Array 1 14087-14237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIAY01000032.1 Halomonas sp. 19A_GOM-1509m N527DRAFT_scaffold00027.27_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14087 29 100.0 32 ............................. ACCTTCTAGATGGGGCATCATTTTTGCCGAGT 14148 29 100.0 32 ............................. GACAAGACGCCCTAACGACCTATCTTCAGGAA 14209 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 CCGATCCCCGCACGGGCGGGGATGAACCG # Left flank : GGCGATATTCAGCCGCCACCGCCAGCACCCGATGCGGTGCCGCCTGCGATTCCCGAACCACCTTCGGTTGGCGATGCTGGGCACAGGAGCGGATAAATGGCGATGCTCGTAGTGATTACAGAAGCCGTGCCGCCACGTCTGCGTGGCAGGTTGGCGGTATGGCTCTTGGAGATTCGAGCCGGTGTTTACGTTGGTGACGTTAGCAGGCGCATCCGCGAAATGATCTGGGAGCAGGTAGAAGCGTTAGCTGAAGATGGCAACGTAGCAATGGCCTGGGCCAGCAATCATGAATCCGGCTTTGAATTTCAAACCTATGGTGAAAACCGCCGAGAACCCGTCGACCATGACGGGCTACGCTTGGTGCGCTTTGTACCACCACAAGTTAACTAGCTGATTTTATTTGATCTTTAATAATTTAGCCTGATTAAAAAGTAAGCAAAATAGCTGGTAGATTTTTTATCTGCTATTTTCTTCTTGTAGATCAATTATCTACAACTAGT # Right flank : CGTGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCACGGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCACGGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6-827 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIAY01000015.1 Halomonas sp. 19A_GOM-1509m N527DRAFT_scaffold00010.10_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 ............................. TTGGGCGACCAAATGCCTCTTGGCCCCTCCAT 67 29 100.0 32 ............................. GGTACTCGCGATGTCTCGTTAGTAATTCGCGC 128 29 96.6 32 ....C........................ CCAGCTTTTTACAGAGAACGTTGAAAGCATCC 189 29 100.0 32 ............................. TCGTAAATAGCTTCTCTGACTGTTGATATCCG 250 29 100.0 32 ............................. GCGCCGGTGTTGGTCAGTGCACTCTTAATTTG 311 29 100.0 32 ............................. CACTGGAGACAGATTGGCGCATTGCTGAGCGC 372 29 100.0 32 ............................. ATTACGCCACCAAAGCCCCATGGAAGCTTGGG 433 29 96.6 32 .........................G... CCTGACGGCTACGCCGACGACAAGATGCGTCG 494 29 100.0 32 ............................. GTGATTGAGAAGTCGCGCCGTATCGGCCTTTC 555 29 100.0 32 ............................. AATTATTATGGCTGCAGTGTTCACCACAATAT 616 29 100.0 32 ............................. CCTCCTTTCAAGTCAAGGTTGGTACGTACCGT 677 29 100.0 32 ............................. ATCTGAACGGCGTCCCAGTTTTCGGGCAGTAC 738 29 100.0 32 ............................. TCGTCGTTATCGTCATTTCCCCCGGTGCGTAG 799 29 96.6 0 ..............A.............. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.3 32 CCGATCCCCGCACGGGCGGGGATGAACCG # Left flank : TCGCTC # Right flank : GTTCAAAGTGGCGTCAAAAAGATCATTTAGATGGTCGGGAGTTAGATTTAAAGTATGTGCCCTTGGCCGCTGCGCGGTGCTTTCGCGCCGGGCCGCCGTCGCGGGTGCGCTAACGCTTACGCCGCGCTACTCGAAATGTGCATGCCCCGGAATAGGTGGCAGAAGGTGTTGCCATATAGGCCGCTCATAAAGCATCGCCAGCGGCCAAGGCTTATTAAACTGTGTGCTCGTGGCACCGCTGCGCTTGAGGCTTATCACGCCTACTCGAAATGTGCATGAACCGTCATAAGTGGCGAGCATTGAGTCCTTCTGCCGGTTTCTGGTTGGCTAACTGCTATTAATGGCAAAGCCTACTTAGTTTTTGTGCGGCGTTGAGATATACTTATTTAGCTAGACGTCAAATTAAGCTATATCACTAACGTTAAAAGACATGGATCTTTCCCGCATGGACACTCATCACTTAGCGTCTGAACCGAAAAGCGTGGCCGCTCGTCAAGAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCACGGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGATCCCCGCACGGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.60,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //