Array 1 523617-528516 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQWZ01000002.1 Hydrocarboniphaga daqingensis strain CGMCC 1.7049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 523617 28 100.0 33 ............................ GCACCGCCGCGCCCGCTGTAGCAGATCCGGCAG 523678 28 100.0 32 ............................ AGCTCGACCGCGTCAGCATCAGCCGGCGCGGT 523738 28 100.0 33 ............................ GACACGATCCGGAGGCCGCGATGCTCGACCGGC 523799 28 100.0 32 ............................ GCAACGCGCTCGGCGCTGTCGCGCACGCTGCT 523859 28 100.0 32 ............................ TGAGCGACACGCCTGTCGGCGCACGCCCGAGC 523919 28 100.0 32 ............................ TGGTACGACTGGCGCTACAACGCAGACCGTAT 523979 28 100.0 32 ............................ GCTTGGCCAGCTGCTTGAACGTGCGGCTGATG 524039 28 100.0 32 ............................ TCGCGGCCGGTGACGCGCAGCCACAGTACGAC 524099 28 100.0 32 ............................ TGGTAGCCAGCACCGTCGAGCGCCAATTGCAC 524159 28 100.0 32 ............................ AGCGGTCGAACGGTGCGGCGACGACGTGCAGA 524219 28 100.0 32 ............................ AGTCGCAGATCGCCGACGCTGCCCCGTCCCTG 524279 28 100.0 32 ............................ TTGGCGCGCACGGTCTTGGCGTAATGCAGGAC 524339 28 100.0 32 ............................ TCGCCGCGCAGCCTACCGTGACCACGCTCGAG 524399 28 100.0 32 ............................ GCCAGCTACTGCTGCAGCGGGTAGCGGCTGGC 524459 28 100.0 33 ............................ AGACGATCAAACTCGCGGCCAACAGCCTTCCTC 524520 28 100.0 33 ............................ ACACGATGCCGCGCATCCAGATGGTCGATCCGC 524581 28 100.0 32 ............................ ATGAAATGCGCTTGCCTCAGCGGCGTGTTGAT 524641 28 100.0 32 ............................ TTGCGCAGCTCGCGCTCGAGCAGCAGCGTGGC 524701 28 100.0 32 ............................ TTTGCCGACGGCCGCTTCGCACAGCGCCAAAT 524761 28 100.0 32 ............................ TCGTCCATCTCGGTCACAAGCTGGATGGACAG 524821 28 100.0 32 ............................ GAGCTCAGCATCGTGTTCGACGACCCCGCGAT 524881 28 100.0 32 ............................ TCTGCACCGCCTCGTTGAACTGGCCTTCCAGA 524941 28 100.0 32 ............................ TCGAAGGCGACCTCGACATCGACGGCGTTTTG 525001 28 100.0 32 ............................ CGTCGCATCGTCCTCCGGCAGCAGGCCGAGCG 525061 28 100.0 32 ............................ GGGAACGAAACGAAAGCCGCAGAGAATCCACG 525121 28 100.0 32 ............................ TCGAGCAGCACGTCGGCGTGATTCGTCTACGT 525181 28 100.0 32 ............................ AGTCGGGCATCGCGGTACTGAGCGAAATGATC 525241 28 100.0 32 ............................ AACGGCTACCGGTCTATCGACGACGTGCGTGA 525301 28 100.0 32 ............................ GCCACCGCCTCCGCTGCCCAGGCCCTGCGCTG 525361 28 100.0 32 ............................ ACATGCAGATCCGGCCAAGCCAAGGCAAAGCG 525421 28 100.0 32 ............................ TATGTCGTGGTCTACGACTGCGGCCGAAACAA 525481 28 100.0 32 ............................ CTGCATCCGCGAAGCGGGCGGCATTTCAATCA 525541 28 100.0 32 ............................ GTTCGTTGGCCAGCTCGTCGGCCGCTTTCATG 525601 28 100.0 32 ............................ GCTTGCACGTCGGCTCGTGCCTGTTCCGATGC 525661 28 100.0 32 ............................ TTCAGCGGATCGACCATCTGGATGCGCGGCAT 525721 28 96.4 32 .C.......................... TGCGGCCCGTCAAGCAAGACATCGAGTTGTGG 525781 28 100.0 32 ............................ AGATCCGGCACACGTGGGGGTCGAGGATGGTC 525841 28 100.0 32 ............................ TTCGCCTTCACCATCGCCGCCACCGTCACCGC 525901 28 100.0 34 ............................ ATACTACGGCGTCGATCAGGACCCGCGCCTGGAA 525963 28 100.0 32 ............................ AGCACCGCGTTGGTGTCGAGCCGGCTCAGCGG 526023 28 100.0 32 ............................ GATGAGACGGTCGCGTGCACGCTGAACATCTA 526083 28 100.0 32 ............................ TGGACAGGGAACCCCAGGTCACTGGTGACGCG 526143 28 100.0 32 ............................ AACAACGCGGCCGACATCGTCAACAACAACTG 526203 28 100.0 32 ............................ AGATAGATGATCAGGTCCGTCTCAGACGGCGG 526263 28 100.0 32 ............................ TGCCGCAGATGCCAGTGCGTCCCCAGCGCGGC 526323 28 100.0 32 ............................ AATATCGGCCCCGCTGAACTCATCAAGCTCTG 526383 28 100.0 32 ............................ TCATCATCAATCGCATAGATGACCGCGAAGTA 526443 28 100.0 32 ............................ GCAGCAAGCGCTGCCGTTCGTGACCGGCGACG 526503 28 100.0 32 ............................ CTCAGTTGCGTCAAGAAATAAGCGACGTGTGG 526563 28 100.0 32 ............................ TTGCCTTGCGCCACCGGCGTCAGGCCGAAGTC 526623 28 100.0 33 ............................ GGGAAGTCGGCGACGAATCCGCTGAACGAGATG 526684 28 100.0 32 ............................ ATCCCACACGCCAGCAGTCCGGTGGTACTTTT 526744 28 100.0 32 ............................ TATCCGAAGAGGCCCGGCGCTATGAAGCGTTC 526804 28 100.0 32 ............................ AGCACGCCAGGTTGTGCCCGCGCAGCGGTTTC 526864 28 100.0 32 ............................ GCAATGACAACGATCTAGCCGCGCAGCCGACC 526924 28 100.0 32 ............................ AGTTCGCGCGGCGACAGCATGCGCATGCCGAT 526984 28 92.9 33 .............C.............G CAGGACAAAGCTCCATGCCTTCGTATCTATTCC 527045 28 100.0 32 ............................ TGAAAGCGCTCCGCGCATGCGGCCTTGAGGAC 527105 28 100.0 33 ............................ TGGCGCAAAGGCCGCGCTGGACCAGGGCGTCAA 527166 28 100.0 32 ............................ TGCTGGCGCTGCTGCGGGCCTGATGTCGTCGA 527226 28 100.0 32 ............................ GCGACGCGCACGCCGACGGCCACCGCGTCGAG 527286 28 100.0 32 ............................ TCGAGGCGATGAGCCCGGCGGATCGGCTGGGG 527346 28 100.0 32 ............................ CAGAAAATGGCGCCGCACAGCAACAGGTGCAG 527406 28 100.0 32 ............................ CGCGACAGGCGCAGTAGCGCGCAGAAACGTAT 527466 28 100.0 32 ............................ TCTCCGATTGTCTCCGGCACATGCGGCAGTGG 527526 28 100.0 32 ............................ CATATGGCCTGCCAGCGGCAGCGCTATGCCGT 527586 28 100.0 33 ............................ CTTGAGCAGAAGGTCGACACCATCAATGCCGAA 527647 28 100.0 32 ............................ TACCGCGTGAATGTGCACTCGCAACATATTGA 527707 28 100.0 32 ............................ ATGCAGGTCGCCAGCTGCAGCGCGTCGCCAGG 527767 28 100.0 32 ............................ AGCGCAGCCGCACCGCAACGCGCTCCGCGCTG 527827 28 100.0 32 ............................ AGTCACGGCGGCGTACACGTTCGCTACTCGTC 527887 28 100.0 32 ............................ TTACCGGAGTTACCCAATGAGTGACCATGCCG 527947 28 100.0 32 ............................ GACAAGAAGGCCGAGGTAGCGCTGCGCAATCA 528007 28 100.0 33 ............................ GCTGCGGCCCAAGTGGACTTCGCGTTCTTCCGC 528068 28 100.0 32 ............................ CTCTACCTGCGCCTGAGCGCCAACCAGTTAAC 528128 28 100.0 32 ............................ CCCGACGCTGCAGCCGCAATCCAGATCAGTCG 528188 28 100.0 33 ............................ CAGTGCCCGCGCCCAGGCGCTGCGCCCGGCGAG 528249 28 100.0 32 ............................ TGACGCCGGCCCACACCCGCGAACTGATCAAT 528309 28 100.0 32 ............................ AGGGACAGACGATGATTTTCCTTTCGCGCGGG 528369 28 100.0 32 ............................ TCTGCGCGCGCAGCCGCCTCTGCTTGATCTTT 528429 28 96.4 32 ...T........................ AAGAGTGAAGCCTCGACTTCATCGGTGGTCGA 528489 28 92.9 0 ............A...C........... | ========== ====== ====== ====== ============================ ================================== ================== 82 28 99.7 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : GTCCGCGCTGGAGCCGCTCGCTTCTCCGGCCTGGTTGGTGGGCATGAAAGACCATTTGGAGATTGCGGGCGTGCTGGAAGTGCCGGCGAACACGAGTTGGATTTCCGTTCGGCGGGTCCAGGCGAAAAGCAATGTCGATCGCCTTCGTCGGCGGCAGATGAAGCGTAAGGGCTGGACCGCAGAGGAAGCAGCCGCCGCCATCCCGGCGGCCGCCGCCGAGCGGCTCGACCTTCCGTTTCTCAGCATCCGCAGTGCCAGCACCGGTCAGACGTTCCGCCTGTTCATTCGCCAGCAACCGGCCGCCGTTATGCGGGCCGGCAACTTCAACGCCTACGGATTCAGTACCGAAGCGACGCTCCCAAGCTTCTGACCCAAATTTTTAGAGAGGCGGCACCGGCCAATGATTTCAAAGGCTTGGTGGCCGCCTCATTTTTTGGGTGTGCTACCGCCTGGCTGCTGATTCCGCTTTAATGTCGAGGCCTTGCCGGAGTTTTGTTCTA # Right flank : ATCGGCAGCAACACGTACCCGATCGCGGTGATGAACAAGGCCTTGCGTGTGGGCGTCAAGCGGATGGGCGAAATCGCTCATGCTGCTGCGACCACGGGCAAAAGCGAACGCAGCGCCTAGATTGTGGCTTCCATTTATGTCATCGCCGGTTTTGACGGCGCTGGAAAGTCATCGATCTTGGGCGAAGCCGTGTTGACTGCTGAGTCTGAATGCTTCAATCGGGATCTCGCGGCAAAGCGGCTGATTCAGGACAACCCCGGTCTGCCGCTCGAAGAAGCCAACAGTCGCGCACGGCAACTGGGTTTTGATGGCTTGCTCCGCGCACTCGAAAACGGTGGCACTTATGCGTTCGAGAGCACCCTGGGTGCTCGCAGCGTCACTAAGGCATCGATCAGTAGTCCGCCGCCGATTGGGCAACTCGTCGGCGCTTGGCTCGTTGCCGAGCCAACCCGTCATTGACCCTGCTGGTCCAGCCCGCCGCGCCCTTCCACGCCGCTTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //