Array 1 2273-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADL01000258.1 Ideonella sp. B508-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2272 29 100.0 32 ............................. TCCCCCATGTACTTGCCGTTCAAACACTCCAA 2211 29 100.0 32 ............................. CCCCTTGCCGTTGCAGCTTCGGGGTAGGGAAC 2150 29 100.0 32 ............................. GCGGATGCGATAGCGTCAGATTCGATGCTCAT 2089 29 100.0 32 ............................. CCATCTCGACATGCTGCCATTCGTCAGCAGGA 2028 29 100.0 32 ............................. CCATCCTTGGCCCGTTGCTGAGTGCGCTCAAA 1967 29 100.0 32 ............................. ATTGAATCATTCAACAATGCAGCATTTATCAC 1906 29 100.0 32 ............................. ATAACGAGAACAGAGGAAACCGCCAGAACAGC 1845 29 100.0 33 ............................. TCGGTTAGGAACTTCTCCACAAACGCAAACAGC 1783 29 100.0 32 ............................. TTTCGCGGGCCTTCTTTACTTCTCGATCAGTA 1722 29 100.0 32 ............................. GCCCGCGCATCGGCGCCCAGTGCCTCGACCTG 1661 29 100.0 32 ............................. AACATCGACGACGCGGGCGCCGTGTCGATTGA 1600 29 100.0 32 ............................. GATGGAGAGAGAGCATGAACTGCAAACAGTGC 1539 29 96.6 32 ............................T TCACGGCCCAGCCGCTGCCATCGAAGCCACCA 1478 29 100.0 32 ............................. TAGAAATAGAGCTTTTCGTAGGTGACGCCCAG 1417 29 100.0 32 ............................. TCCGGCCTCATGGAGCATATAAACAAACCGAC 1356 29 100.0 32 ............................. TGGCTTCCTCTGCGGTGGGGCGGTCGACGGCG 1295 29 100.0 32 ............................. GACGCGGGGGTGGGCAGCGGCGTCACTTCTTG 1234 29 100.0 32 ............................. TTTCTCGGGCCTTCTTTACTTCTCGATCAGTA 1173 29 100.0 32 ............................. TTGTCGGGGTCGGCCGGCTTGGGCGGCTCCGG 1112 29 100.0 32 ............................. TGTTCCCACAGGCCCCAGCCATTAGGCGCGTT 1051 29 100.0 32 ............................. GGCACGAACTGGAGTTGATTGTTCGCCCAAAG 990 29 100.0 32 ............................. CTTCCCCTACCTGCTCTACAAGGGCACGAGCA 929 29 100.0 32 ............................. TGACCGAGGCCTGACCGTGGCCCAGGTACGCC 868 29 100.0 32 ............................. GAGAGATGAGATGATCCTTTACAACTTCACGA 807 29 100.0 32 ............................. TTGGAAGCGGGAATTGAGCTCACCTCGACTCT 746 29 100.0 32 ............................. GGGCTGGCCTATGTCGTCTGCGACGCGTGCAA 685 29 100.0 32 ............................. GCGAAGGATGGAGAGAGAACATGAACTGTAAG 624 29 100.0 32 ............................. CATGTCGTGACAACCCCAATGCCCGTGTCAGC 563 29 100.0 32 ............................. AACCGGGCGGTGCGCGAGCTCGAGCAGACCCG 502 29 100.0 32 ............................. AAATGAGCTTGGATGTGATGCTGACGAATGCT 441 29 100.0 32 ............................. GGTCACCTTCGTCTGTCGGGCGTCCTTGAAGC 380 29 100.0 32 ............................. TGGTTCACCTCACCGCTTTGACCACCTTGACC 319 29 100.0 32 ............................. TTGTCTCACGCAGTGCTACTGATTGAGACAGC 258 29 100.0 32 ............................. CCGATCGATTTTGAGGTCCGCGAAAAGCTCCC 197 29 100.0 32 ............................. ACCCACGGGGCAGCCGTGAGCCGCACAGCCTA 136 29 100.0 32 ............................. ACAATCATCCGATTGATGGGTTGCTGTCAGCG 75 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.9 32 GTGTTCCCCGCGAGCGCGGGGATGAACCG # Left flank : GTGCTGGCTGCCGGAGAGATTGCTCCGCCACAGGCGCCGCCCGAATCGGTGCCTCCGGCCATTCCGAATCCAGACAGCCTGGGCGATGCGGGCCACCGCAGCCAGTGAGTCTGCCCCCACCGCGCGCGTCACATGCCATTCCTCGTCGTCGTCACCGAGAACGTGCCGCCCCGGCTGAGGGGCCGTCTGGCCATCTGGCTGCTGGAAGTGCGCGCCGGGGTGTACATCGGCGATGTGTCCCGCCGCACGCGCGAGATGCTGTGGGAGCAACTGTCCGAAGGCCATGAGGACGGCAACGTCGTCATGGCCTGGGCCAGCAGCAGCGAATCGGGCTATGACTTTCAGACCCTGGGGCAGAACCGGCGGGAGCCGGTGGACTACGACGGCTTGCGCCTGGTGAGCTTTTTGCCGGCGCCCGCGACCGATCTTTAACAAGCCGAAAATTCGGTAGATCCAACGCACTCCATTTTCCCCTGATGGGACAATGGTTTGCGTTTGGT # Right flank : GTTCCTGGCGTACCAAACGGCCACGCTCACCGGTGTCCCCGGAGCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4722-1029 **** Predicted by CRISPRDetect 2.4 *** >NZ_BADL01000257.1 Ideonella sp. B508-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4721 29 100.0 32 ............................. CCGATCGATTTTGAGGTCCGCGAAAAGCTCCC 4660 29 100.0 32 ............................. ACCCACGGGGCAGCCGTGAGCCGCACAGCCTA 4599 29 100.0 32 ............................. ACAATCATCCGATTGATGGGTTGCTGTCAGCG 4538 29 100.0 32 ............................. TTCCTGGCGTACCAAACGGCCACGCTCACCGG 4477 29 100.0 32 ............................. GTGGGTCAGCCTGCAGGACAGAGACCGTGCGG 4416 29 100.0 32 ............................. CACGCAGCTACGCAGGCGCCTGCGGGCCGGAT 4355 29 100.0 33 ............................. GAGAGATGATGACGAACTTTGAAACCCTTCAAC 4293 29 100.0 33 ............................. GCGCCGATCTCCAGGCGCTTCAGTGCGTCAGCC 4231 29 100.0 32 ............................. CCCGACCGCATCTCGGCCCACAACATCGCCAC 4170 29 100.0 32 ............................. AACCTCACCTCATCCTCCCTTCGCATTTGATG 4109 29 100.0 32 ............................. ACGACAACGCGCCCCCGTGCGTGGTCGACGGC 4048 29 100.0 32 ............................. GCTGGTTCTGGACCCGCGATGACGTGATCGAT 3987 29 100.0 32 ............................. ATCACCCAGCACTGCGTGGACATGCTCAACTT 3926 29 100.0 32 ............................. GCCGGCGCCCTGATCCTGGCCGAGCTGGAGCG 3865 29 100.0 32 ............................. CAGTTCCGCCGAGCGCGCGAGCAGGCGGCCGA 3804 29 100.0 32 ............................. GGCTCGACAGGCCCTTCGCGCCAGACCTGGTT 3743 29 100.0 32 ............................. CCGCCCTTGACTTCGCCCCGTGCGCCCAGAGC 3682 29 100.0 32 ............................. GGCATCAAGCTTTTCCGTTTGGGTTTTCTGTG 3621 29 100.0 32 ............................. GACAACATGGGCGGCACTGCGGCGGGCCGGCT 3560 29 100.0 32 ............................. CGATCCTGATGCGACTTTCCAGATTTCCTGGA 3499 29 100.0 32 ............................. GGCACCACGTTGCCGGGGGACACGCCGAACAG 3438 29 100.0 32 ............................. GGTCGCCTGGTCCAAGTCGAACATCGAGACGG 3377 29 100.0 33 ............................. CCGCCCGCGCCGTTGCCGTTGGTCTTGGCCAAG 3315 29 100.0 32 ............................. CCGTCTCGGAGGGCGAAATAAGCCGATCGAGC 3254 29 100.0 32 ............................. TCTACGGCGATGCGCGGGTCTCCGGAAATGCG 3193 29 100.0 32 ............................. GGCCACTCTCTGGTCTATGAAAGCGGCCTGCA 3132 29 100.0 32 ............................. GTCGAGAACGGAGGCTTTGTTCTTGATAGCGG 3071 29 100.0 32 ............................. GACACCGCCGACCGCCTGCGCGCAACCATGAC 3010 29 100.0 32 ............................. GCCAGGCTCGATGCCATCCGGCGCGCCAAAGA 2949 29 100.0 32 ............................. GCCGTGCCGGCCAACCTGCTGGCCCCCGACCA 2888 29 100.0 32 ............................. CTGACCTCCCACTTGCCGGGCAGGAAGCCGTC 2827 29 100.0 32 ............................. GCCCGGCGCCAGCGCGCCTCGGCCATGACGGC 2766 29 100.0 32 ............................. TACATGCCCAGCAGCATCGAACTCACCAACGC 2705 29 100.0 32 ............................. TGCATGCCCCGAGTCATGTGATCCGGGCCATG 2644 29 100.0 32 ............................. GAGCGCAACCGCCGCCGGGCCGCCGAGGAGGC 2583 29 100.0 32 ............................. GCAAACGTCGCAATTGTTGGCGCTCGCATGCC 2522 29 100.0 32 ............................. GCCGGCTCGACGCCGAGCGCCACGATGGTCAG 2461 29 100.0 32 ............................. ACCCTGCCGAGTTCATGACAGCGTGCGAAGAA 2400 29 100.0 32 ............................. TCCGCCGTCATCGGCATCATTGGCACCGCGCC 2339 29 100.0 32 ............................. CTTCTCCCTGAGGATCTTGTCCATGCTCTTGA 2278 29 100.0 32 ............................. TTGGCCAGGTCGGCCTTCAGGTAGCTGGCCGG 2217 29 100.0 32 ............................. CCCGGTCCCAGCTGGCAGCCAAGCCGGCCGAG 2156 29 100.0 32 ............................. CGGCGCAGGCCTGGGGCCGCCTGGTGGCCGAG 2095 29 100.0 32 ............................. CGCCCGATGGAGCCCCAAGCGCTGAATGTCAG 2034 29 100.0 32 ............................. AGCCGCTTCCCCGCAGGGTGGTACTTCACCGA 1973 29 100.0 32 ............................. ACCATAGAGTCAGGACCGGTCGGTGTAGTACG 1912 29 96.6 32 C............................ GCCGATGACCGGCTGTATCGCCTGGTCGGTCT 1851 29 100.0 32 ............................. CAGACGCAGGCAGACGCGGGCCGACTGGTGGC 1790 29 100.0 32 ............................. TGGGACCAACGCGAGCAAATGATCCAGCCCCC 1729 29 100.0 32 ............................. ACCCAGAAGCAGCAGACCATCCTGCTGCTCGT 1668 29 100.0 32 ............................. ACGCAGGCGCTGCACCTCACGCGCATGCTGGC 1607 29 100.0 32 ............................. GCGCGCATCCTCGCCGGCCACTCCAACGGCGG 1546 29 100.0 32 ............................. AAAGGGCTGTGATGAACGCACTGCACATTGCA 1485 29 100.0 32 ............................. AGCCGCTTCCCCGCAGGGTGGTACTTCACCGA 1424 29 100.0 32 ............................. GTGGGCGGCATGCCGACGATTCTGTACCAGAA 1363 29 100.0 32 ............................. AGGCAGGCGTCCAGTCGTTCACGCTCGAGTTC 1302 29 100.0 32 ............................. CGCGCCAGGTCGCAGGTGATGCGCACCAGTTG 1241 29 100.0 32 ............................. GTGGTCACGCTCCCGATGGTGTTCCCGACGGA 1180 29 100.0 32 ............................. GAGGTCTCGTCCCAGTCGATTTGCCACGACTT 1119 29 100.0 33 ............................. TCCTGAAGGTGGCGGCTGATGCCGGCCTGCTGC 1057 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 61 29 99.9 32 GTGTTCCCCGCGAGCGCGGGGATGAACCG # Left flank : GCGGGGGATCAAGGACGGCCCCTGGCCATCGGAGCAAGCTGACAGCCCCCTGCCCAGGAAGTGCCCATGAACCGCCGTCAACTGACNCACGCCGCTCCCCTGGCCTGGCTGGCCGCAGGGCCCACCACGGCCGCGGCCTGGAACCCGGGCGAGCACGACTACGACGCGGCCGTGCAGCAGATCTGGCGCAGCGGCCCCCTGCGCGGGCTGGAGGGGCGGGCCCTGGGCCTGGAGCTGGTCCGTTGCGCCACCCTGGCGCCCAGCAGCCACAACACCCAGTGCTGGCGCTTTGCCATCGGGCCGGACGCCATCACCGTCTTGCCGGATTTCAGCCGCCGCTGCCCGGCCGTGGACCCGGACGACCACCACCTCTTTGTCTCGCTGGGCTGCGCCACCGAAAACCTGGTGCAAGCGGCCGGCGCGCAAGGCCTGCGGGCCGAGGCCACGCAGTGCTACTGATTGAGACAG # Right flank : TCCTCTCGAACGAGAGAGGCCTTTGTGCTGTCTTGTTCTCCAGCGATCGCTGGAATGTCCACTGGCGTATCGCGTCGAGAGCGTCTGCAGGCGTTTGCGTCGCCCATGAAAAAAGGGAACGCCGTTGGCGTTCCCTTCCTGAGGCAGGGGGCGCGGCCGCCGCGGGCCACGACCCTGTTGTGTCGCGATCAGGCCTTCTTGGCCCAGGCGCTGCACCAGCCCTTGCCGGACACGGTCTTGCCGCCAAACAGGCTGCAGGGGCCGGCGGCGTCGCCCGCCTTGCCTTGGAACAGAGCGCAGCCATGGCACATCTGGCTGGCCTGGTGCTGCGGGTACTTCTTGCCATCGGCCTTGGCGGTGTCAGCCACATAGCCCAGGCTGACGGCCTGCGGGTCCTTCTCGTCGAGCTTGGCTTGGGCCATGGCGCGGGCGGCAGACAGGCCAGTGCCGACGGCGGCGACGGTCATCATGAAGACGCGGCGATTGGTGGACATGAAAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //