Array 1 237644-238065 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPML01000002.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 237644 30 100.0 35 .............................. CTTATGAATGCATTTAATATAGCAGATAATGACGA 237709 30 100.0 36 .............................. ATATGACAAGATGCTTCAATGGGTTAGAGAAGGGGG 237775 30 100.0 36 .............................. AGTACAAAATTATTGAATTATCTCCACCACATGAAC 237841 30 100.0 35 .............................. CAAAATATAAAAATAATAATATAATAAGAATAGAA 237906 30 100.0 36 .............................. TTTGGAAAACAAAATCCACATTATTGATTCTATTAT 237972 30 100.0 34 .............................. CAGATAAGTTTTTCATAGAATAATCCTTTACAGG 238036 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GTTTTCCTTCCTCATAGGAGCTATAAAAAC # Left flank : CACCCATCAAAAAGCGCTTCAATTTTAGGCTTTATTTCTTGCTCCATAATCATTTCGAGCTTTTTCTGCCTTTCTTCAAGCTTTCTTTGCCCTTCTTCAAGCTTTCTTTGCCCTTCTTCAAGCTTTCTTTGTCCTTCTTCAAGCTTTCTTTGCCCTTCTTCAAGCTTTCTTTGTCCTTCTTCAAGCTTTCTTTGTCCCTCTTCAAGATTCCCTTGTCCACGTTTCAATTCATCTAAATCAGATGTAACTTTACTTACTTGTACCGCAATCAGCTCAAGCAATTCCCTGTCAGTCATCATTAACCACCCTTCTTTGAAGTTTAAAGAAACGACGAACTTTTCCTTTGCAAATGATTATATCATTTCCATTCTTTAAAAATCAATCACCAAAATAGAAAATAAACCATAGGGAAAATAAACCAGAAACCATAGGGACAGTCCGAAACCACATAGGAGCTATAAAAACTTATTCCGCTGGTTACAAGTCCAGATAAAGCAGAG # Right flank : CCTGTGGAAACAGCATAAAATCTGTATTTATATTTTACTGCATATTGGATGGTATTGCAATGAAAATCTTAAAAGCCTTGTAAAATCAATAAAGGGAATGTTGTCGACCCCCGGGGGTTTTTGCATTACCGGAGGTCGACAACATAAAAATTAAAAAAATTAAAATATTTTTACATATTTATCCATTTTGTTGATTTCCGAAATACATTCAATACATCCGAAGCCTTGTGCGTTTTTACTGCCAATTCCACAACTGTAAGCAATATCTACTATTTCATCATCTCCTTCTATAATAAATCCGCCGAGATAGGCATCATAGGGCCAGCGTTTATAAAAAGACACAACTTTTTTTATTTTGTTTTCATCTAAAATTTTCACATCAAGTTTACCACAGTAATCATCTTTATAAAAGGCTTTATATTTATAAAGCAGATTGTTTTTTATACTTATAATAAAATCCGTATCTTGTGGACTGTGAAAGGCCATGTTTTTTGTTTGGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCTTCCTCATAGGAGCTATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 21176-24297 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPML01000007.1 Petroclostridium xylanilyticum strain SK-Y3 Scaffold1_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 21176 30 100.0 36 .............................. ATAATATCAAAGATGTATTCAATGCAGTAATACAGT 21242 30 100.0 35 .............................. TACATGAATAAGCTTATCGAAGCAAACAAGCAATA 21307 30 100.0 36 .............................. TTAGCTGAATAACGCGGTCAAATAAGCCGTGTCGAA 21373 30 100.0 35 .............................. TGGAGTTAAAGTTTCCGAACAGACGACTTCCGTTG 21438 30 100.0 36 .............................. ATAATAAGGTTTTCGCCTTCATAAAATAGGGCGTAA 21504 30 100.0 36 .............................. ATCTGTTTTTCTGTTATCTCGATCATGCTTAATCAC 21570 30 100.0 35 .............................. ACAGTAAGGGTTACGGAAGTTCAGTTGATTAACAC 21635 30 100.0 36 .............................. ACCCTCAATTTCGCGGCTGTGACTTCCTGAACGGGG 21701 30 100.0 36 .............................. TAAATCTTTTCTTTAAGTTTGAATGGTTCCATTATT 21767 30 100.0 36 .............................. TTACAAGCAATTCATACGGAATTTCAAGGGCTGCGC 21833 30 100.0 35 .............................. ATAAGACTAAAAATATTAAAGACATAGGAATAAAG 21898 30 100.0 36 .............................. TCCAGCAGTATGTCGTTCCCTGGGCATGTTGCCTTT 21964 30 100.0 36 .............................. AAGTGTAGACCAGTACTGATTGATAATATAATACGT 22030 30 100.0 35 .............................. TAGAGTCTTTTGACTGCTGCAACAAGCATTTTCCT 22095 30 100.0 36 .............................. ACGCCCGGCACTGCGGGAAGCGCCGCTGGATCCGTT 22161 30 100.0 36 .............................. GAAAAACATACTCTCTCAATTTTCTGCCCATCAGGA 22227 30 100.0 35 .............................. ACCACGCTCCAAAGCAATTCCACATTATAAAAAGC 22292 30 100.0 38 .............................. ATAAAATAAAATGTATCTCAATTTTAGAACCTGATTCC 22360 30 100.0 36 .............................. ATATCTGAACATGAGAAGTTGCAAAAGATTGAAGCT 22426 30 100.0 36 .............................. CCGCAACACGTTGGGCGTACTACAAAGGTGTGCTTA 22492 30 100.0 34 .............................. TTTTTACCGTATTTTGAAGTAAATTATAGCCCCT 22556 30 100.0 36 .............................. ATCTTTAAAACAGGTTTACCATTCGACCCTACTTTA 22622 30 100.0 35 .............................. TTTTTTATCAAATATAACTTTGATCTTAACTACCT 22687 30 100.0 36 .............................. GTTAATGGAAGAATGCAAATCAGAACAGGAAGCGCA 22753 30 100.0 37 .............................. TTAAACACAAAACTAACTGACAAATTGGAGTCTACAA 22820 30 100.0 36 .............................. AAAATTGCATTGGCTGTATAATCATTGCAGAATTTA 22886 30 100.0 36 .............................. GTTTTAACCATTGTTTAACCTCCCTAAATTATATTA 22952 30 100.0 36 .............................. TTGTATTACATTGTAAATAAATGGAAATAATATATA 23018 30 100.0 37 .............................. GGCTTCATTGCTTTTAACTCCGTTTCCTCTGTTATTG 23085 30 100.0 36 .............................. TGAACTCCCTAAGGTTTATTATTTACCTAGTGAACA 23151 30 100.0 35 .............................. TTGCTCCAGCACGTTATAAAAACTATAGCGTGCTG 23216 30 100.0 35 .............................. TTAAGTACCACAGATAAATCAACACCTGTTAAATC 23281 30 100.0 36 .............................. CAAAAAAAACCTCCATTCTTAAATTAATCAAGCCTA 23347 30 100.0 35 .............................. AAAATCAAACAGTGAAGGCAGATTCTTTAAAAAAC 23412 30 100.0 36 .............................. TCGAATTTAAGAGTAAGGTCTGCTGCGAGCATGGCT 23478 30 100.0 36 .............................. TCTGTGACGCCTGATCCATATCCTTATAAGCAGTTT 23544 30 100.0 35 .............................. TCCGGATTTGATGCTTTTACCACAGCAATGCTTAG 23609 30 100.0 35 .............................. TATGCAAGCCATTTTCCTATATGTTTTCTTCTTAT 23674 30 100.0 38 .............................. ATAACAGAAAACAGATGGAAATATGTTGCAGCGGATTA 23742 30 100.0 37 .............................. GCGACACAGGGAGAAGTGGAAGTATTGACTAATGGTA 23809 30 100.0 37 .............................. ATTGCAGGAGTAAAAGGTTACAGCGAATGGCTAAAAG 23876 30 100.0 35 .............................. TCTTGCTAAAAAAATAGAATTATATAAAACCGAAA 23941 30 100.0 36 .............................. TTTTTTTCTCTCTTTGAGCATTTTGGTTGGTTTCAA 24007 30 100.0 35 .............................. ACTTTTAAAACAGGTTTACCATTCGACCCTACTTT 24072 30 100.0 36 .............................. CGTCTGATATGTTGGCACCTATAACTGATGCTATAA 24138 30 100.0 35 .............................. TTGAAAAGTACGCAAATATATAAAGAAATGGATAA 24203 30 100.0 35 .............................. AAGACAGGAAAAAGGTTATTTTCTGCCATTTATTA 24268 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 48 30 100.0 36 GTAGAACCGAAACATACGATGTATTGAAAT # Left flank : CCTTTTAACGCGGAGGAAAATTTATGAGTACCCAGAAAAATTATAATTATGCTTTTTTATTCTATGATGTTGGTGAAAAACGAGTTCAGAAAGTGTTCAAAATATGCAAAAAATACTTTAAACATCATCAAAAGTCTGTGTTTCGTGGACATATTACTCCTGCAAATCTAATAAAGCTAAAAGGAGAGTTAAATAAAATCATCCGTAAAGATGAAGATTATATCAGCATTATCAAGTTGGTCAGCACGTCAGATTTTGAAGAAGAAACACTGGGGATATGTATCAAGCAATCAGAGTCGTTATTCATTTGACTTTTTCCAACCACAAGTGTAAAATTGACATATAATATATTGGTGTAACCATTACTATAAACAGGTTAGATGGTTTATACAAAAGTAAGAGGCATTTTATTAAGTGCACTTGGAAAAAATAGTAGCAAAATTAGAAATCATGCGGTATCATATACTATAGTTGCAGTACAAAACCTGCATTTTATTTTG # Right flank : TATAATGTACAATAAGAAGCTTAAAACGCTAAGTTCTCTTGAATTTATATCTACCGGTCAAAACGTGATACTCGCAGGGAATCCCGGTACAGGTAAAACCCATCTTGCGATAGGATTGGGCATAAAAGCTTGCCTTAAAGGCTATAAGGTGCTTTTTACGACAGTGCCTATACTAATAAACCAGCTTAAAGAGAGCCGTTCAGAGAAGAACTTACGGCTTTTGAAAATAGGTTTGAGAAATATGATCTGGTTATAGCAGATGAACTAGGTTACATTTCCTTTGATAAGGAAGGATCTGAACTGCTGTTTACCAATCTATCATTAAGGGCCGGGAGAAAATCAACAATTATAACTACTAATTTATCATTTGAAAGGTGGGGAGAGATATTTAAGGATCCTGTCATGACAGCTGCAATGATTGACAGACTAACTCACAAAGCTTACATAGTGAATATGAACGGTAACTCATTCAGGCTCAAAGAGACCAGAGAATGGATGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAACCGAAACATACGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA //