Array 1 540710-543236 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATHP010000002.1 Klebsiella pneumoniae strain KLP00213 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 540710 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 540771 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 540832 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 540893 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 540954 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 541015 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 541076 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 541137 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 541198 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 541259 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 541320 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 541381 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 541442 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 541503 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 541564 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 541625 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 541686 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 541747 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 541808 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 541869 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 541930 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 541991 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 542052 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 542113 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 542174 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 542235 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 542296 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 542357 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 542418 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 542479 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 542540 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 542601 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 542662 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 542723 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 542784 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 542845 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 542906 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 542967 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 543028 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 543089 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 543150 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 543208 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //