Array 1 165261-165770 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQV010000003.1 Enterobacter cloacae complex sp. I7 contig_0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 165261 28 100.0 32 ............................ GACGACGCCCCGCTGCCGGAGTGGCTGCCGGT 165321 28 100.0 32 ............................ GACATTCTTCGCGCTAAAGAGCCAGTTTAACG 165381 28 100.0 32 ............................ TGTTATATAGTTGATTTCCGTTCTAAGAAATC 165441 28 96.4 32 ....................T....... TTCTGGCGCACCAAAACTGGGAGGCTGACCAG 165501 28 100.0 32 ............................ AGTCTCTCCCAAACGATCGCATTGCTCGACGG 165561 28 100.0 33 ............................ CACGTACCAGATTACTGGCTCTGTGGAGCAAGA 165622 28 100.0 32 ............................ GGAGAAATGCAGCGCTCCAGTAACACAATCTG 165682 28 96.4 32 ...........................T TTCCGACAGCCGTGAAAATGCACGGTCAATCT 165742 28 78.6 0 ......C....A...T.....A.GC... | C [165768] ========== ====== ====== ====== ============================ ================================= ================== 9 28 96.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTTCACGGTTTGCATAAGCTGTTTGGTGGCGTGGGCTTTATCAGCGGCATGCTGGTAGAGAAAGGGCTGCCGGGATTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCACCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGAGTGGGTGAAACGTTCGCGCTCGATAAGGTTGGGGCATGGGCGATTGAAAGTCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGGTTTGCGTTAGGGAAAGCGCCTGCGTGGCAATAAAGCTGGGTACTGAAAATATAAGGGTCTCTGGACTTTTTTTATTGGTGGTTTTTAAGTCTTTGATTTTATTAAGCGGAATTATTTGTGATGAAAAAAGGGTTTAAGGGGTATTTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : ACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTAGCGCTTACCAGGCCTACGATCGAACGTTTATTGCTTATGCGAGGACCAGATCCCCCTGCGGGTGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATATTCCCCGGAAACCACTTTCGTTTTACAGCAGCCGCACACGCCCGCACGGCAGGCCGCGACTACCGGCACCTTGTTGCTTTCCAGCGCTTCCAGGAGCGTGGTGCCCACGCGACCAAAGAAGGTCTGTGCGGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCAAGCGCTCTAACTTCTTTCTCCACGATATCCATGTACGGCGCCGGGCCGCAGGTCATCACGGTACGGTTCGCAATGTCCGGCACGCTTTGCAGCAG # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1523-2457 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQV010000041.1 Enterobacter cloacae complex sp. I7 contig_0041, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1523 28 100.0 32 ............................ TTGAGGGGCTTTCCGCTAGCCGATTCACCAGC 1583 28 100.0 33 ............................ CCCGCTTTCACTTGCCCGGTAACGCCTGTTTTC 1644 28 100.0 32 ............................ TGTTAATGGCGAAGAAGATTCCAAACGCGGAA 1704 28 100.0 33 ............................ ATAAATGAGCGGAATTCGTCACCTGCGAACCGG 1765 28 100.0 32 ............................ TTACGCTAATTTCTTATACACGCGAGGCTCAT 1825 28 100.0 33 ............................ AGCCGGTGGCGAACTTCCCACGGCTTTTCGCTG 1886 28 100.0 32 ............................ CGATTCAGATGACCAGACGATAATCGACACGG 1946 28 100.0 33 ............................ AAGTATACCGGACATGCACCGGCTGTTACTGAT 2007 28 100.0 32 ............................ AAAACGGCGCAATAAAATACTGTTTTTATATA 2067 28 100.0 32 ............................ GGGTCATGCTCGGTTGCGCTCAATATAGACTA 2127 28 100.0 32 ............................ GGTTTAAGCCCTATTTGCCCCGTACAATCATT 2187 28 96.4 33 ...............C............ AGCAAGCGTAGGTGTGCTGGGACTGATAAGGGT 2248 28 100.0 33 ............................ ATCAACTTATCGCTTCCAGCGCGCGGCGCGTGT 2309 28 100.0 32 ............................ GTTACTGACCGTATAATCAAGGTTGTCTAGGT 2369 28 100.0 33 ............................ AGGTTGTGTACAGGGGGCAGCAGCTTGAGTGAT 2430 28 78.6 0 .........T...........AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.4 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCAAATCACTCCCGCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCATATCTGGAAGAGGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAAGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGCTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTGACGGGGCTACTCCATGACATTACGCATTCTATGGCCACAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAATTCACATTATTTCCTGAGTGTAGTTTGTGGCGTCTGGGGTAGGCCCCTGACTTGACCCTTTTTCTTTGATGTCAATGTAAAGTATTGATTTATGTGATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : AAAACTACCCCTCTAAAACATTTACCTTGCCTATTCAAAACTCAATACTATCAAACCCACGCTCTCTATTTTTCACAATAAATAAAAAACTCATTCACGCGCCAATTATATTCCAAAAAATATATTATTCATAAAAATAATACATTGAATGGGAAAGTGATTTTTCGCTTTATTATCACGATAATTACTCTTCATTTGATACTCGTCACATTTGTTTTCATCTTATTTTCGATAACATACCGTTCATTCAACACCTTGAAATAAAAGCTCTTGCCATGTCCGTAAACAGCATCACCTCTACAGATTTAAAAACCATCCTGCATTCAAAGCGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGCGGACGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCGATGCGCGAG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 11954-12825 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQV010000041.1 Enterobacter cloacae complex sp. I7 contig_0041, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11954 28 100.0 33 ............................ CCGCGCTTGCCGACGGGCGTGCCCGTCGCCGGG 12015 28 100.0 32 ............................ ACCAGAAACCGTTGGACTGGTCGACCTTTTTT 12075 28 100.0 32 ............................ AACCCCGACAGTCAGATGCGTGCGCTTCAGAA 12135 28 100.0 32 ............................ ATTGATTACCTGCTTCGCCCCCTGCTTACCGA 12195 28 100.0 33 ............................ ATTACCTGACCACAAGCAGATCTGAGTATCTCG 12256 28 100.0 32 ............................ ACCACCGGCGTCTGCGTATCTGAGTTATTCGA 12316 28 100.0 32 ............................ GGACGATACGCGGCCACTTACAGACTTTGTGA 12376 28 100.0 32 ............................ CCGCGCAAGCTCGGTGGGTATCAATCCTTGGT 12436 28 100.0 32 ............................ ATACCGACCCCCTTTCGCGTTTGCGGAAGAGA 12496 28 100.0 32 ............................ AACCCAAAGAGTTTAAAACGCAGGACCAGGAC 12556 28 100.0 32 ............................ GCAGACGTCACTATCAGAAAGCCTTCCGCTTC 12616 28 100.0 32 ............................ ATTACCAGCGAATCTTCAGCATGAACGACGTT 12676 28 92.9 32 ..........T.....A........... TTCAATCGAATTAACCGACAGTACCGGGAGTA 12736 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [12761] 12796 28 75.0 0 ........T..A....A.......AGCT | CC [12816] ========== ====== ====== ====== ============================ ================================= ================== 15 28 97.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGTATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGTTTAAGTATAGCCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTTGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : TGGAACGAACGGCCAACTAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //