Array 1 184825-182541 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCSK010000002.1 Klebsiella pneumoniae strain NNKP16 NNKP2216.2_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 184824 29 100.0 32 ............................. TTTCTATTTGGCTGGAGGATGGAGATCTGGCA 184763 29 100.0 32 ............................. ATTAACCTCGGATCTGGTGCCGGTGGCGCGAA 184702 29 100.0 32 ............................. CCATCTGGCTGTGTACTGTCAGCGTTCACTGC 184641 29 100.0 32 ............................. CGACGATCAATTGCTACTGCCGGGGTCAGGAG 184580 29 100.0 32 ............................. ATAGTAGTTATTAATAGTCAAGGGGTAGCGGC 184519 29 100.0 32 ............................. CAGGTCTGCGCTGACTACCGGCACCGGCTGCG 184458 29 100.0 32 ............................. GTCGCAGGCGTTTCTCGCCCAGTAAGAATGGG 184397 29 100.0 32 ............................. CGGGCCGCCGGCGCGTCGGGATACTCCCAGGT 184336 29 100.0 32 ............................. ATATCTACATCTACGGCACCCCGATCCGCAGC 184275 29 100.0 32 ............................. CCGAGCAGCTCTACGGCGTCTTTTTTGCCGCC 184214 29 100.0 32 ............................. GGCGAAGTGTGGGCCGTTGCGCGTGTGTACGA 184153 29 100.0 32 ............................. CGCGTAAACCCCTGGCTTACTCGTCCACCCTG 184092 29 100.0 32 ............................. ACGGGTTGTGCTTGTCTCAGCCCCGGCGAATG 184031 29 100.0 32 ............................. ACCCATGGCATTGGCCACATTGGTCGTCCCCT 183970 29 100.0 32 ............................. AATCTGCCAGCAAATCGAAGAAGGCGAAATAA 183909 29 100.0 32 ............................. ACACCATTATCCTGATAATACTCCTGGAAAAC 183848 29 100.0 32 ............................. CCCCGGTGCTAACCGGGGCAGTGTCGTTATGC 183787 29 100.0 32 ............................. AGCCTGGGCAACGGTGCGGTTCATGTAGAACA 183726 29 100.0 32 ............................. GCCAGGTATTTGGTTCCTGCTTCCACGTAGAC 183665 29 100.0 32 ............................. TTTGACGCAATTCAGGGATTATTCACTGAGAT 183604 29 100.0 32 ............................. GACCAAAAAGAAAGCTCCGGCCGAGGCCCCGA 183543 29 100.0 32 ............................. GTTTTGTGCGCCATGTGTCCCCACTTGGCGCC 183482 29 100.0 32 ............................. CGTAGTGGTGCGTTTACCAGCCCCTGCCGGGC 183421 29 100.0 32 ............................. TGACTCCTGCGCCAGTGAGAGCCGTTTTTCTG 183360 29 100.0 33 ............................. GCCGTTCGGGGCCGGGGTGCCGGTGAGGTTTAC 183298 29 100.0 32 ............................. AAAATGTGCGAGCTGTGGGATGACCTGAATGA 183237 29 100.0 32 ............................. ATTACGCAGAGCAAATGGGATTCACTGTTACT 183176 29 100.0 32 ............................. TCAGGCGACCAGGTCGTCATGGACGTTTATAT 183115 29 100.0 32 ............................. GTACTGGAACCCCTTGGAACTGCGCAAAATGG 183054 29 100.0 32 ............................. CCTCCGGATTCATGTCCCATCTGGGCAATGAA 182993 29 100.0 32 ............................. GAGATACCGTTTTAATTCAATACGGCGGCGGC 182932 29 100.0 32 ............................. GGTTATGTCGGTGCTGGTATCACCAACCACGC 182871 29 100.0 32 ............................. ATTGATCTGCAGGAATACAACGCAGCCACTGA 182810 29 100.0 32 ............................. CGATCATGGCCGCGCATACGGTACTGACAGCA 182749 29 100.0 32 ............................. TCTGACTGTCGAGGCATGATGTGCCCTCCGAT 182688 29 96.6 32 A............................ ACGGTCCGACAGAACGGCGCTGGAATCTCTCG 182627 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 182569 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGGCGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTTTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCCTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //