Array 1 1866-445 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHPYA010000008.1 Phocaeicola vulgatus strain MSK.8.24 NODE_8_length_129282_cov_142.711, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1865 33 97.0 33 ................................T CATACCAATATGAACCGTTAGCAATGTTTGCAT 1799 33 97.0 33 ................................G TCAACAATCATCTCAAGACGTGAATACCCAACA 1733 33 97.0 35 ................................C CACTGAGGACGAAACTGCGAAAGCATACAAGAAAA 1665 33 97.0 33 ................................C GTAAAAGTGATAGAGCATATTACAGACGATGCT 1599 33 100.0 36 ................................. AAAAGTTAGAAAGGCTATTGGATGAGCTGAAAGAAC 1530 33 97.0 34 ................................T GTTATTCCTATAAGTGATGAAGAATTGGAGGACT 1463 33 100.0 32 ................................. GTGCTCCTGCCCTTTGGGCGAAGTACGGATTT 1398 33 100.0 32 ................................. CGTTAAAGGAGGCTGTAAAAAAGGGAATTAAA 1333 33 97.0 33 ................................T TTGGCTCATAAGATTTACTCTGGCAAGGGAGAA 1267 33 97.0 33 ................................T CTCAATGTCCATTTCCGCAAAATTTTTATCGTA 1201 33 100.0 32 ................................. AACAATACTCCGTCTTCTAATGCTTCAACGAG 1136 33 97.0 32 ................................C TACACGAAATGAATCCCGTGGAAATAACTGAT 1071 33 100.0 33 ................................. ATGTAACGAAGATCCTTTTTATTGTTCGGTTCT 1005 33 100.0 32 ................................. AAAGAGAATGTAAGTAGGATGAGTAATGTATA 940 33 97.0 33 ................................C CTCTTGCCGTGGCAACACCTCTATCACCAGCCG 874 33 97.0 34 ................................T TTTAGATTGAAACATTTCTTAGAGGCCTTATGCC 807 33 97.0 32 ................................C TTGTATGTGGAACTCCTTATTCTTCTTCGCCT 742 33 100.0 33 ................................. CTTATCTCTAGCTTATCTTTAGAGATCACAATG 676 33 97.0 33 ................................G ATGCCATGTATCTGTATGACTGCTACTGCGAGG 610 33 97.0 33 ................................C GAGGAAACCGCACAACTCGAGCACCTCAAGCAA 544 33 100.0 32 ................................. TCGAATAGCGTCCAAACGGGGTGGCCGATTTC 479 33 93.9 0 ....................A.........G.. | TA [456] ========== ====== ====== ====== ================================= ==================================== ================== 22 33 98.0 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAAAGTATTTCTTCGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : ATTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAACTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTACTATACTATCCCTTGTTGTTTATTTGTTATATTATTGATTATTAATGTGTTGTTATCTGTTTGTATCGATTGTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCT # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //