Array 1 20006-12229 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFOO01000016.1 Acinetobacter baumannii strain 4300STDY7045885, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 20005 30 96.7 30 ............................C. GAGCAGTATGCCGATTTAATGAATCCTGAA 19945 30 93.3 30 ............................TG ATATGAAACCTACAAATGATCTGTTAACCG 19885 30 96.7 30 .............................C AACCATTAGGCGGCATATCGCAATATGTAG 19825 30 96.7 30 ............................G. ACCATTGTTCCAAGAAGTACTCTTCAATAG 19765 30 93.3 30 ............................TA GAAATTCTTTCTTAGCCCATAAAGGCAAAT 19705 30 93.3 30 ............................CG CTGCTTTTGAGTTGGATAAGTAAGATATAC 19645 30 96.7 30 .............................G ATGCATCAAGAACGAACTGTTGAAGATGTG 19585 30 100.0 30 .............................. TCACTAAAATATCTAACTCAGTTCTTAAAG 19525 30 96.7 30 .............................A TCGGTTAAAGATGCAAATGGTGAACAATCT 19465 30 93.3 30 ............................GC TTTGATCAGTAACTCAATGTATGAGTCATC 19405 30 100.0 30 .............................. ATCGAAAAATGGGAGTATAACCATGCATGA 19345 30 100.0 30 .............................. CGCAAAGATCATTAATCAAGGTCATGATGC 19285 30 96.7 30 .............................A AGAAATCAAAGACTTATCTGGTCAGGTTGA 19225 30 100.0 30 .............................. TGGTCAAAATCATTCACACAACCATTCACA 19165 30 96.7 30 .............................A TCGAAGAAAAGGACCGTCGGTTCTTAGTGC 19105 30 96.7 30 ............................T. CAGAATCACCGCATCGAGAACGTGTAATTA 19045 30 96.7 30 .............................A CATTCAATTTGATCAAACGGAATTCATGTT 18985 30 100.0 30 .............................. TAGATAATCATCACCCAGTATTAAATGTGG 18925 30 100.0 30 .............................. TGCGTTTTTGAAAGGTCGCCATTGTTTAAA 18865 30 93.3 30 ............................TC AAATGAACATTATTTGTGGTGAAAATGGGG 18805 30 96.7 30 ............................T. CTAAAAATTCAGGCTCATTACTAACGCCCT 18745 30 100.0 30 .............................. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 18685 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 18625 30 96.7 30 ............................T. GCCGCAATATCTCAGAAAAGCAAGATCAGT 18565 30 100.0 30 .............................. GATAGTATCTTGGGCGCAGGCAAAAGGAGC 18505 30 93.3 30 ............................GC CTTGTCGCTGCTCTTGCCGGATAATCGTTC 18445 30 96.7 30 ............................C. GCATGGATCTATTACGACATCTGTACAGTT 18385 30 93.3 30 ............................TA ATTGAAAATGCTCAATATGTAAAAGATTTT 18325 30 100.0 30 .............................. GGTGTAAACGACAATCTCTTAACCTTCCCC 18265 30 93.3 30 ............................TA AAGGTTCCTACTAACTACAATCCAGCAACA 18205 30 93.3 30 ............................TA ACGGTGCACGAACTGTTATTAGCGGCAAAA 18145 30 93.3 30 ............................TA CAGACCGAACACTTCTAAATAACTATGCCG 18085 30 96.7 30 ............................G. TACGTCTACGGTACGTGGTTAGCATGATTT 18025 30 93.3 30 ............................CC TGCCGTTAATTCACCGCTTGGGTGATAGAA 17965 30 93.3 30 ............................GC AGGGAAAAGTATAGCTTTAGATATATCCCA 17905 30 93.3 30 ............................TG TAAATATTCGTTTTTATTTTTTTAGGTCAT 17845 30 96.7 30 ............................T. GCTCTAAGCATTCCGAAGCAAGGAAATGTG 17785 30 100.0 31 .............................. CACATTTTGGGATGGCAATAGCATTATTTGT 17724 30 93.3 30 ............................TG ATCTTTGCAACCAAGCATTCAACGAATCCA 17664 30 96.7 31 .............................A TTTCATGCTTATGTGCTAAATTCATATTTCA 17603 30 96.7 30 ............................G. GTATTACCGTCATTTTTATGATGGTACATG 17543 30 96.7 30 .............................G TATCCGTTGCATTAATCGCTTTGGCTCAAA 17483 30 96.7 30 ............................G. GTTGTAATTTCGCTTGTATTGATCATTGCC 17423 30 96.7 30 .............................C ATACCCCATATAACGGTTATTGTAGTTGCT 17363 30 93.3 30 ............................TA TGATCTATACATTACAACAAGCAACACAAA 17303 30 93.3 30 ............................TC AATGTTATATCACATTAGATTAACAAAACA 17243 30 93.3 30 A............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 17183 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 17123 30 96.7 30 ............................G. CGGTCGAATGTCTGGGACTTTTTTGTTATA 17063 30 96.7 30 .............................A AGGCATACACCCAGTAGAAGATAAACAAAA 17003 30 100.0 30 .............................. ATATGTGCGTAACCGAGCAAGCTTGTCACG 16943 30 100.0 30 .............................. ACCGAAAGATGACAAAAAGCACCCTAAGGT 16883 30 96.7 30 .............................A GTGAAAAAAGCTGACAGCAAAATAAACTCA 16823 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 16763 30 96.7 30 ............................G. CCAAGTCTTAAAGATGTTCAATGGGCAATG 16703 30 96.7 30 .............................A TCGAATCAAAATATTAAAGAGTTACGTCAT 16643 30 96.7 30 .............................A TTCGTGTTGACCAGGAATTAAAAGACACTT 16583 30 96.7 30 ............................C. CAAAGTATTTAACACGGTTGTTAGCAGGAT 16523 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 16463 30 96.7 31 ............................T. GGTGTTGAACAATGCTTAAGTGAAATCACAA 16402 30 93.3 30 ............................TA TATCAATCTTGTTAAGAGAAGCCGCATCAT 16342 30 96.7 30 ............................G. GATGTGTATGTTCTATTAGTGGTGTAAATC 16282 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 16222 30 93.3 30 ............................TA GTCCCGAAATTTCAGTAGGTGGCTCATAGC 16162 30 96.7 30 .............................A TCCCGCTTAGAACTTGTAAACAAAATTCTG 16102 30 93.3 30 ............................TA ATACACCAATCCCGCTTAGAACTTGTAAAT 16042 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 15982 30 100.0 30 .............................. CATCATTGCAGTCTTATAAGAGCCAGGCTG 15922 30 96.7 30 .............................A ACTGCATAGATGACCATTAGAGACATCCCC 15862 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 15802 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 15742 30 93.3 30 ............................TA CTAACTGTAAAACAGAAGACTTGCCAACTT 15682 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 15622 30 96.7 30 .............................A TGGCATTTGCTGCTGACGGGGATTTCGACT 15562 30 96.7 30 .............................A ATCAAAATCGTGGCAGATAACAAAGCGATC 15502 30 93.3 31 ............................TA ATCTCGGTATTTACGCCAAGGGCGCTATTCA 15441 30 100.0 30 .............................. GATCTACCCTTTGAGCTAGATAAAACTTTT 15381 30 96.7 30 ............................T. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 15321 30 93.3 30 ............................TG AGTATCGCAAATCAAACATTGCCAAGCTTT 15261 30 96.7 30 ............................T. AGATAAAGCAGGGGATAAAGGGACGTTAGC 15201 30 93.3 30 ............................TG TAATACTAGAATCTGTATATGCCAGCTCTT 15141 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 15081 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 15021 30 93.3 30 ............................TC TACAAAGGCAATCTGGCTCTTCAATTCGTG 14961 30 93.3 30 ............................TG ATTGCGGACATTTAGTCTGCTGTATTTCTT 14901 30 100.0 30 .............................. CGTGATCAAACCACATGCCTTCATCTTCAT 14841 30 96.7 30 .............................C TTTAAGCGCAAACGAACAGCATCAAGATCA 14781 30 93.3 30 ............................TG TTTCATCTGTCTTGATAGCTTCCCCCATAA 14721 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 14661 30 96.7 30 ............................T. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 14601 30 96.7 30 .............................G TTGCTACTGAATTAGTTGTTATTGCTAAAA 14541 30 96.7 30 ............................T. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 14481 30 100.0 30 .............................. TAATATAGCTTCTTCCAACTACAATATATT 14421 30 93.3 30 ............................TA TTTGCTACGCCACCAGCCATACCTAGAAGC 14361 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 14301 30 96.7 30 .............................A CGTCAATTCAAACGTAAAAAGCTACTGAAG 14241 30 96.7 30 ............................G. CAGTATTACTCCACACTTTTTATATTTCAC 14181 30 93.3 30 ............................TG TACCTCATCAATAAAAATAACTGATGTTTC 14121 30 100.0 30 .............................. AAAATCAACCCGTATTAATACCGAATGCAC 14061 30 93.3 30 ............................TA ATAAAGAGGTTTTTAACTGGTATGAATCGA 14001 30 96.7 30 ............................C. CATGACGATGCTTTTCTAACAAAGTCATCC 13941 30 93.3 30 ............................TG AAAAACGTAACGCTGAATTGCAGGCTAAAA 13881 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 13821 30 96.7 30 .............................A CTGAAGTGAAAATTGTTCATTAATGGTTAT 13761 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 13701 30 96.7 30 ............................T. AGCCGTTTGGACTTTACCAATCTATATTTA 13641 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 13581 30 96.7 30 .............................A TAGAATTAAAACCACGTTGATAATATAGGT 13521 30 93.3 30 ............................TG ATGCGGGTTGTCCACCAGTTATGACTACTT 13461 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 13401 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 13341 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 13281 30 96.7 31 .............................A AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 13220 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 13160 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 13100 30 96.7 30 ............................T. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 13040 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 12980 30 100.0 30 .............................. CATCGAAATTTAGTTCTAATTCTTTAATTT 12920 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 12860 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 12799 30 100.0 30 .............................. TGAATTAATACGGCTTACTGCAATTGGTTG 12739 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 12679 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 12618 30 96.7 30 ............................T. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 12558 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 12498 30 96.7 30 ............................T. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 12438 30 93.3 30 .......T.....................A CGTGAACAATTGTTTTAGCTTTGAACATTA 12378 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 12318 30 90.0 30 A......A.........T............ TTTGATCTTTACTTATTCTCGCTTCAAACA 12258 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 130 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //