Array 1 60755-58425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPCX010000023.1 Flavonifractor plautii strain 1001136B_160425_D5 NODE_23_length_65235_cov_30.111, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 60754 33 100.0 36 ................................. CATTTTTCTTTTACTGCTCCATTGTCCCCTTTGGTC 60685 33 100.0 35 ................................. CCCTTGATTACCCAACAGCCAAAAGAAAAAGACTG 60617 33 100.0 34 ................................. CCCTTGATTACCCAACAGCCAAAAGAAAAAGACT 60550 33 100.0 34 ................................. CTCAAATATGCAAGATGTAGCACAATCCACAAAC 60483 33 100.0 34 ................................. AGTAAGTAGGCGTGTAGTTCCTCAGAATGAGGAC 60416 33 100.0 33 ................................. ACGATGGGGAATACCTGTATATTTAGACAAGGC 60350 33 100.0 35 ................................. TCCAAGCTCTGGTGTCCGCCGACCAAACACAAATG 60282 33 100.0 35 ................................. TACAGGTATTTGGACGGGTGGACAGGTGCTAGACC 60214 33 100.0 35 ................................. CGCATTGATTGATAAGAAAAGTTTCGTTGAGCTCC 60146 33 100.0 34 ................................. TTTAATCCAAATATTGCAATACCGTCCGATAAAT 60079 33 100.0 34 ................................. AAGAAATTGCGGCGGCGGTTGAATCGTTTGCAAC 60012 33 100.0 34 ................................. TGGTTTAAATTCTATGCAAGCAAATTCAGCATAT 59945 33 100.0 34 ................................. TCCAAGCTCTGGTGTCCGCCGACCAAACACAAAT 59878 33 100.0 34 ................................. TACAGTGTCAACGGGGCCTTGGAGTGACGCAGAT 59811 33 100.0 34 ................................. GTCAAGGCTTTCAATGCAAGTTGACCAACGTGGA 59744 33 100.0 34 ................................. CTGTTATTGATGGTATGTGGAAGCAGTGTGAACT 59677 33 100.0 34 ................................. AACCCTACACCTTTTAAAGCTGTAAGGCCCTCTT 59610 33 100.0 34 ................................. CCCATTATACCAATTTTTTGTTTGCAATTAATTC 59543 33 100.0 36 ................................. GACAAATGGTGGGAATTTACAAGCAGTTGATACAAC 59474 33 100.0 33 ................................. TTTCCATCCTGCCGGATATGTATCAGGTGCCCA 59408 33 100.0 35 ................................. TGCCATGCGTGCTCTTGATGAGTTGGAAGTGGAAG 59340 33 100.0 33 ................................. ACAAGCAGTTGATACAACGATAAAAGAGGACGA 59274 33 100.0 35 ................................. GGGGTAATGCAAGCCCCCTCACCACTTAACGCCCA 59206 33 100.0 35 ................................. AATCGCTGGCTCAATTACAGGACGTGCCGGAATAT 59138 33 100.0 34 ................................. TCACCCATGAGCTCACGCCAATGCTGCCATACGA 59071 33 100.0 35 ................................. ACGACCAGAAGCAAGTTCAGGGCCGAAAGCCTGCC 59003 33 100.0 36 ................................. GGCGAAGTGCTTGCGCTTGGCCTTAATCTCGGCCAT 58934 33 100.0 34 ................................. GGCGAAGTGCTTGCGCTTGGCCTTAATCTCGGCC 58867 33 100.0 34 ................................. ACATAAGCTTGGCCTTTATATCCCGATTGAGGGA 58800 33 100.0 35 ................................. ACCCATAGGATCCAAACCGGAGCAGACATACCGAC 58732 33 100.0 37 ................................. TGACCAGAGGACATGGTGGGATAACGGGGATGCCCAA 58662 33 100.0 35 ................................. GGCATTGAGACGGGGGCCAACAGCTTCGGCTACCT 58594 33 93.9 38 ............A.........G.......... AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 58523 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 58456 32 84.8 0 .....C......A...............-..CC | ========== ====== ====== ====== ================================= ====================================== ================== 35 33 99.2 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGTGCGATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTTTAAGAAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTCGTAAAGTTTGCT # Right flank : CGTCTTACAGAGGCGCCTGAGCCGTTTACAGGAGCCACCGCATAGGGGCGCGGGTTGATTCAGATTTTTCACCCCGCGCCTCTATTGTTTGCGCTTCTTTTCGTTGACTGGTCTAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCGTATTATGTGGATTTCAACTGACTGGAAGGACTATGAACTGCTGGACTGCGGCGGCGGCGAGCGGCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCTCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGCTACAAGGGGCTGACTCTCAACATCAAGCCCATGAACTTCAAGCATACCGGCGTCTTTCCAGAGCAGGCGGCCAACTGGGACTTCGCCATGGAGCGCATCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //