Array 1 34598-37795 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHFWW010000013.1 Klebsiella pneumoniae strain CQ8 NODE_13_length_131621_cov_109.530340, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 34598 29 100.0 32 ............................. GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 34659 29 100.0 32 ............................. ATCTATTCCAGCATCGAGCTGCACCCGCAATT 34720 29 100.0 32 ............................. GTGGTTCGGGCGGCTCCGCGCAAAACCACGCA 34781 29 100.0 32 ............................. CACCGCGTTGCTGTTCCCGCCGGTCGCCGCCG 34842 29 100.0 32 ............................. ATATCGCCGTCGCAGTGGTAGAATCGGTCTTG 34903 29 100.0 32 ............................. CCCGGAGGAAACGTGGCAACAGTTCAATACCC 34964 29 100.0 32 ............................. AACGGAATTCAGTGGAGAGATGGGAAAGGTAG 35025 29 100.0 32 ............................. AGGACGGCGAGCTGATCGCCGGACACGGTCGA 35086 29 100.0 32 ............................. GGATACAAATCCAAACAGCGAGCCATTTTCCT 35147 29 100.0 32 ............................. TTTATCGGACCGGGCGCGGACACGCAGACAAC 35208 29 100.0 32 ............................. GCGGGTTAGTTATCCATGGTGCATAGGGGCGA 35269 29 100.0 32 ............................. TCACTTGATAGTTTATCTCGCCGCCGTGGCGC 35330 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 35391 29 96.6 32 ............................T TTTTTTGACGCGTTCGGACTTCAGGTAATATT 35452 29 100.0 32 ............................. GGTTTACCAGCGGTAAAACAGCAGGAAGGAGA 35513 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 35574 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 35635 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 35696 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 35757 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 35818 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 35879 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 35940 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 36001 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 36062 29 96.6 32 ............................C CGCTGGTTAATGGGCTTCCCGGAAGGGTGGGC 36123 29 100.0 32 ............................. TCTATCGCAACCACCGCTGAGGCGCTGATTGA 36184 29 100.0 32 ............................. CCAATTCATTAAAATACTCTGCAAGTATATCG 36245 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 36306 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 36367 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 36428 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 36489 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 36550 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 36611 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 36672 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 36733 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 36794 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 36855 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 36916 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 36977 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 37038 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 37099 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 37160 29 100.0 32 ............................. AACGTAATTGGCTTACGGGGCGGTCGGCACAA 37221 29 100.0 32 ............................. TCGCCGCCTGTTTTTGTCTCTTTCCGGGTGAG 37282 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 37343 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 37404 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 37465 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 37526 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 37587 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 37648 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 37709 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 37767 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 53 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTATTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //