Array 1 46812-45988 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMYT01000021.1 Halanaerobium congolense strain WG10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 46811 37 100.0 35 ..................................... CTGATCATTACGTTGCTTTAGCTGTAACTGTTGAT 46739 37 100.0 34 ..................................... TCCTACGATATCATCAACATCAACTTCAAATAAT 46668 37 100.0 35 ..................................... AGCATAATATTTGAGTGACCTTTTGCCAGCTGCTA 46596 37 100.0 34 ..................................... GACATTATACCCAATGTCCCAAAGAGTTTGGAGG 46525 37 100.0 34 ..................................... TGACACAAATATGTCAAATGTTAGATCTGATGAA 46454 37 100.0 34 ..................................... GACATTATACCCAATGTCCCAAAGAGTTTGGAGG 46383 37 100.0 34 ..................................... TGACACAAATATGTCAAATGTTAGATCTGATGAA 46312 37 100.0 34 ..................................... GGGTTTACGCAACAGGATCTGCAGCAAAAATAAG 46241 37 97.3 35 ......................G.............. AATGGAACTAGATATTTCTGCGAGCTGGAAAGATA 46169 37 97.3 35 ......................G.............. ATCTATAAATTAATTAGTAGAACAAAAAAAGGAGG 46097 37 97.3 36 ......................G.............. ATGTAATAAATCATTCGGCAATAACCCCTTATCTTC 46024 37 97.3 0 ......................G.............. | ========== ====== ====== ====== ===================================== ==================================== ================== 12 37 99.1 35 ATTGCAGTCCCCTTTGTTGGGGACTGAGAATTGAAAC # Left flank : TTATTTATCAGTAAAGGTGTGATAAAATTGATGTATGTTCTGGCATACGATATTTCAACTGAAAATGCTAAAGGTAGAAAAAGGTTGAGAAAGGTTGCTGAAACCTGTGAAAATTATGGACAAAGAGTTCAAAAATCAGTATTTGAATTTCAATTAGATGACAAAAAATTTTTAATGATGAGAAATGAAGTATTGGAATTAATGAACAAGAAAAAAGATAATATAAGGATCTATAAAATAATTGCTCCAAAAGATAATTATGTAGAAGAACATGGGAACTTTAAGTCTGTAGATTATGATAATGACACATTGTTAATTTAATTTGCGAGGGGGGAGTGTTTGTTAAATTACTGCTTCTTTCGCAAATGGTCATAAATACTAATTTAAGAGCCACTTAGAGGAGATGAAGTAAAATGATTTTATTTTTTGTGGAGGTGATAATGGATATTCGCAAAATAAGCTTTATGAATCTTGATTTAACAGGGCTAATTTAGCCTGCT # Right flank : CAAAACCAACTCCATAAAAAGTATTCATTCTTGAAATTGCAGTCCCCTTTGTTGGGGGCTGAGAATTGAAACTCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAGTCCCCTTTGTTGGGGACTGAGAATTGAAAC # Alternate repeat : ATTGCAGTCCCCTTTGTTGGGGGCTGAGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.80,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 8763-8139 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMYT01000028.1 Halanaerobium congolense strain WG10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ===================================== ================== 8762 38 100.0 36 ...................................... ACATCTTTTTCTAGGGCTACCATATTCCTTTTAACC 8688 38 97.4 35 .....................................C TTGTTCCTAGATCATCAGCTACTTGTTGCAGCGAA 8615 38 100.0 34 ...................................... TAACTTTTTCATATTTACCACTCCTTATATATTA 8543 38 100.0 37 ...................................... AAATTCAGTTAGGTCAATTACACCATTATAATTTTCA 8468 38 100.0 34 ...................................... TTGTCACCCTTATGACACAGTGTATCTAGTATCT 8396 38 100.0 35 ...................................... TGCCGAAGGCTGAACGTTAGAGAGAGTACTTAAAA 8323 38 100.0 35 ...................................... CTTCATTATATCTTTCTGGGTCGATACCATTTAAA 8250 38 89.5 36 ....G...A.........C..............A.... TCTTTTTCTTGTCATCAGACTTTTTCTTAATAGTAA 8176 37 84.2 0 ....G...C.........C.............T.-.T. | G [8146] ========== ====== ====== ====== ====================================== ===================================== ================== 9 38 96.8 35 GTCAAAATTAACAGTCCATTACAACAAGGATTGCGACT # Left flank : TCGCTGGTATAATTAAAGATTATGGTGTAAGAGTGCAGTATAGTATATTTGAATGTGATTTATCAGATGAAAAGTATGATGAATTATATAATAGATTAATTGAAGTAGTTAAAGCAAATAAAGACAGCATCAACATATATTTTTTATGTGAAAGATGTTTGAAAAATAAAATTAGCTTAGGAAAAGAGAAAAGATTCAGCATTAGAAGCGACGTTATTATAATTTGATAATATTTACAATCAATGATAAAATATAAATAACATAATAAATATTGAATATATGTAGTTAATTATAATCTCGAAAAAAGAGCTTTAAAAACACTAAGGTTGCCGCATTTTGAGTATTTGAGAGTATTAAGGGGAAAATAGGAGAATAGATGAGATAATCAAAGTTTATTTTTCACTGTTTTCTAGTAAATTAATGCAAAATTTTATAAAAACAGAGGGGTTGCCGCAAATGGCAATTTGAAGCTTGTCACAACAGGCTTCGCAAGGGGTACC # Right flank : ATAAAGAGAATTTTAGAATAAGAAATATTAAGAGGAAAACTAAAGGTTAAGTGTGAGCTTAATATTTATTCTTTAACTTCTAATAAAGTATTTGCCCAAAAAAACTTGAAGATATACTTATAAATCAAAAAATATATGGGACTTATTTTGTTCTTAATATTATGAAAAATGAATTTTATAATATATCATATTGATGTCTATAGAATATAGTTAAGCCAGCGCCCAAAATCATGATGAGAATGAGGTTTTTTATTATTTCAAAAACTATAATACTATATAGTATTAAATAAAACAGGAGGTGTTTTAATTGGATTATGAAATTGTTGTTGATCCCTCTGAAGTAAGAGAAAGATCTTCAGATAATGGAAATTTGACAAGAATAGATGACATTGAATCAGATGATGAAGAAAAAGAATAATCACTCTCAATTAATTAGTAGACAAATTAATAATTTATTTACTAATTTATCACACAACTACAATATATTATTCGATAATTGG # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAATTAACAGTCCATTACAACAAGGATTGCGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 20819-20635 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMYT01000028.1 Halanaerobium congolense strain WG10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 20818 37 100.0 35 ..................................... ACTATCGATCTAAAATATTCTGCCCTAACAAATAT 20746 37 91.9 38 ........GA.T......................... GGCGAGGGTGTTGGAAGTTGCAATAATTATGAAGAAAA 20671 37 86.5 0 ...........A......C............ACT... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 92.8 37 GTCTAAATACTGAGTCCATTAAAACAAGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAACAAGGATTGAAACCCTTTTACAGTTTCGTTTCCTGGTTTCATTCTAAAAT # Right flank : TACTAGTTGCAATAAATGCAGCTAGTTTTTTATTTTTCACCAAAAATTTAACTACCTTTGCCAGGGAGTTGTCAAAGTGAAGAGATATCATATTATTATAAGAAATTAACTAGATAGCAGGTTGATTTGATCAAAATACCTTTGTTATAAAAACTTGGAGGTGCAATCATTAATAATATTTTAAGGCTTTTAGACAGTTTAGAGGTTTTTCTAATGTCAAAAGTTCCATCAATTAGTTTTTTCTTAGGATTAATGGCGGGAATTTTATCAATGGTAGTTTATATAAACTATTCTTTAGCTACTTCTGTCATAACTTTAATTTTAAGTTTTTTGATTTTTGAGCTTTACAAAAGATTTTTTGCTGGAGAGCCTGATTTTGTGATGCATTTTGATAAAGATGATATTCAAGACGGTGATGATTTTTCAGAGATGATTACTAAAATATTTGAAGAGGCAGAAAAGAGAGAAGATGATTAAATAAGGGAGGTATCTTGATGATT # Questionable array : NO Score: 6.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAATACTGAGTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: R [matched GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //