Array 1 127609-126788 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL883582.1 Gemella haemolysans M341 supercont1.1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    127608	    35	  77.8	    30	TA...-..C...CA.........C...T........	TGCATAACGTTCTCTATCTTTTACATTTCT	T [127595]
    127542	    36	 100.0	    29	....................................	TCAGAGCACAAGTTTATAATGCTATTATT 	
    127477	    36	 100.0	    30	....................................	TGATGTTAACATAGACTATTTACACAAACT	
    127411	    36	 100.0	    29	....................................	ATAAATTTGTTAGTAGAATTCAAAATTTA 	
    127346	    36	 100.0	    30	....................................	TGATGAAACAAACGCTTATATTGGAACAGC	
    127280	    36	 100.0	    29	....................................	GGTTACTGGTGAAGGTATTGTTTATAGCG 	
    127215	    36	 100.0	    29	....................................	TGGTCCATGAATCAAATTATTTAAACGAT 	
    127150	    36	 100.0	    29	....................................	AAAAACAACGGCAAATTAAACTCCTTTTG 	
    127085	    36	 100.0	    30	....................................	TCTCTTCAATGCCTTCAGTCGCAACTTTAA	
    127019	    36	 100.0	    30	....................................	TTGATTCCCATGTAGAAAAGCAAATAATCA	
    126953	    36	 100.0	    29	....................................	GAATTTGTCTATATTAGTAAAGATATAGA 	
    126888	    36	 100.0	    29	....................................	ACATTTAATTCTATCTACTGCATAACTAA 	
    126823	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  98.3	    30	GTTTAGTAGAATTCAAAATTTACATATCTCTCAAAC	                              	       

# Left flank :   GCCCTACTTCTATGAAAGCTGGAGTAGATGTCGTTAGTAGTTTTGATGACTTCGATTTTAAAACATTAGTATTAGGAAGCATGTTCGAACTTGGACCAAATGAAGTTAACTACCACGCTGAAGTTGGTGAATACATCTCTAACAAAACTAACGATATAAATTTAGTAATCAGCGTAGGAGAACTTGCCGAAAACATTACTAAACAAATTAAAAATGACAAAATAAAAACACTACACTTCCCTACTACAGCAGAAGTAAGTGAATATTTAAAAAATAACAAACATAAAAACGAAGTTATCCTATTAAAAGCAAGTCGATCAATGAAATTAGAGACGATTATTGAGGAGATAACGAAGTAACAAAATATTAGAGGGCGTTTACGTTTATTGAGATTAACGTGAACCCCTTTTTTTATACCCTCTTCTATTCGGTAAAGTTTATGTAAACAAAAAATAAGATTATAGATCAAATAACACTCAATGTTATCTCATCAATAATCT
# Right flank :  CTCAAATTGAGATTCGGAGTTGAAATTTTGAATTTAGGTATAAAAAAATGGACCGACACCGATCCAGCCAAAAGGCAATTTAGATAAAATCTTTATTTGAACTTGAATGTAAATTTTGAATCTACCTATATTATACAAGTATTTTTTCAAAATTGCAACATTATATTTCACAATTATCTCTGTCAAAAATATAAACCTTTTCTATGTAATTATCATCAGATATATTATTAAATTGTTGGTATTCTATATTTATAATACTAATTTTATTGACACAAGCTTCCTTATATATTTCTTTTATCTCTTCATCTGTGAAAACGTTATGAAGACCAACTATAAAGATAATATTTATTCCACATGATTGTACAAGTACTTTCAAAAATTTAATGAATTTTTCTACAATATCATCATCTTCTACATGAATTCGAAAATCACCTAATTTCAATAGAGAATTTATATCTATTTCTTCACCTTGTTCTACTTCAAATGAACTATTAAAAATT

# Questionable array : NO	 Score: 3.17
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTAGTAGAATTCAAAATTTACATATCTCTCAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.64   Confidence: LOW] 

# Array family : NA
//