Array 1 177616-178651 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FNDY01000008.1 Paenibacillus naphthalenovorans strain PR-N1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    177616	    32	 100.0	    36	................................	ATACCAGTAGTGGTATGGCGTCAGGCAGCAGAGGCA	
    177684	    32	 100.0	    34	................................	AACGGTGCTTGCAGCATCGCTTCATGCTCGGCAA  	
    177750	    32	 100.0	    35	................................	ATGAAACGTGCCAAACTTAAGGAGAAATGGGAAAA 	
    177817	    32	 100.0	    36	................................	GCAATCCCTAAACACTGGATGCGGTTTTGCTCGATG	
    177885	    32	 100.0	    36	................................	CGTTAAGTGATGCTTACCCGCTGTTAGAGGCAGAGT	
    177953	    32	 100.0	    35	................................	CCGTTTGAAGTCATCATCTGCTATCCGCGCAGAGG 	
    178020	    32	 100.0	    36	................................	CGCGATATCAACGCATTTACACCGATCCCGCCTATA	
    178088	    32	 100.0	    35	................................	ATTAACTCCTGCTAGTTTAGGAATTTTTTGCATTT 	
    178155	    32	 100.0	    35	................................	AATCAAAGTTTATGATCGACACCGCGAATAACCTT 	
    178222	    32	 100.0	    35	................................	ATCACACTGCAACATTTCAACCCATACCTTTAAAA 	
    178289	    32	 100.0	    34	................................	GATTAGCGAACGACACTTTAATAGTCAAAGAAAT  	
    178355	    32	 100.0	    34	................................	AACGCTGCATACAAATCGTCGCCGTAAGTGTAAT  	
    178421	    32	 100.0	    35	................................	TATGACAGTTACGTAACACGCCAGGCTGATATGGC 	
    178488	    32	 100.0	    34	................................	CCAAAAGTGGCAAAAAAACGCTTGTCAAACCTGA  	
    178554	    32	 100.0	    34	................................	CTTTAAGGGCGTACCTTTTAAGGGGTGGTCTTAA  	
    178620	    32	  96.9	     0	.......................A........	|                                   	
==========	======	======	======	================================	====================================	==================
        16	    32	  99.8	    35	GTCGCATCCCATGCGGATGCGTGGATTGAAAT	                                    	       

# Left flank :   GCGGACGCATGGATTGAAAATTGTGAAAGTAGGTGATCGGGCTGCTGGTATTGGTTACGTATGATGTAAGCACAGTTAGCAGTTCAGGGCGAAGAAGACTGCGTCAGGTATCGAAAATATGCCAGAATTACGGCCAGCGTGTACAAAATTCAGTATTTGAGTGCGTTGTCGACGCCACTCAATTTGCTGTTTTAAAATTAAAGCTCCTTGATATTATTGATCAAGAACAAGACAGCCTCAGATTCTATCAGTTGGGCCATAATTACAAGAGCAAGGTAGAACATATTGGTGTGAAAGAGTCTTTTGATTTGGAAGGCCTTCTAATTTTATAGTGCGAATGTGTAGTGCACAAGGTTTTCCGGGGACATTCGCACCGGGAAAATGGTTAAAATCCCCATTTTGTTTACAGTTTTATCCATATTATTTCAGAAATTCATTGATTTACGCGTATTTTTGATCATAAAAATGGAGTTTCAGGCATATTTGAATCAAAAATCGCT
# Right flank :  TACCGCAGATTAGAAGGGTTATGAAACTATGATTTGCTTCGTTATCCACCCAGTAGCGCGAAGAGCCAAAACTATTCACTTTTTGTATAATTCATGTTACTGCTAACGCGTAGTGTCGGCGGTTGACGGTGTAATTTGTCTTGCTGGTGCCGTAGATCAGACAGTGTGTACATACCTTGTTGGCCGGGCGGCACCACTGGAGAAACGATAAATCTCGTCGATCGCACCATCCGAAAAGATATCATGCTCCGCACCGGCGGTAAGCCATATGCCGCTGGATGTAAGCGCCAGCCTGTGCGCGGTCGAAGTGCGATTGCACTGCAGTTCAATACATTGGCGGATCGCAGCGTTAGCGTGAAGCGCAAGACGCTCCCACAACTCGCTTTGTCCTCTCGTCCGCATCCATACATACAAATAAGCCCTTCAGACTTTGTCTGGGGGGCTTATTTGCGTACATCCGCATCCAACCCATCTATAAAGTGATTTTTTGGGAAAGCGGT

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCATCCCATGCGGATGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [7,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCATCCCGTGTGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.00,-5.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [10.05,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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