Array 1 1080-4462 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABVMH010000018.1 Klebsiella pneumoniae isolate Klebsiella pneumoniae, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1080 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 1142 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 1204 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 1265 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 1326 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 1387 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 1448 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 1509 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 1570 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 1631 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 1692 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 1753 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 1814 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 1875 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 1936 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 1997 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 2058 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 2119 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 2180 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 2241 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 2302 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 2363 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 2424 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 2485 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 2546 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 2607 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 2668 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 2729 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 2790 29 100.0 32 ............................. TCGACGCCCCGGAGTGGGAAGACTTTGGCACC 2851 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 2912 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 2973 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 3034 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 3095 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 3156 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 3217 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 3278 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 3339 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3400 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3461 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 3522 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 3583 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3644 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 3705 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 3766 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 3827 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 3888 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 3949 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 4010 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 4071 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 4132 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 4193 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 4254 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4315 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4376 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 4434 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 56 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //