Array 1 195154-192566 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBAC01000006.1 Klebsiella pneumoniae strain C1741 C1741_S7_L001_R1_001_contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 195153 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 195092 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 195031 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 194970 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 194909 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 194848 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 194787 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 194726 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 194665 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 194604 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 194543 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 194482 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 194421 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 194360 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 194299 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 194238 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 194177 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 194116 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 194055 29 100.0 10 ............................. ACATAGCGCC Deletion [194017] 194016 29 55.2 0 CGA.A.G.A...........T.GTGTT.C - Deletion [193988] 193987 22 75.9 32 -------...................... GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 193933 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 193872 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 193811 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 193750 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 193689 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 193628 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 193567 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 193506 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 193445 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 193384 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 193323 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 193262 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 193201 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 193140 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 193079 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 193018 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 192957 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 192896 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 192835 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 192774 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 192713 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 192652 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 192594 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 44 29 97.7 31 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //