACTAATACACCATTATTAGAAACTGTTTGATATTGTGT 41726 37 100.0 37 ..................................... TTATAATGCGATGGACCCTAGAGAAAGACCTGAAATA 41800 37 100.0 37 ..................................... TCTCATCAGCTAAACCTCTATCAAGTCCTTGAATTAG 41874 37 100.0 36 ..................................... TCCATCTTTCTTTTGTTTAGATTTTCTCTTAACTAC 41947 37 100.0 44 ..................................... TAATACTGGTTCATCACCTGGGTCGTCTCCTTGTCTAGGTTTGA 42028 37 100.0 38 ..................................... CCTAAGAGCATCAATTCACACTCAATTAAGTTTATGCA 42103 37 100.0 40 ..................................... TCAGATATTACTGTTAGCTTTTTAGTAGTCATATACACCA 42180 37 100.0 42 ..................................... AGCACCAATATTAATAATTTTTAAAGAAGTTAGCCAATGCCC 42259 37 100.0 40 ..................................... TAAGTAATTTGAGAGATTCTAAACTCTCGCCGCGTTCACA 42336 37 100.0 42 ..................................... TGTAGTAAAGATATTATAATACCCTTTGATTTTCCATTAAGA 42415 37 100.0 38 ..................................... ACAGTATCACTCTTAGCCTTTAATAGAGCGTCTATGTA 42490 37 100.0 39 ..................................... TAGATGACTGTTTACCTAGTTATATACCAATAGAATATG 42566 37 100.0 38 ..................................... CACACTACTGCCAATACTTTTATCCACATATTCCCTCC 42641 37 100.0 39 ..................................... TCTTAATAAATCTATTGCTTCTGCATATTTGTAAACAGT 42717 37 100.0 41 ..................................... TTTATTGCAAATACGTCTTGAAATGTTACACGGTCTGCTAA 42795 37 100.0 40 ..................................... TTCTAGTAGCTCTATTTTTTCTGCAGGCTTCAGAATGCTC 42872 37 100.0 43 ..................................... CAAGAGAAGTATTACAATCTTTATAAGGAGGTTTATAATGAGA 42952 37 100.0 37 ..................................... TCTCACTTCTTTGTCTGCATCTTCTATCTCAAGAATT 43026 37 100.0 35 ..................................... ATTAAATAATTAATACCTCATTGAGTTGATAGTAA 43098 37 100.0 39 ..................................... ACTCCCGCAATTCTGGCCATTTCAAGCAACCAGTTAGCA 43174 37 100.0 39 ..................................... ATTCTTCAACTACTTTTGTTGGAACTTCAGACATGTCTA 43250 37 100.0 37 ..................................... TCTCCATTATGATTAAAGAATCCCATTCCTACTCTTC 43324 37 97.3 40 ........................C............ ACTTCAGCGATATCTTCAGTGGTAAAGACTATCTCATTAT 43401 37 81.1 0 ..T......AC.....................TC.TT | ========== ====== ====== ====== ===================================== ============================================== ================== 115 37 99.8 38 GTATTGAAGGTATTCCATTTATAATAAGGTTTAAAAC # Left flank : ATGATTGATTCTATTTTTTCAGGTGAAAGGATATAAGACTTCTCCTTTGTCTTTACTAAAAAACTATTTTTTTGTCTTGCTATACTTGCCCCCTCTGTTGAAATATATAAATCCATAATATTCCCCCTTTATTATTTTAAAATAAAATGAATATATTAGAAATAAAAATGTTATAATATATCTTAGCACAGTATTTAAAAAAATAAATAAATTTTTTTCTAAAAAATAACTTTACATTTTTTAGAAAATGGTGTACAATAAATTACAAATTAGTTATTTGTAATTTTAATTCACTTTTGGTTAGTTTTTTAACATTTTGCTTTTATATTTGTATTAAAAGTAAAATTTATGATTTTTTTAATTTTTTTCTAGAAAAAATAATAAATATTTAGTACAAAAAATGAGGAAATACTAAAATTTCTCGATTTTGGTCAAATGTTGCTACCCCCTAAAAAGTGAATCAACTTACCACAAAATCAATATCCTTATACAAATCAAGG # Right flank : TAAAATTATCACTGTATCAGTGATTTTTTTATTTTTAATTGCCAATATTGTTTCTTAATTGACATTTATTTCAAAAAATGATATATATTTTTATAAGGTCAAATATATTTTTGAGGGGGTTTAAAATGATTACATTTGGTAAAAATATTCAAAAAAGAAGAATTAATTTAGGTTTAGACACTAATGACTTAGCTAAATTAGCTAACTATCCAAATAGAAGTTACATTGAAAAGATTGAATCTGATAAAATGTATCCATCTACTAAAAAAATTCCAGATTTAGCTAAAGCATTATCATGGAAAATTGAAGATTTATTCAAAGATGTTGAAATTGAAGATGTTGAGAATGATTTTGTTTTTATTAAAAATATGTTAAAATCTATAAAATCTTATCAAGAAAACGAAACTCCAAAAAGAACTATTATTTTCTCTTTAGATGCTTGCAAAAAACATTACCTTTCTTTATTTGATAAATATATAAGAGAAGACTTTTTATCTAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTGAAGGTATTCCATTTATAATAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 20054-18050 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLP010000070.1 Fusobacterium periodonticum isolate Fusobacterium_periodonticum_BgEED13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================== ================== 20053 30 83.3 83 T..........T.T......A........C TTTTTTTATTTTTTAATAAAAAGCTCAGATTGACAAAAGATAGTAAAAAAAGTATTATATTAGAATGAGATTTATAGTCTCGT A,TA [20026,20036] 19937 30 100.0 38 .............................. ATATGGAATAACTAATTATATTTTTAAATATGATTTAA 19869 30 100.0 36 .............................. AATTCTAATAATACAATAAAAAAAGACTAGCATTAT 19803 30 100.0 37 .............................. TTAGAAAGATTTTATCTAGTTTTAGGTTCATATAAAA 19736 30 100.0 36 .............................. TTTAAATTTCCCTGCTATCATATCTTGTTCAGAATT 19670 30 100.0 36 .............................. ATTTTCTGTTCTGTACTGTATCCATTCTTTTATAAG 19604 30 100.0 35 .............................. ATTCAAATTTTTGATGATGGAGAACAAACATTTTT 19539 30 100.0 38 .............................. TTGCTTTTGTTCTTTTCATTTCATTTTCTAAGTTTTCA 19471 30 100.0 36 .............................. TGAAGTTTAATATTTTTAATATTTTGTTCTACATCA 19405 30 100.0 37 .............................. ATTAGAAACATATTTCTTGATGAGGTGGACAGATATC 19338 30 100.0 36 .............................. TTGTTCCAGTATTTCCTGATGTTAAACTGTTTTTTG 19272 30 100.0 36 .............................. ATTATTAAGTGGTACAGGTCACAAAGTTATGGAATT 19206 30 100.0 37 .............................. TTGACATGGGCTTATGGAAATAAGCAAGAGCTGGAAA 19139 30 100.0 36 .............................. GCAACTGCTTTCAATGTTTTTTCTTCTATCATCTTA 19073 30 100.0 38 .............................. ACTAGCTCATCTGTTCCATTTAGCCTTATAATTGCATC 19005 30 100.0 37 .............................. TTCCATATTTTTGGAATGATTTAGATTGTGCTTTTAT 18938 30 100.0 36 .............................. ATCTCTTGTATAGCTTAGTTCTTCTTTTTTGTTTAA 18872 30 100.0 38 .............................. GAAGAAAAAAAAGCAAAATTAATTGGAGAAGCTTTTGC 18804 30 100.0 36 .............................. AAATGGCTAGTTATAGCATTTAAATTAGAGCCTGTT 18738 30 100.0 35 .............................. TTAATCGATACTAGAACAATGATTAATAGCTTAGA 18673 30 100.0 36 .............................. GAAAGCATAAAATACCAAGACTTAGAATTAAAGTTA 18607 30 100.0 35 .............................. ATATTTTCGTTGATATTGATAAATTTATCTTTTTG 18542 30 100.0 36 .............................. TGCATATCTCCGTCTTTGTGAGTAACTCTTATTTTT 18476 30 96.7 38 ....................A......... AGTGAAAGACTTAAAAATAGAATATTAAAAATTATCGA 18408 30 100.0 36 .............................. AGTTGTGTAGTTGCTCCAGATTTCTCAACAGCTAAA 18342 30 100.0 34 .............................. TCGAAACCGCAAAAAAAGCCTTTGGCGGATTGAT 18278 30 100.0 35 .............................. GGGGGAGTTTGTACTCTACATGCTGACTCAGCTGA 18213 30 93.3 38 C..A.......................... AATTGAAAATGGACTAAATCTTTTTGTTTCCAATTTTC 18145 30 90.0 36 C..A........G................. ATCTTCTTTAATCTTATTATATTCTTCTTCAGTTAT 18079 30 80.0 0 C.....A.....G........GT..A.... | ========== ====== ====== ====== ============================== =================================================================================== ================== 30 30 98.1 38 ATTTAAGTATTATCATATTGGAATTTAAAT # Left flank : AGATTAAAACAAGTAATAACTCATAAAGATTTAAATAGAAAAATATCTTATCAGTATTTAGTAAGACTTGAATGCTATAAACTTATTAAACATTTATTAGGTGAAAAGAAATATCAAGCTTTTCAAATGTGGTGGTGATAAAATGTACGTTGTTGTAGTATATGATATATCATTGGATGAAAAAGGTAATCGTAATTGGAGAAAAGTTTTTGGCATTTGTAAAAGATATCTTCATCATATTCAGAAATCTGTTTTTGAAGGAGAATTGTCTGAAGTAGATATTCAGAGATTAAAATATGAAGTTTCAAAATATATTAGAAATGATCTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAAGAAATGTTAGGATTACAAGAAGATAAAACAGATAATTTTTTATAAAATTTTATTGTCTACCTTAGATAATGTAAAATTCTCAGCACTTCGACAAATATTATAAAAGTATTTATATTAAAAGATT # Right flank : AGAATTTTTTGAATAGACAACTGATACAGGAAAAATTTTTAAAAGACAAACATATATATAAATAAGTGATTGCTTTTTAAGAAGATTTATTATAGAATAGCACCAAGAGGTGATAATATGCTAGAAACTATTAATAAAAATCAAGTAAATATAATATTAAATAAAAATACTGATGAAATAGCTACTCTAATAGAAAAACATAGAAATACTATGATTACTTCTAAAAAAATAATAAAATTAAAAAAATTATTTAAATATACATTAGTTATTATTGCTTTATCTTTGCTTATAATAGCTATTCCTTTGTATTTAGTTACTTTAATTATCTTAATTATAAGTAGTATTAGTATATTAAAATCAATAATTTAATAAAAAATAAATTTTATTTAAAAACTCTTATCAAAAAAGATAAGTGTTTTTTTTATTGTCTAGAAGATTCATGGAAGAAATTAGAATTTCTTTTAATTTTAAGTATTGTTTTATTTGAAGTTTTGATAATG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAGTATTATCATATTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:86.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 108566-109910 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABFLP010000070.1 Fusobacterium periodonticum isolate Fusobacterium_periodonticum_BgEED13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 108566 30 100.0 35 .............................. ATAGGTAAAAATATTTATAATAAAACACTAGATGT 108631 30 100.0 35 .............................. AAATGGTAAAACTTACCTCTTTTTCTAGTGTAGCT 108696 30 100.0 35 .............................. AAAGCTTGGAATGTCAAGGCAATGGGTTCATAGTA 108761 30 100.0 36 .............................. TGTTTTTGTATATCATAGATTCATTATAAGTTACAT 108827 30 100.0 36 .............................. TTTTGGAAGTAATCCAGGAGAAGCAAAAAAATTTTC 108893 30 100.0 36 .............................. TAATTTAGAAGATTTTTTAATATATTTAGAAGCAAA 108959 30 100.0 35 .............................. CTAAATTCAACTCTAGCACCTATTAACTTTCCAGC 109024 30 100.0 35 .............................. TTTTTTCACCTTTTATAACCTTCTTGAGGGCTGCT 109089 30 100.0 37 .............................. TAACAGAAGCACTGGATATTATAGAAAGAATTAAGAA 109156 30 100.0 37 .............................. TAACAGAAGCACTGGATATTATAGAAAGAATTAAGAA 109223 30 100.0 36 .............................. AAAACTATCAGGAACTTTCACAAAAGAGTTAATCAA 109289 30 100.0 36 .............................. CTTTATGGGATAACTTAGTTGGTGCATTTAATTATG 109355 30 100.0 38 .............................. AAGGTTGTGAGTGCCTTGTGTACTACAAAAGTAATAAA 109423 30 100.0 36 .............................. GCAAGAGATAATGTACTATTATATGAATGACGGAGA 109489 30 100.0 34 .............................. TAGAAAATGCGAGTAAGCTAGGATTACCTATCCC 109553 30 100.0 36 .............................. GGAAAGAAAAAGAATAAATGACTTAGATGTACTTAA 109619 30 100.0 36 .............................. AGTTTTATTGCTTGTTCCAATTCATCCAACTCAGTA 109685 30 100.0 34 .............................. GTGGATAGACCTCTTTAGGAACTATCCCAAAACA 109749 30 100.0 36 .............................. TCTTTCAAATGTTCTAAAAAATAATGTCCTAATTCG 109815 30 100.0 36 .............................. TGGAATAAGGAATACAGAACCAGCTTTAGAAATGTT 109881 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 21 30 100.0 36 ATTTCAAAACATTTCATGTTTACGGTTAAT # Left flank : CCTACGGGAGTTCCATGTCCACCAAAAAACTTTTGTACAAATTCTCCTAAGATAACAAGTAAATATATAAAGAAAAACCAAATAACATGAAGAAAAAATCTTTTTCTAGCAACTAGAAATACTGCTCCAGCAGAAAAAAGCCATAAGCCATCAGGCAGTGAATAGATAGCCCATGTTGGAAATAGTTTTCTGTATAGAGTGGCTGTTTCTCTTGCTAAAAGAACGAAACCATTAATATCCAAAAAATGTATAAAATTGTAATAATAGAGGTTTTTACTTCTATACAAAAGATAAATTAAAGCTCCTGTAAGTAGAGGTAAAAAGACTAATAAAAATTTTATCTTCTTCATGCTCTTTCCCTTTCAAATATTATATCCATAGGTTATAGCCTAAAATGAAAAAAGTCAATAAAATTTTTAAAATTTAAGATAAAAAGAGTAATAAAAATATTTTAAAAACTCTTAATCTTTGTCTGTGTTCTTTCCCATCTACTTTATAAT # Right flank : | # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAAAACATTTCATGTTTACGGTTAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.80,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //