Array 1 130189-126261 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGJVF010000001.1 Klebsiella pneumoniae strain INTEC_OZEC4 NODE_1_length_379378_cov_123.325787, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 130188 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 130129 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 130068 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 130007 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 129946 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 129885 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 129824 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 129763 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 129702 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 129641 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 129580 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 129519 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 129458 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 129397 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 129336 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 129275 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 129214 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 129153 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 129092 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 129031 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 128970 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 128909 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 128848 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 128787 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 128726 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 128665 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 128604 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 128543 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 128482 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 128421 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 128360 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 128299 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 128238 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 128177 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 128116 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 128055 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 127994 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 127933 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 127872 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 127811 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 127750 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 127689 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 127628 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 127567 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 127506 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 127445 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 127384 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 127323 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 127262 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 127201 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 127140 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 127079 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 127018 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 126957 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 126896 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 126835 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 126774 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 126713 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 126652 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 126591 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 126530 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 126469 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 126408 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 126347 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 126289 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //