Array 1 16476-9742 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVPT01000043.1 Geodermatophilus chilensis strain B12 NODE_43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 16475 29 100.0 33 ............................. AGCGGCTACACCAACGCCGGCACCCTGCGCCAG 16413 29 100.0 32 ............................. TGGACGCGCTGCTCGGTCTCGGCCTGGGTGGG 16352 29 100.0 32 ............................. AGGTCAGGGCGGAGGGTCACGTCTTCTCCTAT 16291 29 100.0 32 ............................. TTGCCGCCGTCGGCGATGGTGAGGCCGTTGCC 16230 29 100.0 32 ............................. CGAAACGAGGAAGGGCGCTCCGCGCCCCGCAC 16169 29 100.0 32 ............................. CGGTAGGCCAGCGGCCCGAAGTTCGCCGTCGT 16108 29 100.0 32 ............................. CTGAGCGTGACCTTGCGGCCGGTCGCGTGGGG 16047 29 100.0 32 ............................. CCATCCGGCGACGCCGTAGCGGTCCCGAGCGG 15986 29 100.0 32 ............................. CGCGACGACCAGGATGCCGACGCCAACCCCGG 15925 29 100.0 32 ............................. GATGCGGTCCTTGCGGCCCTTGCCGTTGCGCA 15864 29 100.0 32 ............................. GGCGATGCCGCGGGCTTCCTCTGTCCAGGACG 15803 29 100.0 32 ............................. TACTCGGTGTACGGGCAGTTGGATTTCGCGTC 15742 29 100.0 32 ............................. CGCCGCGACACGCGCATGGACGAAGTTCGACG 15681 29 100.0 32 ............................. GCACCTACCGGGACGTCCTCGGCCGGCCCATG 15620 29 100.0 32 ............................. GGCGTCAACAGCCACTTCGGGACCGGCGGGGA 15559 29 96.6 32 ..........G.................. GGCCCGCGCAGTAAACGCCAAGAGAAGCGCCG 15498 29 100.0 32 ............................. AGCTTTCGGCATCACTCGCAGCGAACGCCCGC 15437 29 100.0 32 ............................. AAGGAGTATCGCATGGAACCGATCGAAGAGTG 15376 29 100.0 32 ............................. GTGAAGTTCGCGTTCTCGCTCGCGTACCGGGC 15315 29 100.0 32 ............................. CCGCCCCGGCGGTGCGACCCGTAGCAGCACGA 15254 29 100.0 32 ............................. CCACGCGTACCGCTTCCCGTCGATGATGCTCG 15193 29 100.0 32 ............................. CGAGGAGCCGTCATGAGCGCCGGTGCCGAGTG 15132 29 96.6 32 ............................T TGATCGGCAGCGGCTGCTTGCCCGACGCGATG 15071 29 100.0 32 ............................. TTGGAGCCGTTGGCGACGACGACATACAGGCC 15010 29 100.0 32 ............................. AGGGCCATGCCCACGGCCCGGTCCAGGTCGTC 14949 29 100.0 32 ............................. CGGGCCTGGATGGCGCGCACGTCGTCGCGCTC 14888 29 100.0 32 ............................. CACTACCTCGTGGAGGGCGGCCGCACGGTCGG 14827 29 100.0 32 ............................. ATGTCCCGGTCGAGCGCGTGGACCGGGCCCAT 14766 29 100.0 32 ............................. AGCCGCGACGGGTCCGGCGACGTCGTGGCCAT 14705 29 100.0 32 ............................. GTCTCCCGGATCCTGGCCAAGCCGGACGAGGA 14644 29 100.0 32 ............................. CGGAAGGAGGCCAGGTCGTAGGGCCAGCGGCT 14583 29 100.0 32 ............................. TCCTGCGGCCGCACGGACTCCGCGGCCACGGC 14522 29 100.0 32 ............................. CGGACGCCGACCCCGTCACCCATGATCCGGTG 14461 29 100.0 32 ............................. GACGCCTCGTGCGCCCCGGACAGCCGCAGAGT 14400 29 100.0 32 ............................. ACGATGATCGTGCAGGGCTACCGCCGCTGCCG 14339 29 100.0 32 ............................. GCCTTGGGGATGCCCTCCCACTCCGGTGGGGC 14278 29 100.0 32 ............................. ACCTACGAGTTGAAAGCGCAGCTGCGCACGGC 14217 29 100.0 32 ............................. AGCCTGCTGCTCGACACCCAGGCCGTCGCCGA 14156 29 100.0 32 ............................. ATGGCCGACCGGATGCGCGCCTACCGCAACGC 14095 29 100.0 32 ............................. GGCTGGCTCGAGCGGGCCGCGGCGCGGGTCGG 14034 29 100.0 32 ............................. TCCTCGACCAGCTCGACGCGCTGCGGGCCGCT 13973 29 100.0 32 ............................. CCTGGCCGTCAGCGTCCAGGGGGACGGAGCCG 13912 29 100.0 32 ............................. TCGACGGCCACGACGGCGGTGTGTTCACCACC 13851 28 96.6 32 .....................-....... AGCCAGTGCACGTCCAGGAGCAGGCCCAGAAC 13791 29 89.7 33 ..........................GAT GCCGCCCCTCACCGGCCCCGTCGTCGCCGCGAC 13729 29 100.0 32 ............................. AGGACGTCAGGCTTCCGGGACAGGTCCAGGCT 13668 29 100.0 32 ............................. CGGGCGAACACCTCGCCGAGCAGGTCGGCGAT 13607 29 100.0 34 ............................. TCGCGCGCCACTCTCGCCAGCGAGCGGTCGGGGC 13544 29 100.0 32 ............................. TCGGTGGGGAACTCCCGGTCGGGCGCGTCGTC 13483 29 100.0 34 ............................. TCGCGCGCCACTCTCGCCAGCGAGCGGTCGGGGC 13420 29 100.0 32 ............................. TCGGTGGGGAACTCCCGGTCGGGCGCGTCGTC 13359 29 100.0 32 ............................. AGGCCCGTGAATTCGTTCTCCACCAGCCCCGC 13298 29 100.0 32 ............................. TGCGTCCACAGCCCGGAGCGGCTGTCCGGGCG 13237 29 100.0 32 ............................. CCGCCGGATGTGCGCCGGGACGTAACTCGCGG 13176 29 100.0 32 ............................. GTCGCGCCGGCCAGGGGGTGGTCGAGTCGGGC 13115 29 100.0 32 ............................. CCGGTCACCACATACAGGGCCTCCACGGTCAG 13054 29 100.0 32 ............................. TCGGCGTAGTTGGCGGTACCGCTGTCGCGGTT 12993 29 100.0 32 ............................. GGCCACTACGACCCTGACCTGTTCGACGTCGT 12932 29 96.6 32 .....T....................... TGCGTCATCGGACAGCGGCCCCACGCCGCAGA 12871 29 100.0 23 ............................. CACCGCCAGCGGACGAGGACGCC Deletion [12820] 12819 29 79.3 32 AC..CG.A..T.................. ACAGCCCGTTCGGCGCGGCCAGACAGATAGCC CCT [12804] 12755 29 100.0 32 ............................. GGCGTCCAGATGTTGTTGACGATCCAGTCGCG 12694 29 100.0 32 ............................. GGCGTCGTGCGCTTCGGGGCGAACGACGGCCG 12633 29 100.0 32 ............................. AGGCCGCGGCTGTGGAAGGCGTTCATGACCCG 12572 29 100.0 32 ............................. AGCTTGTCCGAGGCGGCGTAGCTCAGCTCCTC 12511 29 100.0 32 ............................. CGCCCCCAGGTCGCGGTGCCGGTCGCGGACGC 12450 29 100.0 32 ............................. TCGTCGGTGATCTCGATGCGGCTCACGGTCGG 12389 29 100.0 32 ............................. GCCGGCCGCACCGGCACCCGGGTGGGCCCGCG 12328 29 100.0 32 ............................. CCGTTCTGCACGTCGGCCAGCAGCTCGAGGTA 12267 29 100.0 32 ............................. TACGACGGGACCAGCGTGCTGGCCGGCTGCAA 12206 29 96.6 32 .....A....................... TCGGCCACGGGGCTCTGACCAGGGGCGGGGTA 12145 29 100.0 32 ............................. CTCTACTGGCGCGGCCGGGACGTGCTCGACGT 12084 29 93.1 32 .........A..................T CGGCTGGCTCGGCGGGCGGGTCCTCAACGATC 12023 29 100.0 32 ............................. CTCTACTGGCGCGGCCGGGACGTGCTCGACGT 11962 29 100.0 32 ............................. GCGTCCTCCCCGCCCTGGTCGGCGGGGTACTG 11901 29 100.0 32 ............................. CGGGCGAGGGCCTCGGGCAGGCGGGTCTGGTA 11840 29 100.0 32 ............................. CGGTGGGTGCGTTGCGACAGCTCTCTCCGAGC 11779 29 100.0 32 ............................. GCGCGAGTGAACACGGGGGCTCCTTAGTTGCA 11718 29 100.0 31 ............................. CGGTCGAGGCTGCCTGCGCGGTCTCCCGCCT 11658 29 100.0 32 ............................. TCCTCGCCCTGCCCTACGCGGACCGGCCCGGA 11597 29 100.0 32 ............................. GCCGAGCAGGAGCGGCTGGGGTTCTGGCAGGA 11536 29 96.6 32 ............................G TACCAGACGAACCCGCAGGAGATGCTGTGGGC 11475 29 100.0 32 ............................. CGGCCCTCCCACGAGTCGATGAGGGTGCGGGC 11414 29 100.0 32 ............................. TTGCCGGACGGCAGCTTCCGGATGTACGCCAC 11353 29 100.0 32 ............................. GTTTCCGGCCCGACGAGGGCGAATGACGGGCG 11292 29 100.0 32 ............................. GGGCGCACCGGCCTGCCCGGGCCGCTGTGCAA 11231 29 100.0 32 ............................. CGCCAGCTGGGCATCTACAGCGGCCACCGGAT 11170 28 96.6 32 .....-....................... TCGATGAGTGGGAAGGCAGCGACTACTCCGGC 11110 29 100.0 32 ............................. GGTCCCCCAGGTCCGTGGAGCAGACAGCCAGG 11049 29 100.0 32 ............................. AGGGCCGCGGTGCTCGAGCTGGCGGATCAGCT 10988 29 100.0 32 ............................. GACATCTACCTGTCAGACCAGAACACCGGCGC 10927 29 100.0 32 ............................. TGGCCGACCAGCCCACGCCGCGGCCTACCCCG 10866 29 100.0 32 ............................. TGCGCGGACTGCCGACAGGGGTACGACGACAA 10805 29 100.0 32 ............................. TGAACCCGCAGGGCCCGGGCGGTCTTGAGGGT 10744 29 100.0 32 ............................. CGCAGCCGGAACCTGCCCAACGACATCTGGCA 10683 29 96.6 32 ..............T.............. TCCGCATGCACCGGAAGCGGACGCCTTGAAGG 10622 29 96.6 32 A............................ TGGCGTCCCCGAGGCGGACGGCGGCACATCGC 10561 29 96.6 32 ............T................ TTCCCGAGCTTCCTGCGCCAGCGGGCGCATGC 10500 29 100.0 32 ............................. GGCCGGCGGGCGCCGCGCGCGTCGTAGGCGTC 10439 29 96.6 32 .C........................... CGCTTCCGCAGGCCGTCGCGGCCGATGCGCTC 10378 29 100.0 32 ............................. CGCGCGTGCAGCACTGCCGTGTCCAGCAGCTC 10317 29 100.0 32 ............................. TGGCCTTCCGGGGTGCGGACGTCGACTAGGGG 10256 29 89.7 32 .....G.T....................G CCGTCTCCCACTTCTCCGCCTCCGACACCGGC 10195 29 100.0 32 ............................. CGGCGGGAGGCACGTAGCCGGGCTCTCCGGGC 10134 29 96.6 32 ...........................T. ACACCCACCGCCGCGCGGTCGTCCCGCTTGCC 10073 29 96.6 31 .....................A....... ACGCGTCGGGCACCGCCGGGGACGTCGACGC 10013 29 100.0 32 ............................. CGCCCGCCGAGCACCGCGCTGATGGACCCGAC 9952 29 100.0 32 ............................. TCCCGCATCGACGTCGTCTACGTCAAGATGCA 9891 27 89.7 33 ...........--..A............. AAGCACGACGAGTCGGCGGTGCAGGGCATCCAC 9831 29 96.6 32 ............................T CTCCTAGGCCCCTGCCGGGCCTTCCACTCCTG 9770 29 75.9 0 ................ATCCT..C..G.. | ========== ====== ====== ====== ============================= ================================== ================== 111 29 98.8 32 GTGCTCCCCGCGCCCGCGGGGGTGAGCCC # Left flank : GACGAGGCCGACGGTACGGTCGCCAGCGGCTCGGGATACGGGACCGACGACTCCGGTTTCGGCGTGGACTTCTGATGGTCGTCATCGTGCTGTCTGCCTGTCCCGCAGGCTTGCGCGGGCACCTGACCCGGTGGCTGCTCGAGATCTCCGCCGGGGTCTTCGTGGGGCATGTGTCCACGCGTGTTCGTGACCTGCTCTGGCTGAACGTTTGCGAGATGACCAAGGGCGGTCGCGCACTCATGGTCTTCGGGGTTCCCGGAGAGCAGCGGATGGACTTCCGCGTCCACAACCACCACTGGACGCCGACCGACTTCGACGGTCTGACGCTGATCATGCGGCCGGCGTCGGACCCCACGCCGGCGGCGACCCAGGAGCCCCCCTCAGGCGGGTGGAGCGCCGCGAGCAAGCGGCGGAAGTTCGGTGGACGGCCCATCCGCTAGCGTCGCCGGGGACCAAATCGGAAGTCGGCGCTTCCCGGCTGAATGGGCAGGTCAGGAAGT # Right flank : GTCACGTCGACCAGCACCTTGCCGACGGCACCGTCCTCCACCGCGCGGTGTGCCTGCGCGGTCTCGGGGAGGGGGAAGACGTGCAGCGGCAGGCCGGCGTCCTCGCCGACCCGTACCGCGCCGTCCAGCACGGCGGCGTTGACGTCCTCCACGCCGATCGACTTGGCGCGCTCGGGCTCGGTGTAGACGAGGACGAACTGCCAGCGCGCGTTCGGGACCATCTGCGCGCGCACCGGCACGGTGACCTCCGCGCCGCCGTCGTCGGCGTACATCGCCACGGCCCCGTGCAGGCCGATCACCTGGGCGTCGACGGCGGCGTTGGTGGCGGCGGAGACCTCGACGATGGTGTCCACGCCCTTCGGGGCGACCTTGCGCACCTCGGCGACGACGTCCTGCTCGCGGTAGTTGACGACGTGCGAGGCCCCGGCCGCCGCGGCCAGCTGCGCCTTGCGCGGGCCGCTCACGGTGGCGATCACGGTGGCGTCGGCCCAGCGGGCCAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCCGCGGGGGTGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCGCCCGCGGGGGTCAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [26-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //