Array 1 2436-27 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCJY010000030.1 Peptostreptococcus anaerobius strain DFI.6.4 PMLHJOHO_30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2435 29 100.0 32 ............................. AGCCACTCGATTAACTCACTAAACTTATCCAA 2374 29 100.0 32 ............................. AGATTTGTGGATATATATTTTCCATCGCTAGA 2313 29 100.0 32 ............................. ATGGCGGTGTATATAAGAAATATAACCTTGTA 2252 29 100.0 32 ............................. AAGGCAATCGCCGTCTATCTCCTCTAAAAGCC 2191 29 100.0 32 ............................. ATAAATCTAACTCCTCTAGCAGATTCATTAGC 2130 29 100.0 32 ............................. TGAGAAATGGAAGAAATTAGAAATTATTGTAT 2069 29 100.0 32 ............................. ATGTGAATGGAAAATCTTCCCCTGATCAAGCA 2008 29 100.0 32 ............................. TGTTCTGGAGTCCAGATATTTCTCTTATCTAC 1947 29 100.0 32 ............................. GAAGAACTTGAAAAAAGAGTTAATACTCTGGA 1886 29 100.0 32 ............................. CAGCTTGAGAGGGATACCACTCTACATCATCA 1825 29 100.0 32 ............................. CCACATTAAGAACATATGTTCTAAATGTAAGG 1764 29 100.0 32 ............................. ATTTTCTTTTACCGATACATCAGATAAAGTGT 1703 29 100.0 32 ............................. TAAGGAAATAGCAACTAGTGTATGGCAATCAA 1642 29 100.0 32 ............................. ATATAGGTCTTTTTAATATTGTGAGTATCAAT 1581 29 100.0 32 ............................. AATATTCTTATTTCTGGCATACTTGCCAAGCA 1520 29 100.0 32 ............................. GGCATCAACCGTCCAATTTAATAGGGCTAGGG 1459 29 96.6 32 ............................C AGCATTCCAGCCATCAACAAAGGTTTGCTTCA 1398 29 100.0 32 ............................. ATAAATGTAAATGCCAATGGCAGCATTGCTGA 1337 29 100.0 32 ............................. ACTAGTTCCAAATAACCACCCCCTAATCGTCC 1276 29 100.0 32 ............................. AGTCAACCGCCCTTTTAGATATCCCTCGCATA 1215 29 100.0 32 ............................. ACATTCATAGTATATCCTGTGCCACTATCTTC 1154 29 100.0 32 ............................. ATAGGCTACTTGCTAGGTGCACTAAAAAATGA 1093 29 100.0 32 ............................. AGGTCAACTACAGTATACAGCAGGGGTAATTA 1032 29 100.0 32 ............................. ATAATTCTTGTCCACCAGTTCGGTAATCCCCT 971 29 100.0 32 ............................. ATCTTTGAACTTACATAGTCATTTTTGTAGCA 910 29 100.0 32 ............................. GATGCCTCTATCAGTTCCCAGTCTTCTACAAG 849 29 100.0 32 ............................. AAAGCTATAGATAAACATAACAATAAAGGAGA 788 29 100.0 32 ............................. ACCCCAGCTATGCCGTTAAATACTCCGCCAAA 727 29 100.0 32 ............................. ACTGGTACTCTACCTAATTGCTGGGCTATAAA 666 29 100.0 32 ............................. GAACGGATTAAATTGTGGTGTACCAATATATG 605 29 96.6 32 ............................C ATAGTAATTACAATGAAATAACACTAAGTAAC 544 29 96.6 32 ............................C GGATATTTTAACTAAAATAGGAAATTTAAAAA 483 29 100.0 32 ............................. GGGGCTTTCTTGGGAAGTTTCTGTTGAAGAGT 422 29 100.0 32 ............................. ACGTACTTACCTGATATTTCAGTTGCTTTACC 361 29 96.6 32 ............................C GAGCGTAGGGCTGTCATGCTTGATGGTGGCGG 300 29 100.0 32 ............................. ACAATATCATCTCCTCTGAGGCTATCATAGCT 239 29 100.0 32 ............................. GGCCATATTGTTGCTTTACCATCATATTTAAC 178 29 100.0 33 ............................. ATAAGTTGAAAAATACAGATGTGGAATATATAG 116 29 100.0 32 ............................. AATATAAACTTTGCTACTATAGTGACTTTACA 55 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.7 32 GTACTACCCACACACGTGGGGGTGATCCT # Left flank : GTGATGCTAGCTATAAATATAAATAAAGATTTGATCACCATAGGTATACAAAAGATATTAAATGGCAAAGACATTAAAATGTTTATTGATATTATTAATGTCGGCGACAAGATTGGAAATATAAAAATCACAGAAAATAATCGTGTAGAATCAATAGATGCAAAAGAACTTATGAACATATTTAAAGAATTTATTGGTTGTATGCATATTGTAACTTATGGCAACATGAAAGAATTTGAGAGAGTTGTGGTTTTATTAGATAAAAATGGATATAGCTTGCGAGATTATCGTATTTATGATTTATTGAAATTCGTTAAAAAAGATATGAGGGGTCTGGATGATTATAGCATTATTAATGTATTAAAAAAGTATGATATAATAATAGAGGATCAAAATGATACAGGTTGCTTTTTAGATGGTATATACGAGTTGTCTACAAAAGTAAATAAATTTACTAGGTTTATGGAAAAGGAATGAGGATATTACTGGGATCTATTAGT # Right flank : TGGCCATATTGTTGCTTTACCATCATA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTACCCACACACGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.80,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 1902-1386 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCJY010000053.1 Peptostreptococcus anaerobius strain DFI.6.4 PMLHJOHO_53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1901 28 100.0 33 ............................ TGGCTGCACAAACTATAATTCTATATCTGTAGA 1840 28 100.0 33 ............................ TATCTTTCTTCTTTTCTCCACCCGTCTATCATC 1779 28 100.0 33 ............................ CTGCCATCTATTCAGCTCAGATGGTTTGTACCC 1718 28 100.0 33 ............................ TACATTTGCCACAAATTCTGCCGCTATCCCTAT 1657 28 100.0 33 ............................ CGCAAAGTTATACGTCAAGGGTAAGACTGATTT 1596 28 100.0 33 ............................ CTCACTTGGAGTAAGAGTCATGACCTCTCCTGT 1535 28 100.0 33 ............................ CAGCGGAAGGACATGAAGATTATTATGTTTTGT 1474 28 100.0 33 ............................ CACTTTTTAAATTCATTAAGTCTAACTTTACCG 1413 28 96.4 0 .......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.6 33 GTACTACCCACACACGTGGGGGTGATCC # Left flank : TTTGCTACTATAGTGACTTTAC # Right flank : TATAAAATGTTTTCCCTTGCTTCAAGGGCAAAACTTAAATAAAAATTGTTGAAATGAGGTTATACTATGAATATTTTAGGTAATAGACTAAAAGAATTAAGAAAAAAAAGAGAATTAACTCAGGTAGAGATAGCAACTAAATTGAATATAACTAGGAGAGGTTATCAGAAAATAGAATCAGGTGAACAAACAACCAAATACACTACACTCATTGCAATAGCTGACTTCTATGATGTTAGCATTGATTACCTTGTTGGACGTACTGAAAATAAAGATAGCCACAAGCTATGATATAGCTAAGTTTATCATTTACAATTAAGTACTACCCACACACGTGGGGGTGATTTTTAAGCCTGCTCAAAATCCTTTTATTGTCAGTAATTTAGATACAAATGATAAGAAGTCGAAAAGCCATGCCAAGGTAATAAGTGTGGCGAATACGAGTTCTTTTTTGGTTTTCGATTTTAGTGATAAATCATCCAAACCAAGTAAGTTGTTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTACCCACACACGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.80,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //