Array 1 2892-1138 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVFC01000007.1 Fusobacterium necrophorum subsp. funduliforme strain F1351 NODE_15_length_41179_cov_59.4655_ID_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2891 30 100.0 35 .............................. AAATTCAAATTACTATTAAGATTATTTATTTTAGA 2826 30 100.0 36 .............................. AATTATAAAGTGAAAAATAGAGAAACAGGAGAATAT 2760 30 100.0 36 .............................. TTTTCTTCCTCCTATCCGGGAGAGGAACCCCTCTCC 2694 30 100.0 35 .............................. TTTGTTCAAAGAGGCTCTGCCACATATGTGCCAAC 2629 30 100.0 36 .............................. AACATAGGTTTGAATATCCGGAGTAATAGTAAGAGT 2563 30 100.0 35 .............................. AAATATCAGGGGGAAGTTACTCGTAGTATAGGTTT 2498 30 100.0 37 .............................. TCGGAAAGGGCTATAAAACGTTTTGGAACTTCAAGGG 2431 30 100.0 37 .............................. ACTTCCTAACTGAAAAAATGCTTGAAATCGCATACGC 2364 30 100.0 38 .............................. CAGTTTTGTATTGATGCACAGTATCCCAAGCTTCATGG 2296 30 100.0 38 .............................. TTTTTTATCCGAGATTGTTTAATTCCGAATGCAGAATA 2228 30 100.0 37 .............................. TCTTTGACATCCCAAGCGTGGCTAAAGGCTACAAATA 2161 30 100.0 37 .............................. AAAAAATAAGCAAGATACCCTGAAATTGAAACAAGCA 2094 30 100.0 37 .............................. AAGGTACAAAAAAGGACAACCAAGACAACCATCGCAA 2027 30 100.0 37 .............................. CAGACTCTAAAAAAAATCTAATGTTGAGAATTCGATT 1960 30 100.0 37 .............................. GCCTTACCCGGACTGGTTCGTGAAAGTCTGGGCTTTC 1893 30 100.0 35 .............................. TTCCAAAATCCTTTACATTTCTCCCTTCAATTGCT 1828 30 100.0 37 .............................. CTCATCCAAGCGACACTTCCAACATTTGCTCGAATAG 1761 30 100.0 36 .............................. GGACAAAACGTAGGAAGGTTGTGATTTTTATGTTAA 1695 30 100.0 36 .............................. TTTACGAATACAGCTGAACTTAATTCGTCTTTATAA 1629 30 93.3 36 ...........G........A......... AAAAAAGAAATCGGTATTTGTATGTTATTTTCTTCA 1563 30 96.7 36 ...............A.............. TGGTAAAAAATCAAGGAGGTAAAAATATGAAAAAAT 1497 30 96.7 35 ...............A.............. CCTGATATTGTAAATATCAAAGCAATTTCTTATGA 1432 30 96.7 37 ...............A.............. TGGAATTTTTCCTTCTTCTAATGACTTAATGACACTA 1365 30 96.7 35 ...............A.............. TGAGGTGATTGATGAAAGCAATCTAGTCAATGCAA 1300 30 96.7 35 ...............A.............. ATGGGCAAGGAGGAATCTTATTTCGAAAAAACTTG 1235 30 96.7 37 ........................A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACAA 1168 30 73.3 0 ..C........TT....A.TT...TA.... | T [1146] ========== ====== ====== ====== ============================== ====================================== ================== 27 30 98.0 36 ATTAGAGTATTACTAGAGTAGAATGTAAAT # Left flank : TATTGAAATATAAATCAAAAATTAAAAATGGTTGTTATTTATATATGTTTATTTTTCGGAAAATTGATTTTTAATAGTAAAAAGAGCTCAAGTTTATCGCTGTGCAGTCTTAGTCTGTGCAGTGATTTTTTAATTTCTTTGATTTTTTCGCCATTTTAGTCGATGTTCAAAAAAATCTTTTTTGTGCAGATAATCGTAGAGTGTGCAGTGTCAAATTTGAATCCAAAAAATAAAAAAAGGGTCTTCTAAACCCATTCGAACAAACTTCTGAACACTTACGAAGTTTCTCATTTTTTCTCACATTCATTGCACATTTTCACATTTTTTCTATCATTTTTTATCATGCTTTCTCATTTTCTTTTACAGCATATTTTTTATCTTTCTTCAATATTTCTTTTATATTTCAATACCTTTTTTAAAAAATATTTTCTTCATTCTCAAATTCTTATAATAAATACCCCCTTACACATGAAATGGAAGATTGGAGAAAAGAAGCACTT # Right flank : TTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATCTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGACAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAATGCTTTAGGAGGTAGTTTGTGATGTG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAGAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //