Array 1 179432-177089 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDNP010000002.1 Halorhabdus sp. FL145 scaffold2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 179431 30 100.0 39 .............................. GAGGCGTCTGATTCCGTGCCGTCGAGGACGGTCGTGACG 179362 30 100.0 36 .............................. CGTGACCCCAGCCAGAGCCCGACGGCCTACTACAGC 179296 30 100.0 35 .............................. ACGGACCTACGGCCAGGAACCGATCGACTTCAACA 179231 30 100.0 35 .............................. ACGTACTTGACTGGGGACGAGCTGTACTGCGTCCT 179166 30 100.0 35 .............................. GCTTTGTAGGCTTGGCCGCCGGCTGTTGCGGTATA 179101 30 100.0 37 .............................. CGATCGAAGGTGATGCTCCCGACGGTCAGCCACGACG 179034 30 100.0 36 .............................. CTCCTGGTCGTCGACGTCGTCCTGGTCGTCGTCCTG 178968 30 100.0 38 .............................. TCGGTCACATCGAACTGATGCAACTGCCCCTCAGTCAC 178900 30 100.0 37 .............................. GCCGAGTTGGCGGCCGAGGTCAACCGCCTCCAGAACG 178833 30 100.0 36 .............................. GCCATCCAGCAGCCCCGTGTCGCTGTAGCTGGTCGT 178767 30 100.0 37 .............................. CCCGAGGACGTCGATCCCCGGCAGGCGCTCAAGAGCC 178700 30 100.0 36 .............................. GAAGGGTGCGACCGTCGTCGGCGTGATCGACGCAAG 178634 30 100.0 34 .............................. ATAGAGACCGGCGTGGCTCAGGACGTAGGTGACG 178570 30 100.0 37 .............................. AATGCGGGAGATCCGGCCCAATTGAGGGGAGTGAAGA 178503 30 100.0 35 .............................. TTGCTTGATGTGGCGATCGTCGAGCAGTATCTCGA 178438 30 100.0 36 .............................. CCCTGCTGCCAGTTCGACCGGCTCGATTTCCCGCCC 178372 30 100.0 36 .............................. GTGTGGGAGGAGCGCCACGACCCACCGGACTGGGTC 178306 30 100.0 37 .............................. GGTCTAGTCATTGGTGGGGCGTGGACGATCGCAACTG 178239 30 100.0 36 .............................. CAGTATCGATTCAAGGAGATCGAAAACCGCTGCCAC 178173 30 100.0 35 .............................. GACGGTCCCGCGCTACTCCTCGACGTCCTCGTCCG 178108 30 100.0 36 .............................. CGAACGACAAGGATATTGGGACGATCTACTCAGACG 178042 30 100.0 36 .............................. AAAACGGCATGGACTCCGGACGCCGCGAGCATGGCG 177976 30 100.0 37 .............................. ATCAATACAGGCCACGCCGTTGTGAGCCTTGACAAGC 177909 30 100.0 33 .............................. ATGGCGGTGATGGAAGGCCAGTTCGGGATCAAG 177846 30 100.0 37 .............................. AATGGCAACGCGGGAGAGTCGATCCTTCGCAAAGGCA 177779 30 100.0 36 .............................. GGACGCACTTACCCTGTGAAGGGGTTGATGAGTATG 177713 30 100.0 36 .............................. TGTCGGCGGATCTCGCGCCGCGGATCGTGCCTCGGA 177647 30 100.0 36 .............................. ATGCAGTTGAGGGCGATCCTTCGTCTCGCCGGTCCT 177581 30 100.0 39 .............................. GTAGATCGCGCCGCCGCCCTCCTCGCTGGCCTTGAACTC 177512 30 100.0 35 .............................. CTCATCGACGGCAGTGACAGCGCGACGGGCGCGGC 177447 30 100.0 36 .............................. GGCGTGATCGCTGCGGCGGCGATCGGCGCACTACCG 177381 30 100.0 35 .............................. AACCCCACACTTGTCGTGCCCCTCTCCAAGATCCG 177316 30 100.0 36 .............................. AGCCATTCGCGCACCGACAGAGAGTTCACTCAGTCC 177250 30 100.0 36 .............................. AAGAACCGGGCGGCCTACGAACTCAAGGCCATTCGT 177184 30 100.0 36 .............................. CATCACGTGGCGATCTCCCCGCCGGCCGAGTGGCAC 177118 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 36 30 100.0 36 GTTTCAGACGGACCCTCGTGGGGTTGAAGC # Left flank : GGACCGGACCGTCGAACATCCGAATCTCGACCGGAAGGTGAGTTACCAGTATCTACTCCGGGTCGAGGCGTACAAGCTCAAGAAGCATCTACTGACCGGCGAGCCCTACGAATCCTTCGAGCGGTGGTGGTAACGTGGTGTACGTCGTCGCCGTCTACGATGTCGAAGCCGATCGAACCCGGCTGTTCTTGAACTTCCTCCGTCGGTATCTAACCCACGTCCAGAACTCGGTGTTCGAGGGGGAGATAACGGAGGGTGATCTGGAAGAGATCAAGCAGGAACTCGAATCGATGTTGGAGCCCGGTGAGTCCGTGATCGTCTATCGGATGAGCGCAGAACAATACGTTTCCCGGACAGTCTACGGCGAGGATCCGACTGAAGACGACCAATTTCTATAGTCTGTCATCGACCCCCCCGGTGTTTGGGGGCTACTGAAGGTCGACGAAAATACTAACAGCTATCCTCCCGTATTGGGCCATATATGGCCAGTTTCGGCCATG # Right flank : CTCAAAGTGCACAGTGGTTGTGCGTGCCGCTGTGCGGTCGACGGTGTATTGATACTGGTGTACTCATTCAGACTGATCGTTGCTGGTTCTAACCCGAACCACAATTAAATAATAGTAGCACTTAAAAATAGGGTTATCTAGCTCTCTTTAGCGGCTTCTATCTCCTGGGTAGCTTCGAGGACGAGATCGTGTGCACCACCGTTAGAGGCGACGAGACCCTTGCTGTCCGGTTCCCAGGCGTCGCCGTTCAGGTCCGTCACCGTGCCACCGGCCCATTCGACCATCGCCGCCCCGGCGATCGTGTCCCACGGGTTCGTTTCGAGATTCGTGATTGCGGCTTCGATCTCGCCGGCAGCGACAAGTGCGAGTGCGAGTTGGGTCGATCCGACTCGCCGGAGATCGCTGAAGCGTTCGACGACGGCATGCGCTGCGGCGGCGAACTGCTCACGGCTGTCAAAACCCCAGAAGTACGTTGGTGCGACCATGAACCCTTTCGGGTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 17375-15877 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACDNP010000018.1 Halorhabdus sp. FL145 scaffold18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 17374 31 100.0 35 ............................... GAGCTGTCGAACTGCATCGTGTCGATCTGGCTCTG 17308 31 100.0 37 ............................... GAGGACTGGGAGGCGAGCAGCGACTACTCGAAAGGGT 17240 31 100.0 34 ............................... TCGTACAGGACGCCGAACCCTTTCTGGAGAGTTT 17175 31 100.0 35 ............................... ATAATCTGTAGGAATAACGCCCCGAAGTGACCGGA 17109 31 100.0 37 ............................... GAGGGTGTACGGTGTCGAATCGAAAGCCGAAGAGATG 17041 31 100.0 36 ............................... TATCACTTCGGCCGCAACCCGAGCGTTACCACACTC 16974 31 100.0 35 ............................... CATCTCTTGACGGACATGTGCGTGATGCGCTCCAG 16908 31 100.0 36 ............................... AACGAGTAGTAGGCTGTCGGGCTCTGGCTGGCGTCG 16841 31 100.0 36 ............................... TGGTCTCGACGGACACCTACTCAAAGATCACTGACG 16774 31 100.0 37 ............................... GGTCGGCACCTCGAAGCTGGTTGGGCGCAAGAAGTCG 16706 31 100.0 36 ............................... CAGGACTTCCGCGACCGCAACGAGCACGAAATCCTG 16639 31 100.0 33 ............................... AACGAGGACACACTCGCCGCTGCTCAAGAGGCA 16575 31 100.0 36 ............................... GATTCAGTGAGAACGCTGGCGAGAAGCACGAAGACC 16508 31 100.0 34 ............................... GGGCGATCCGCGGCGAGGTCGTCAAGGCGACCGA 16443 31 100.0 38 ............................... GACGGCAAAATCTCACTGAGCGGGTCTCCCGCTGCTGA 16374 31 100.0 35 ............................... ACGTGGTACGACGCGCTCGGACCGAAGCTCCCGAA 16308 31 100.0 36 ............................... GATCGACGTTTCGTGCTCGAGGCAGAACTGGATGAA 16241 31 100.0 36 ............................... CGAATTGAACTCCGGAAGCCAGGCTGTTTCAACCCC 16174 31 100.0 36 ............................... GCTCATGGCCCCAACGTCACCCCCGTGATCGGCTGG 16107 31 90.3 36 .......................A.A....C CCGCCGCTCCCATCTGAGGGATCGAGGTTGCCACCC 16040 30 90.3 36 ..............T..-............C ACTTCCGGCTGCGGGGGTAATCGCCGTCATCGGCAC 15974 31 87.1 36 A..........G..T...............C ACCGGCGTGATCGACGTCTTCAACTCGATCATCGGG 15907 31 83.9 0 ............G.........A....C.TC | ========== ====== ====== ====== =============================== ====================================== ================== 23 31 97.9 36 GTTTCAGATGGACCCCTTGTGGGGTTGAAGT # Left flank : ATGCTGGGCGTCACCGCCGCCGTCGTGGGCCAGGGCCACGAGGACGACGTGGCCCTGCTGACCGATGGGCGCTTCTCCGGCGGGACCCGTGGGCCGATGATCGGCCACGTCGCCCCCGAGAGTTTCGTCGGCGGGCCGATCGGGGCACTCGAAGACGGCGACACGGTGACGGTTGACATCCCCGAGCGCTCGCTCGACGTGGATCTCAGTGACGACGAAATCGAGCAGCGGCTCGAAGATCGTGAAGATCCCGAACCGACCTACGAGTCGGGTGTGCTCGCGAAGTACCACCGGGACTTCGACTCGGCAGCCAACGGCGCAGTGTCGAACCCCAGTGTGAAACGCGACGAATAACCACCACGTCCACTGTATTCGCGAGATTGCTCGACAAGTCTCTGCGTTTCCATCGACCCCCCGGGGTTTGCTGGTTATTGAGGGTCGACGAAAACACTATTGGCCAGGCCGGCAAATGAGGCGCTATATGGCCGGTTTCGGCCATG # Right flank : TCCGTTACCGCCGCCTTGGAACGTCGAGCGCTCGTTTGGACAATCCCCCATGTGATCGAATATTGGGTTGCTGATTCACCGATGAAAAATGGTTCACCGAAAATTTGAGTGCTGTGAGAATGATTATGATTGGAGAGACCCCTGGAGGAAATGTATTGTGCGGACGTGCTCTTTCGCTCCCAATAAATTGATTGGCACTCGTCTACAGGTACACTTTGGAATCCCCCGAGAAGCCGATCCCGTCCACGGACTGAACGGGTTCGACCATCGTGACCACCAATCTGACCGGCCAAAGAGAAGCCCAATCGCTGACTTCACGACCCGAAAGCCGCCAAAACGGCATACTTGCGATTCGTTCAGACGGTGAGTGGGTCCGGGCGTTCTCGTGAGCGCAGCAAACGAGGGCTCGGAAGAGCGGAGCTCTTCCGGCGTCCTGCCGAGCGGTAGTGAGGCAGGGCTCGTGGAACATGGTTGCACGGCGTCTTGCTGAACGACGTGAA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGGACCCCTTGTGGGGTTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //