Array 1 246-704 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYBZ01000051.1 Flavobacterium psychrophilum strain FRGDSA 1882/11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =========================== ================== 246 42 100.0 27 .......................................... ATTGAAAAAAGCATTCTCTCGAATAGT 315 42 100.0 27 .......................................... ACCGGAAAAAGCACCTCGATTAATAGT 384 42 97.6 27 .A........................................ ACTGAAAAAAGCACTATTTTCAATATC 453 42 100.0 27 .......................................... GCGTGCAAAAGACCCATCTCCAATAGA 522 42 95.2 27 .......................T....A............. GCCTGCAAAAGACCCTTTTCCGATAGT 591 42 97.6 27 ................................G......... TCTTTCAAAAGCAGCATCTCCGATAGA 660 42 81.0 0 T..A..G.T......G.......T..........TT...... | TTG [669] ========== ====== ====== ====== ========================================== =========================== ================== 7 42 95.9 27 AGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Left flank : TATATTTTTAAAGCACTTTCTATTGCAAATGAATGATTAGAAAGTAAACCACCAGAAATAGGGCTGAAATTTCTCCAAACCGCGGCTGCCTGATAAACGGCTTGAGTACCAGTAGGAACATTTAAAGCACAGTTTGACTGAGTAACATTACCGAAGACATCTGCATTAATAGCTAAAGGCATTGTAATGTAACATTTTACTGTGGTTAAACGTTTACAATCTGCAAAAGCCTCATCTCCAATAGTA # Right flank : AAAGCGCAAAAGCATTCTTTCCGATAGATCTAACGAAATTCCCAACGTTAACCGACGTTAAACCTTGACAGGAAAAAAACGCAGATTCTCCAATAGCAGTCACGGCGTAGTTTTCTGAATTATAAGTTACTATTTCTGGTATTACCGCAACTCCACTAAAATCAGGGTTTCTAGCCACCTTAGCAGTAAAAGGAGCTGTTGAAGAAGTAACAGTATATTTTATACGGTTTGCTGTAAAAGTTTGTGCTATTCCTAAAAAAGGAATTAAAATGACAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTATTGTATAATAATTGTTTTTGTTGCCTTACCTTGGTTTGTCATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACATTTATTTCTGAATGATTAGTTGTTTTTATTAACTGCCCTAATGTGTTGTAAAAATTCACTTTTTCTAATTGTAAGCCCTCTTGTAAGGTTATGTTTAAAATTTCTGAA # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.12, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCACAGAATTAGGAATTGTAACTGATGTTAAACCAGAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 82-2864 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYBZ01000014.1 Flavobacterium psychrophilum strain FRGDSA 1882/11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 82 46 89.1 30 TGC.G...G..................................... AACCAAGTTCACAAGTACAAGACAAATTAT T,TC [86,91] 161 46 100.0 30 .............................................. AAAACAGAAGTGCAAATTAGCAAGGAAGTA 237 46 100.0 30 .............................................. TGGTTTGTTCCTTCGGATTTATGAGATGGT 313 46 100.0 30 .............................................. TAAAGAAGGTACTAACGTACCTGTGGGTTT 389 46 100.0 30 .............................................. ATATATTTGTACCATAAACAAACAAACTCA 465 46 100.0 30 .............................................. AAAATAAACCAAGCGTGTCAGACGATTTAG 541 46 100.0 30 .............................................. ATTGAATTAAAAATGCTTCAAGACACCGCT 617 46 100.0 30 .............................................. CCAAATGAATAACCAAACAACGTTGAACCT 693 46 100.0 30 .............................................. CTCACGCCTGAAGTTCTCATAGGCATTAAT 769 46 100.0 30 .............................................. TTACGAGCCAATTAACAGTAAAAAATACTA 845 46 100.0 29 .............................................. CCTCATTCCTGCTTCATCTGGATCCATAC 920 46 100.0 30 .............................................. AATATGCAACTTACGGATTGTTTCTTCGTC 996 46 100.0 30 .............................................. ATTTGAATTATTATTTCAATCTGAAAGAGT 1072 46 100.0 29 .............................................. AATTTTCTAGTTCCGTTAATGCCTCTTTC 1147 46 100.0 30 .............................................. ATAGTTTAAAAAAAATATTTGCAAAACCAA 1223 46 100.0 30 .............................................. GAAGCGGTGGTTATTCCAGAAGTAAAGCCT 1299 46 100.0 30 .............................................. ATGGAGAGAATTACAAACCACACAAACCAA 1375 46 100.0 30 .............................................. CAACGCCAGCAAGCACAACACCAGCACCAC 1451 46 100.0 29 .............................................. ACGTTCAGAATTTCACAACAGAATTGTTG 1526 46 100.0 30 .............................................. TGACAACGGGATAGAAGCAAATGTTTCTAA 1602 46 100.0 30 .............................................. GAACTTCTAAAAAAAGAAACAGAGTACATC 1678 46 100.0 30 .............................................. TCATTAACCGACACCGTTATATTTCCGCCA 1754 46 100.0 30 .............................................. TGTATGCTAAATACCAATCTGAGGGTTACA 1830 46 100.0 30 .............................................. TAGAGGCTAATGCGTGGCATGGTGCTACAG 1906 46 100.0 30 .............................................. TGACTGGGCAAAAGTAGCCGTAATAGACAC 1982 46 100.0 30 .............................................. TGATTTTCTTGAATATAGTATTTAGCACGT 2058 46 100.0 31 .............................................. GGAACCATATTTGTTATTAAATATGTATCAT 2135 46 100.0 30 .............................................. GCTAATATGTGGCTCCTTAATGGCACACGA 2211 46 100.0 30 .............................................. GCAAACCGAGTTAGAAATCGATTCGATGGT 2287 46 100.0 30 .............................................. GAGTTCTCAGTCATCTGTCTTTTGTCGCCA 2363 46 100.0 30 .............................................. GGCATAAAATGATTTATGAAGTCTATTTGA 2439 46 100.0 30 .............................................. ACGCCTGTCACTATGTCGTCGTATATTTCT 2515 46 100.0 30 .............................................. ATTTCATCTATTTGCCTTAACTCACTATCA 2591 46 100.0 30 .............................................. TTACAAAAGCAGAAGAATCTGATTCTTTAT 2667 46 100.0 30 .............................................. GGTTTGCTTGAGCAGTTCTTCTCTGTGAAC 2743 46 100.0 30 .............................................. TAGAAGAAAAGCATCGGCAAAATGTTGCAT 2819 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 37 46 99.7 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATCACACCAATTTTGCCATGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //